RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 ZNF826PQ6ZT77 177 aa4.52□□□□□ -1.69
ATG4A-204ENST00000372246 SPATA12Q7Z6I5 190 aa4.52□□□□□ -1.69
ATG4A-204ENST00000372246 Q8N7P7 452 aa4.52□□□□□ -1.69
ATG4A-204ENST00000372246 OR10D3Q8NH80 312 aa4.52□□□□□ -1.69
ATG4A-204ENST00000372246 APOBEC3DQ96AK3 386 aaPredicted RBP4.52□□□□□ -1.69
ATG4A-204ENST00000372246 SGK494Q96LW2 274 aa4.52□□□□□ -1.69
ATG4A-204ENST00000372246 SSBP3Q9BWW4 388 aaPredicted RBP4.52□□□□□ -1.69
ATG4A-204ENST00000372246 HES7Q9BYE0 225 aa4.52□□□□□ -1.69
ATG4A-204ENST00000372246 LOC105371242A0A075B767 164 aa4.52□□□□□ -1.69
ATG4A-204ENST00000372246 TRAV3A0A0B4J244 114 aa4.52□□□□□ -1.69
ATG4A-204ENST00000372246 CTXND1A0A1B0GTU2 59 aa4.52□□□□□ -1.69
ATG4A-204ENST00000372246 ZNF716A6NP11 495 aa4.52□□□□□ -1.69
ATG4A-204ENST00000372246 LINC00473A8K010 186 aa4.52□□□□□ -1.69
ATG4A-204ENST00000372246 PMS2P5A8MQ11 134 aa4.52□□□□□ -1.69
ATG4A-204ENST00000372246 C22orf46C9J442 243 aa4.52□□□□□ -1.69
ATG4A-204ENST00000372246 K7EP13 123 aa4.52□□□□□ -1.69
ATG4A-204ENST00000372246 MLNRO43193 412 aa4.52□□□□□ -1.69
ATG4A-204ENST00000372246 CRYGCP07315 174 aa4.52□□□□□ -1.69
ATG4A-204ENST00000372246 CCL4P13236 92 aa4.52□□□□□ -1.69
ATG4A-204ENST00000372246 KITLGP21583 273 aa4.52□□□□□ -1.69
ATG4A-204ENST00000372246 GPR6P46095 362 aaPredicted RBP4.52□□□□□ -1.69
ATG4A-204ENST00000372246 AMTP48728 403 aa4.52□□□□□ -1.69
ATG4A-204ENST00000372246 GFRA1P56159 465 aa4.52□□□□□ -1.69
ATG4A-204ENST00000372246 CCL7P80098 99 aa4.52□□□□□ -1.69
ATG4A-204ENST00000372246 XP32Q5T750 250 aa4.52□□□□□ -1.69
ATG4A-204ENST00000372246 KCNIP4Q6PIL6 250 aa4.52□□□□□ -1.69
ATG4A-204ENST00000372246 Q6ZS46 218 aa4.52□□□□□ -1.69
ATG4A-204ENST00000372246 Q6ZSR3 168 aa4.52□□□□□ -1.69
ATG4A-204ENST00000372246 MRPL21Q7Z2W9 205 aaKnown RBP4.52□□□□□ -1.69
ATG4A-204ENST00000372246 WDR86Q86TI4 376 aa4.52□□□□□ -1.69
ATG4A-204ENST00000372246 MRPL52Q86TS9 123 aaKnown RBP4.52□□□□□ -1.69
ATG4A-204ENST00000372246 C17orf82Q86X59 251 aaPredicted RBP4.52□□□□□ -1.69
ATG4A-204ENST00000372246 ABHD12Q8N2K0 398 aa4.52□□□□□ -1.69
ATG4A-204ENST00000372246 Q8N3U1 123 aa4.52□□□□□ -1.69
ATG4A-204ENST00000372246 STPG3Q8N7X2 389 aa4.52□□□□□ -1.69
ATG4A-204ENST00000372246 OR5AU1Q8NGC0 362 aa4.52□□□□□ -1.69
ATG4A-204ENST00000372246 OIT3Q8WWZ8 545 aa4.52□□□□□ -1.69
ATG4A-204ENST00000372246 LINC00479Q96M42 142 aa4.52□□□□□ -1.69
ATG4A-204ENST00000372246 PSMG3Q9BT73 122 aaPredicted RBP4.52□□□□□ -1.69
ATG4A-204ENST00000372246 QTRT1Q9BXR0 403 aaKnown RBP4.52□□□□□ -1.69
ATG4A-204ENST00000372246 TIMM8BQ9Y5J9 83 aaPredicted RBP4.52□□□□□ -1.69
ATG4A-204ENST00000372246 CDIPTO14735 213 aa4.51□□□□□ -1.69
ATG4A-204ENST00000372246 DEGS1O15121 323 aa4.51□□□□□ -1.69
ATG4A-204ENST00000372246 PSPNO60542 156 aa4.51□□□□□ -1.69
ATG4A-204ENST00000372246 OR2H2O95918 312 aa4.51□□□□□ -1.69
ATG4A-204ENST00000372246 TYMSP04818 313 aa4.51□□□□□ -1.69
ATG4A-204ENST00000372246 GRPP07492 148 aa4.51□□□□□ -1.69
ATG4A-204ENST00000372246 CELA3BP08861 270 aa4.51□□□□□ -1.69
ATG4A-204ENST00000372246 SSTR5P35346 364 aa4.51□□□□□ -1.69
ATG4A-204ENST00000372246 LTBRP36941 435 aa4.51□□□□□ -1.69
ATG4A-204ENST00000372246 ZNF83P51522 516 aa4.51□□□□□ -1.69
ATG4A-204ENST00000372246 SERF2P84101 59 aa4.51□□□□□ -1.69
ATG4A-204ENST00000372246 AESQ08117 197 aa4.51□□□□□ -1.69
ATG4A-204ENST00000372246 MRPL49Q13405 166 aaKnown RBP4.51□□□□□ -1.69
ATG4A-204ENST00000372246 RNPS1Q15287 305 aaKnown RBP4.51□□□□□ -1.69
ATG4A-204ENST00000372246 WDR74Q6RFH5 385 aaPredicted RBP4.51□□□□□ -1.69
ATG4A-204ENST00000372246 TMEM14EPQ6UXP3 125 aa4.51□□□□□ -1.69
ATG4A-204ENST00000372246 Q6ZR03 302 aa4.51□□□□□ -1.69
ATG4A-204ENST00000372246 GGNQ86UU5 652 aa4.51□□□□□ -1.69
ATG4A-204ENST00000372246 TUSC5Q8IXB3 177 aa4.51□□□□□ -1.69
ATG4A-204ENST00000372246 MKXQ8IYA7 352 aa4.51□□□□□ -1.69
ATG4A-204ENST00000372246 RNF138Q8WVD3 245 aa4.51□□□□□ -1.69
ATG4A-204ENST00000372246 FAM168AQ92567 244 aa4.51□□□□□ -1.69
ATG4A-204ENST00000372246 LEAP2Q969E1 77 aa4.51□□□□□ -1.69
ATG4A-204ENST00000372246 APH1AQ96BI3 265 aa4.51□□□□□ -1.69
ATG4A-204ENST00000372246 SLC35E1Q96K37 410 aa4.51□□□□□ -1.69
ATG4A-204ENST00000372246 IL36GQ9NZH8 169 aa4.51□□□□□ -1.69
ATG4A-204ENST00000372246 FZR1Q9UM11 496 aa4.51□□□□□ -1.69
ATG4A-204ENST00000372246 ZNF318Q5VUA4 2279 aa4.51□□□□□ -1.69
ATG4A-204ENST00000372246 MDFIC2A0A1B0GVS7 189 aa4.51□□□□□ -1.69
ATG4A-204ENST00000372246 CBY3A6NI87 242 aa4.51□□□□□ -1.69
ATG4A-204ENST00000372246 H0Y8G0 127 aa4.51□□□□□ -1.69
ATG4A-204ENST00000372246 TMEM250H0YL14 139 aa4.51□□□□□ -1.69
ATG4A-204ENST00000372246 OR10J4P0C629 311 aa4.51□□□□□ -1.69
ATG4A-204ENST00000372246 OR9G9P0C7N8 305 aa4.51□□□□□ -1.69
ATG4A-204ENST00000372246 C3orf79P0CE67 100 aa4.51□□□□□ -1.69
ATG4A-204ENST00000372246 SRP14P37108 136 aaKnown RBP4.51□□□□□ -1.69
ATG4A-204ENST00000372246 TPPP2P59282 170 aa4.51□□□□□ -1.69
ATG4A-204ENST00000372246 RPL31P62899 125 aaKnown RBP4.51□□□□□ -1.69
ATG4A-204ENST00000372246 PCOLCEQ15113 449 aa4.51□□□□□ -1.69
ATG4A-204ENST00000372246 MLANAQ16655 118 aa4.51□□□□□ -1.69
ATG4A-204ENST00000372246 TMEM183BQ1AE95 376 aa4.51□□□□□ -1.69
ATG4A-204ENST00000372246 COLCA1Q6ZS62 124 aa4.51□□□□□ -1.69
ATG4A-204ENST00000372246 OR10P1Q8NGE3 313 aa4.51□□□□□ -1.69
ATG4A-204ENST00000372246 NEUROG1Q92886 237 aa4.51□□□□□ -1.69
ATG4A-204ENST00000372246 PINX1Q96BK5 328 aaKnown RBP4.51□□□□□ -1.69
ATG4A-204ENST00000372246 ANAPC16Q96DE5 110 aa4.51□□□□□ -1.69
ATG4A-204ENST00000372246 STARD4Q96DR4 205 aa4.51□□□□□ -1.69
ATG4A-204ENST00000372246 NRN1Q9NPD7 142 aa4.51□□□□□ -1.69
ATG4A-204ENST00000372246 SLC35D1Q9NTN3 355 aa4.51□□□□□ -1.69
ATG4A-204ENST00000372246 C19orf25Q9UFG5 118 aaPredicted RBP4.51□□□□□ -1.69
ATG4A-204ENST00000372246 NAT8BQ9UHF3 227 aa4.51□□□□□ -1.69
ATG4A-204ENST00000372246 IGLV3-32A0A0A0MS00 114 aa4.5□□□□□ -1.69
ATG4A-204ENST00000372246 KIR2DS1A0A191URI9 304 aa4.5□□□□□ -1.69
ATG4A-204ENST00000372246 A0A1W2PS18 150 aa4.5□□□□□ -1.69
ATG4A-204ENST00000372246 C20orf202A1L168 122 aa4.5□□□□□ -1.69
ATG4A-204ENST00000372246 C10orf142B7Z368 130 aa4.5□□□□□ -1.69
ATG4A-204ENST00000372246 SNAI2O43623 268 aa4.5□□□□□ -1.69
ATG4A-204ENST00000372246 CGAP01215 116 aa4.5□□□□□ -1.69
ATG4A-204ENST00000372246 IGHV3-48P01763 117 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms