RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 RFESDQ8TAC1 157 aa10.64□□□□□ -0.71
GPC3-201ENST00000370818 GNPNAT1Q96EK6 184 aaPredicted RBP10.64□□□□□ -0.71
GPC3-201ENST00000370818 C20orf144Q9BQM9 153 aa10.64□□□□□ -0.71
GPC3-201ENST00000370818 GAL3ST2Q9H3Q3 398 aa10.64□□□□□ -0.71
GPC3-201ENST00000370818 PLEKHF2Q9H8W4 249 aa10.64□□□□□ -0.71
GPC3-201ENST00000370818 LIN7CQ9NUP9 197 aaKnown RBP10.64□□□□□ -0.71
GPC3-201ENST00000370818 ELOVL5Q9NYP7 299 aa10.64□□□□□ -0.71
GPC3-201ENST00000370818 FUT9Q9Y231 359 aa10.64□□□□□ -0.71
GPC3-201ENST00000370818 GFRA3O60609 400 aa10.64□□□□□ -0.71
GPC3-201ENST00000370818 GATA4P43694 442 aa10.64□□□□□ -0.71
GPC3-201ENST00000370818 PAX9P55771 341 aa10.64□□□□□ -0.71
GPC3-201ENST00000370818 EDDM3AQ14507 147 aa10.64□□□□□ -0.71
GPC3-201ENST00000370818 TDRG1Q3Y452 100 aa10.64□□□□□ -0.71
GPC3-201ENST00000370818 ZNF295-AS1Q8N0V1 137 aa10.64□□□□□ -0.71
GPC3-201ENST00000370818 TMEM252Q8N6L7 170 aa10.64□□□□□ -0.71
GPC3-201ENST00000370818 OR5C1Q8NGR4 320 aa10.64□□□□□ -0.71
GPC3-201ENST00000370818 LSM10Q969L4 123 aaKnown RBP10.64□□□□□ -0.71
GPC3-201ENST00000370818 PCGF1Q9BSM1 259 aa10.64□□□□□ -0.71
GPC3-201ENST00000370818 OR2D2Q9H210 308 aa10.64□□□□□ -0.71
GPC3-201ENST00000370818 CACNA1DQ01668 2161 aa10.64□□□□□ -0.71
GPC3-201ENST00000370818 A0A1W2PPQ1 181 aa10.63□□□□□ -0.71
GPC3-201ENST00000370818 ZFP92A6NM28 416 aa10.63□□□□□ -0.71
GPC3-201ENST00000370818 ZNF705FA8MVS1 300 aaPredicted RBP10.63□□□□□ -0.71
GPC3-201ENST00000370818 CHST1O43916 411 aa10.63□□□□□ -0.71
GPC3-201ENST00000370818 IGHV1-46P01743 117 aa10.63□□□□□ -0.71
GPC3-201ENST00000370818 ZNF705DP0CH99 300 aaPredicted RBP10.63□□□□□ -0.71
GPC3-201ENST00000370818 ZNF705BP0CI00 300 aaPredicted RBP10.63□□□□□ -0.71
GPC3-201ENST00000370818 BCL2P10415 239 aa10.63□□□□□ -0.71
GPC3-201ENST00000370818 FAM3BP58499 235 aaPredicted RBP10.63□□□□□ -0.71
GPC3-201ENST00000370818 BATFQ16520 125 aa10.63□□□□□ -0.71
GPC3-201ENST00000370818 ACTL10Q5JWF8 245 aa10.63□□□□□ -0.71
GPC3-201ENST00000370818 FAM201AQ5SY85 155 aa10.63□□□□□ -0.71
GPC3-201ENST00000370818 CENPVQ7Z7K6 275 aaPredicted RBP10.63□□□□□ -0.71
GPC3-201ENST00000370818 C11orf42Q8N5U0 333 aa10.63□□□□□ -0.71
GPC3-201ENST00000370818 NUP37Q8NFH4 326 aa10.63□□□□□ -0.71
GPC3-201ENST00000370818 PLCE1Q9P212 2302 aa10.63□□□□□ -0.71
GPC3-201ENST00000370818 PIGBOS1A0A0B4J2F0 54 aa10.63□□□□□ -0.71
GPC3-201ENST00000370818 THBDP07204 575 aa10.63□□□□□ -0.71
GPC3-201ENST00000370818 RPL30P62888 115 aaKnown RBP10.63□□□□□ -0.71
GPC3-201ENST00000370818 CLEC12BQ2HXU8 276 aa10.63□□□□□ -0.71
GPC3-201ENST00000370818 TMEM108Q6UXF1 575 aa10.63□□□□□ -0.71
GPC3-201ENST00000370818 DPPA3Q6W0C5 159 aa10.63□□□□□ -0.71
GPC3-201ENST00000370818 ZBTB34Q8NCN2 500 aa10.63□□□□□ -0.71
GPC3-201ENST00000370818 ZNRF1Q8ND25 227 aa10.63□□□□□ -0.71
GPC3-201ENST00000370818 ELOVL1Q9BW60 279 aa10.63□□□□□ -0.71
GPC3-201ENST00000370818 GCM1Q9NP62 436 aa10.63□□□□□ -0.71
GPC3-201ENST00000370818 CACNG5Q9UF02 275 aa10.63□□□□□ -0.71
GPC3-201ENST00000370818 ADGRG4Q8IZF6 3080 aa10.62□□□□□ -0.71
GPC3-201ENST00000370818 IGHV3-43A0A0B4J1X8 118 aa10.62□□□□□ -0.71
GPC3-201ENST00000370818 ODAMA1E959 279 aa10.62□□□□□ -0.71
GPC3-201ENST00000370818 DPRXA6NFQ7 191 aa10.62□□□□□ -0.71
GPC3-201ENST00000370818 RAMP3O60896 148 aa10.62□□□□□ -0.71
GPC3-201ENST00000370818 IGHV3-43DP0DP04 118 aa10.62□□□□□ -0.71
GPC3-201ENST00000370818 CDKN1BP46527 198 aa10.62□□□□□ -0.71
GPC3-201ENST00000370818 DYNLT3P51808 116 aa10.62□□□□□ -0.71
GPC3-201ENST00000370818 ACOT6Q3I5F7 207 aaPredicted RBP10.62□□□□□ -0.71
GPC3-201ENST00000370818 WFDC8Q8IUA0 241 aa10.62□□□□□ -0.71
GPC3-201ENST00000370818 ZNF808Q8N4W9 903 aaPredicted RBP10.62□□□□□ -0.71
GPC3-201ENST00000370818 NINJ1Q92982 152 aa10.62□□□□□ -0.71
GPC3-201ENST00000370818 SDSLQ96GA7 329 aa10.62□□□□□ -0.71
GPC3-201ENST00000370818 MS4A10Q96PG2 267 aa10.62□□□□□ -0.71
GPC3-201ENST00000370818 AGMATQ9BSE5 352 aa10.62□□□□□ -0.71
GPC3-201ENST00000370818 ZNF665Q9H7R5 613 aa10.62□□□□□ -0.71
GPC3-201ENST00000370818 AURKAIP1Q9NWT8 199 aaPredicted RBP10.62□□□□□ -0.71
GPC3-201ENST00000370818 GALR1P47211 349 aa10.62□□□□□ -0.71
GPC3-201ENST00000370818 RAB7AP51149 207 aa10.62□□□□□ -0.71
GPC3-201ENST00000370818 BRWD1-AS2P59051 145 aa10.62□□□□□ -0.71
GPC3-201ENST00000370818 SELENOVP59797 346 aa10.62□□□□□ -0.71
GPC3-201ENST00000370818 COL5A1-AS1Q5SY13 56 aa10.62□□□□□ -0.71
GPC3-201ENST00000370818 IL19Q9UHD0 177 aa10.62□□□□□ -0.71
GPC3-201ENST00000370818 DEFB108AA8MXU0 73 aa10.61□□□□□ -0.71
GPC3-201ENST00000370818 MGST3O14880 152 aa10.61□□□□□ -0.71
GPC3-201ENST00000370818 NUPR1O60356 82 aa10.61□□□□□ -0.71
GPC3-201ENST00000370818 YPEL1O60688 119 aa10.61□□□□□ -0.71
GPC3-201ENST00000370818 CST7O76096 145 aa10.61□□□□□ -0.71
GPC3-201ENST00000370818 HTD2P86397 168 aa10.61□□□□□ -0.71
GPC3-201ENST00000370818 TNFAIP6P98066 277 aaPredicted RBP10.61□□□□□ -0.71
GPC3-201ENST00000370818 ADIRFQ15847 76 aa10.61□□□□□ -0.71
GPC3-201ENST00000370818 TMEM241Q24JQ0 296 aa10.61□□□□□ -0.71
GPC3-201ENST00000370818 CR1LQ2VPA4 569 aa10.61□□□□□ -0.71
GPC3-201ENST00000370818 SSX7Q7RTT5 188 aa10.61□□□□□ -0.71
GPC3-201ENST00000370818 YPEL2Q96QA6 119 aa10.61□□□□□ -0.71
GPC3-201ENST00000370818 OR6C3Q9NZP0 311 aa10.61□□□□□ -0.71
GPC3-201ENST00000370818 ICE1Q9Y2F5 2266 aa10.61□□□□□ -0.71
GPC3-201ENST00000370818 RNF212BA8MTL3 300 aa10.61□□□□□ -0.71
GPC3-201ENST00000370818 CCL25O15444 150 aa10.61□□□□□ -0.71
GPC3-201ENST00000370818 SPINT2O43291 252 aa10.61□□□□□ -0.71
GPC3-201ENST00000370818 CNN1P51911 297 aaKnown RBP10.61□□□□□ -0.71
GPC3-201ENST00000370818 BSPH1Q075Z2 132 aa10.61□□□□□ -0.71
GPC3-201ENST00000370818 TRAT1Q6PIZ9 186 aa10.61□□□□□ -0.71
GPC3-201ENST00000370818 TMEM256Q8N2U0 113 aa10.61□□□□□ -0.71
GPC3-201ENST00000370818 FGFRL1Q8N441 504 aa10.61□□□□□ -0.71
GPC3-201ENST00000370818 FAM222BQ8WU58 562 aa10.61□□□□□ -0.71
GPC3-201ENST00000370818 ZCCHC14Q8WYQ9 949 aaKnown RBP10.61□□□□□ -0.71
GPC3-201ENST00000370818 P2RX4Q99571 388 aa10.61□□□□□ -0.71
GPC3-201ENST00000370818 TLN1Q9Y490 2541 aaKnown RBP10.61□□□□□ -0.71
GPC3-201ENST00000370818 CD33P20138 364 aa10.6□□□□□ -0.71
GPC3-201ENST00000370818 CHRNB4P30926 498 aa10.6□□□□□ -0.71
GPC3-201ENST00000370818 TMPRSS3P57727 454 aa10.6□□□□□ -0.71
GPC3-201ENST00000370818 TAS2R30P59541 319 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms