RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 A0A1W2PPC1 479 aa13.18□□□□□ -0.3
COL5A1-201ENST00000371817 PSMB11A5LHX3 300 aa13.18□□□□□ -0.3
COL5A1-201ENST00000371817 FAM181BA6NEQ2 426 aa13.18□□□□□ -0.3
COL5A1-201ENST00000371817 Q5BKY6 102 aa13.18□□□□□ -0.3
COL5A1-201ENST00000371817 FGFRL1Q8N441 504 aa13.18□□□□□ -0.3
COL5A1-201ENST00000371817 NKX2-8O15522 239 aa13.17□□□□□ -0.3
COL5A1-201ENST00000371817 RAMP1O60894 148 aa13.17□□□□□ -0.3
COL5A1-201ENST00000371817 DEFB103AP81534 67 aa13.17□□□□□ -0.3
COL5A1-201ENST00000371817 OR10J3Q5JRS4 329 aa13.17□□□□□ -0.3
COL5A1-201ENST00000371817 RPL34P49207 117 aaKnown RBP13.17□□□□□ -0.3
COL5A1-201ENST00000371817 GFERP55789 205 aa13.17□□□□□ -0.3
COL5A1-201ENST00000371817 COQ2Q96H96 371 aa13.17□□□□□ -0.3
COL5A1-201ENST00000371817 RCC1LQ96I51 464 aaKnown RBP13.17□□□□□ -0.3
COL5A1-201ENST00000371817 OR4D11Q8NGI4 311 aa13.17□□□□□ -0.3
COL5A1-201ENST00000371817 PEX7O00628 323 aa13.17□□□□□ -0.3
COL5A1-201ENST00000371817 DPM2O94777 84 aa13.17□□□□□ -0.3
COL5A1-201ENST00000371817 Q6AWC8 147 aa13.17□□□□□ -0.3
COL5A1-201ENST00000371817 CCDC144NLQ6NUI1 221 aa13.17□□□□□ -0.3
COL5A1-201ENST00000371817 SIGLEC1Q9BZZ2 1709 aa13.17□□□□□ -0.3
COL5A1-201ENST00000371817 ATXN7O15265 892 aaPredicted RBP13.17□□□□□ -0.3
COL5A1-201ENST00000371817 TNFSF14O43557 240 aa13.17□□□□□ -0.3
COL5A1-201ENST00000371817 GPX1P07203 203 aa13.17□□□□□ -0.3
COL5A1-201ENST00000371817 NANOS3P60323 173 aaKnown RBP13.17□□□□□ -0.3
COL5A1-201ENST00000371817 PKD1L3Q7Z443 1732 aa13.17□□□□□ -0.3
COL5A1-201ENST00000371817 SELENOHQ8IZQ5 122 aaKnown RBP13.17□□□□□ -0.3
COL5A1-201ENST00000371817 PATE4P0C8F1 98 aa13.17□□□□□ -0.3
COL5A1-201ENST00000371817 KIR3DL3Q8N743 410 aa13.16□□□□□ -0.3
COL5A1-201ENST00000371817 RGPD3A6NKT7 1758 aaPredicted RBP13.16□□□□□ -0.3
COL5A1-201ENST00000371817 RGPD4Q7Z3J3 1758 aa13.16□□□□□ -0.3
COL5A1-201ENST00000371817 J3QT63 122 aa13.16□□□□□ -0.3
COL5A1-201ENST00000371817 NABP2Q9BQ15 211 aa13.16□□□□□ -0.3
COL5A1-201ENST00000371817 IGKV3OR2-268A0A0C4DH90 116 aa13.16□□□□□ -0.3
COL5A1-201ENST00000371817 IZUMO1RA6ND01 250 aa13.16□□□□□ -0.3
COL5A1-201ENST00000371817 H7C1H1 209 aa13.16□□□□□ -0.3
COL5A1-201ENST00000371817 SYNGR3O43761 229 aa13.16□□□□□ -0.3
COL5A1-201ENST00000371817 CLDN14O95500 239 aa13.16□□□□□ -0.3
COL5A1-201ENST00000371817 GCHFRP30047 84 aa13.16□□□□□ -0.3
COL5A1-201ENST00000371817 LRTM2Q8N967 370 aa13.16□□□□□ -0.3
COL5A1-201ENST00000371817 A0A0G2JMM0 328 aa13.16□□□□□ -0.3
COL5A1-201ENST00000371817 A0A1W2PPB8 328 aa13.16□□□□□ -0.3
COL5A1-201ENST00000371817 KIR3DP1A8MWS1 328 aa13.16□□□□□ -0.3
COL5A1-201ENST00000371817 ADMP35318 185 aa13.16□□□□□ -0.3
COL5A1-201ENST00000371817 LOXL3P58215 753 aa13.16□□□□□ -0.3
COL5A1-201ENST00000371817 C9orf153Q5TBE3 101 aa13.16□□□□□ -0.3
COL5A1-201ENST00000371817 ATG4DQ86TL0 474 aaPredicted RBP13.16□□□□□ -0.3
COL5A1-201ENST00000371817 RNASEH2CQ8TDP1 164 aaKnown RBP13.16□□□□□ -0.3
COL5A1-201ENST00000371817 DLX4Q92988 240 aaPredicted RBP13.16□□□□□ -0.3
COL5A1-201ENST00000371817 SLC25A10Q9UBX3 287 aaPredicted RBP13.16□□□□□ -0.3
COL5A1-201ENST00000371817 NDUFS6O75380 124 aaKnown RBP13.16□□□□□ -0.3
COL5A1-201ENST00000371817 ZNF48Q96MX3 618 aaPredicted RBP13.16□□□□□ -0.3
COL5A1-201ENST00000371817 USP54Q70EL1 1684 aa13.16□□□□□ -0.3
COL5A1-201ENST00000371817 LEPP41159 167 aa13.15□□□□□ -0.3
COL5A1-201ENST00000371817 GPR6P46095 362 aaPredicted RBP13.15□□□□□ -0.3
COL5A1-201ENST00000371817 CBLN3Q6UW01 205 aa13.15□□□□□ -0.3
COL5A1-201ENST00000371817 SRP19P09132 144 aaKnown RBP13.15□□□□□ -0.3
COL5A1-201ENST00000371817 UNC119Q13432 240 aa13.15□□□□□ -0.3
COL5A1-201ENST00000371817 MRAPQ8TCY5 172 aa13.15□□□□□ -0.3
COL5A1-201ENST00000371817 FMC1Q96HJ9 113 aa13.15□□□□□ -0.3
COL5A1-201ENST00000371817 MS4A6AQ9H2W1 248 aa13.15□□□□□ -0.3
COL5A1-201ENST00000371817 YAE1D1Q9NRH1 226 aa13.15□□□□□ -0.3
COL5A1-201ENST00000371817 RPRMQ9NS64 109 aa13.15□□□□□ -0.3
COL5A1-201ENST00000371817 EPDR1Q9UM22 224 aa13.15□□□□□ -0.3
COL5A1-201ENST00000371817 ODAMA1E959 279 aa13.15□□□□□ -0.3
COL5A1-201ENST00000371817 HEPN1Q6WQI6 88 aa13.15□□□□□ -0.3
COL5A1-201ENST00000371817 TMEM186Q96B77 213 aa13.15□□□□□ -0.3
COL5A1-201ENST00000371817 CLEC1BQ9P126 229 aa13.15□□□□□ -0.3
COL5A1-201ENST00000371817 MFRPQ9BY79 579 aa13.15□□□□□ -0.31
COL5A1-201ENST00000371817 LIPT2A6NK58 231 aa13.14□□□□□ -0.31
COL5A1-201ENST00000371817 ADRA2AP08913 450 aa13.14□□□□□ -0.31
COL5A1-201ENST00000371817 SCTP09683 121 aa13.14□□□□□ -0.31
COL5A1-201ENST00000371817 TRAV30A0A087WSZ9 112 aa13.14□□□□□ -0.31
COL5A1-201ENST00000371817 LILRA5A6NI73 299 aa13.14□□□□□ -0.31
COL5A1-201ENST00000371817 C1QL3Q5VWW1 255 aa13.14□□□□□ -0.31
COL5A1-201ENST00000371817 CLDND2Q8NHS1 167 aa13.14□□□□□ -0.31
COL5A1-201ENST00000371817 VKORC1Q9BQB6 163 aa13.14□□□□□ -0.31
COL5A1-201ENST00000371817 FGF12P61328 243 aa13.14□□□□□ -0.31
COL5A1-201ENST00000371817 TSPOP30536 169 aa13.14□□□□□ -0.31
COL5A1-201ENST00000371817 RPL27AP46776 148 aaKnown RBP13.14□□□□□ -0.31
COL5A1-201ENST00000371817 REG1BP48304 166 aa13.14□□□□□ -0.31
COL5A1-201ENST00000371817 FAM219BQ5XKK7 198 aa13.14□□□□□ -0.31
COL5A1-201ENST00000371817 FAM159AQ6UWV7 190 aa13.14□□□□□ -0.31
COL5A1-201ENST00000371817 OR9G4Q8NGQ1 327 aa13.14□□□□□ -0.31
COL5A1-201ENST00000371817 GNB1LQ9BYB4 327 aa13.14□□□□□ -0.31
COL5A1-201ENST00000371817 PSME4Q14997 1843 aa13.14□□□□□ -0.31
COL5A1-201ENST00000371817 PARP14Q460N5 1801 aa13.14□□□□□ -0.31
COL5A1-201ENST00000371817 GFRALQ6UXV0 394 aa13.14□□□□□ -0.31
COL5A1-201ENST00000371817 TANC2Q9HCD6 1990 aa13.14□□□□□ -0.31
COL5A1-201ENST00000371817 LTBP3Q9NS15 1303 aa13.14□□□□□ -0.31
COL5A1-201ENST00000371817 KIAA1549Q9HCM3 1950 aa13.14□□□□□ -0.31
COL5A1-201ENST00000371817 FOXQ1Q9C009 403 aa13.14□□□□□ -0.31
COL5A1-201ENST00000371817 C6orf106Q9H6K1 298 aaPredicted RBP13.14□□□□□ -0.31
COL5A1-201ENST00000371817 HCSTQ9UBK5 93 aa13.14□□□□□ -0.31
COL5A1-201ENST00000371817 PRR14LQ5THK1 2151 aa13.13□□□□□ -0.31
COL5A1-201ENST00000371817 TRGV8A0A0C4DH27 118 aa13.13□□□□□ -0.31
COL5A1-201ENST00000371817 PGLYRP1O75594 196 aaPredicted RBP13.13□□□□□ -0.31
COL5A1-201ENST00000371817 OR52E5Q8NH55 327 aa13.13□□□□□ -0.31
COL5A1-201ENST00000371817 G6PC2Q9NQR9 355 aa13.13□□□□□ -0.31
COL5A1-201ENST00000371817 PRTN3P24158 256 aa13.13□□□□□ -0.31
COL5A1-201ENST00000371817 C1QL4Q86Z23 238 aa13.13□□□□□ -0.31
COL5A1-201ENST00000371817 SF3B5Q9BWJ5 86 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms