RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 LYRM2Q9NU23 88 aaPredicted RBP12.26□□□□□ -0.45
LMO4-201ENST00000370542 VAX2Q9UIW0 290 aa12.26□□□□□ -0.45
LMO4-201ENST00000370542 PPIAL4AQ9Y536 164 aa12.26□□□□□ -0.45
LMO4-201ENST00000370542 DNAJC9-AS1A6NH13 148 aa12.25□□□□□ -0.45
LMO4-201ENST00000370542 A8MWP6 167 aa12.25□□□□□ -0.45
LMO4-201ENST00000370542 F5H5K5 113 aa12.25□□□□□ -0.45
LMO4-201ENST00000370542 TCAPO15273 167 aa12.25□□□□□ -0.45
LMO4-201ENST00000370542 IFNA5P01569 189 aa12.25□□□□□ -0.45
LMO4-201ENST00000370542 IGHV4-38-2P0DP08 117 aa12.25□□□□□ -0.45
LMO4-201ENST00000370542 FABP4P15090 132 aa12.25□□□□□ -0.45
LMO4-201ENST00000370542 FAM57BQ71RH2 274 aa12.25□□□□□ -0.45
LMO4-201ENST00000370542 OR10A7Q8NGE5 316 aa12.25□□□□□ -0.45
LMO4-201ENST00000370542 TMEM56Q96MV1 263 aa12.25□□□□□ -0.45
LMO4-201ENST00000370542 RARRES2Q99969 163 aa12.25□□□□□ -0.45
LMO4-201ENST00000370542 SH3BGRL3Q9H299 93 aa12.25□□□□□ -0.45
LMO4-201ENST00000370542 SLC2A9Q9NRM0 540 aa12.25□□□□□ -0.45
LMO4-201ENST00000370542 ZNF391Q9UJN7 358 aa12.25□□□□□ -0.45
LMO4-201ENST00000370542 TMEM56-RWDD3S4R434 201 aa12.25□□□□□ -0.45
LMO4-201ENST00000370542 RYR3Q15413 4870 aa12.25□□□□□ -0.45
LMO4-201ENST00000370542 IGKV1-9A0A0C4DH69 117 aa12.24□□□□□ -0.45
LMO4-201ENST00000370542 A0A1B0GU03 582 aa12.24□□□□□ -0.45
LMO4-201ENST00000370542 M0R135 149 aa12.24□□□□□ -0.45
LMO4-201ENST00000370542 ZNF205O95201 554 aa12.24□□□□□ -0.45
LMO4-201ENST00000370542 LCATP04180 440 aa12.24□□□□□ -0.45
LMO4-201ENST00000370542 SLC25A6P12236 298 aa12.24□□□□□ -0.45
LMO4-201ENST00000370542 ANOS1P23352 680 aa12.24□□□□□ -0.45
LMO4-201ENST00000370542 UCP1P25874 307 aa12.24□□□□□ -0.45
LMO4-201ENST00000370542 FHITP49789 147 aa12.24□□□□□ -0.45
LMO4-201ENST00000370542 TAS2R30P59541 319 aa12.24□□□□□ -0.45
LMO4-201ENST00000370542 ERVFRD-1P60508 538 aa12.24□□□□□ -0.45
LMO4-201ENST00000370542 NUTF2P61970 127 aaKnown RBP12.24□□□□□ -0.45
LMO4-201ENST00000370542 GNB2P62879 340 aa12.24□□□□□ -0.45
LMO4-201ENST00000370542 MALLQ13021 153 aa12.24□□□□□ -0.45
LMO4-201ENST00000370542 FAM201AQ5SY85 155 aa12.24□□□□□ -0.45
LMO4-201ENST00000370542 WDR25Q64LD2 544 aaPredicted RBP12.24□□□□□ -0.45
LMO4-201ENST00000370542 BTNL3Q6UXE8 466 aa12.24□□□□□ -0.45
LMO4-201ENST00000370542 ASCL4Q6XD76 172 aa12.24□□□□□ -0.45
LMO4-201ENST00000370542 Q6ZS49 121 aa12.24□□□□□ -0.45
LMO4-201ENST00000370542 LYZL2Q7Z4W2 148 aa12.24□□□□□ -0.45
LMO4-201ENST00000370542 CMTM1Q8IZ96 169 aa12.24□□□□□ -0.45
LMO4-201ENST00000370542 ZNF799Q96GE5 643 aa12.24□□□□□ -0.45
LMO4-201ENST00000370542 TECTBQ96PL2 329 aa12.24□□□□□ -0.45
LMO4-201ENST00000370542 ATP5SQ99766 215 aa12.24□□□□□ -0.45
LMO4-201ENST00000370542 HIST1H2BLQ99880 126 aa12.24□□□□□ -0.45
LMO4-201ENST00000370542 PYGO2Q9BRQ0 406 aa12.24□□□□□ -0.45
LMO4-201ENST00000370542 AGMATQ9BSE5 352 aa12.24□□□□□ -0.45
LMO4-201ENST00000370542 IL36GQ9NZH8 169 aa12.24□□□□□ -0.45
LMO4-201ENST00000370542 TGIF2-C20orf24A0A0A6YYL0 155 aa12.23□□□□□ -0.45
LMO4-201ENST00000370542 CD300LBA8K4G0 201 aa12.23□□□□□ -0.45
LMO4-201ENST00000370542 ZNF727A8MUV8 499 aa12.23□□□□□ -0.45
LMO4-201ENST00000370542 DIRAS3O95661 229 aa12.23□□□□□ -0.45
LMO4-201ENST00000370542 RD3LP0DJH9 198 aa12.23□□□□□ -0.45
LMO4-201ENST00000370542 S100GP29377 79 aa12.23□□□□□ -0.45
LMO4-201ENST00000370542 PRSS12P56730 875 aa12.23□□□□□ -0.45
LMO4-201ENST00000370542 BPIFB3P59826 476 aa12.23□□□□□ -0.45
LMO4-201ENST00000370542 ZNF92Q03936 586 aa12.23□□□□□ -0.45
LMO4-201ENST00000370542 ACOT6Q3I5F7 207 aaPredicted RBP12.23□□□□□ -0.45
LMO4-201ENST00000370542 SNAI3Q3KNW1 292 aa12.23□□□□□ -0.45
LMO4-201ENST00000370542 SHISA2Q6UWI4 295 aa12.23□□□□□ -0.45
LMO4-201ENST00000370542 LYPD2Q6UXB3 125 aa12.23□□□□□ -0.45
LMO4-201ENST00000370542 LHFPL2Q6ZUX7 228 aa12.23□□□□□ -0.45
LMO4-201ENST00000370542 TMEM252Q8N6L7 170 aa12.23□□□□□ -0.45
LMO4-201ENST00000370542 CYB561D1Q8N8Q1 229 aa12.23□□□□□ -0.45
LMO4-201ENST00000370542 OR8B3Q8NGG8 313 aa12.23□□□□□ -0.45
LMO4-201ENST00000370542 OR1P1Q8NH06 330 aa12.23□□□□□ -0.45
LMO4-201ENST00000370542 MBD3L1Q8WWY6 194 aa12.23□□□□□ -0.45
LMO4-201ENST00000370542 FRZBQ92765 325 aa12.23□□□□□ -0.45
LMO4-201ENST00000370542 SPTSSAQ969W0 71 aa12.23□□□□□ -0.45
LMO4-201ENST00000370542 SPSB4Q96A44 273 aa12.23□□□□□ -0.45
LMO4-201ENST00000370542 TMEM18Q96B42 140 aa12.23□□□□□ -0.45
LMO4-201ENST00000370542 BSCL2Q96G97 398 aaPredicted RBP12.23□□□□□ -0.45
LMO4-201ENST00000370542 RHOVQ96L33 236 aa12.23□□□□□ -0.45
LMO4-201ENST00000370542 SPACA5Q96QH8 159 aa12.23□□□□□ -0.45
LMO4-201ENST00000370542 OR8B2Q96RD0 313 aa12.23□□□□□ -0.45
LMO4-201ENST00000370542 PSMG3Q9BT73 122 aaPredicted RBP12.23□□□□□ -0.45
LMO4-201ENST00000370542 PARD6GQ9BYG4 376 aaPredicted RBP12.23□□□□□ -0.45
LMO4-201ENST00000370542 TMEM222Q9H0R3 208 aa12.23□□□□□ -0.45
LMO4-201ENST00000370542 C3orf85A0A1B0GTC6 90 aa12.22□□□□□ -0.45
LMO4-201ENST00000370542 A0A1W2PP11 408 aa12.22□□□□□ -0.45
LMO4-201ENST00000370542 TMPRSS2O15393 492 aa12.22□□□□□ -0.45
LMO4-201ENST00000370542 XRCC2O43543 280 aa12.22□□□□□ -0.45
LMO4-201ENST00000370542 METTL15P1P0C7V9 234 aa12.22□□□□□ -0.45
LMO4-201ENST00000370542 NDUFB7P17568 137 aa12.22□□□□□ -0.45
LMO4-201ENST00000370542 PRDX4Q13162 271 aa12.22□□□□□ -0.45
LMO4-201ENST00000370542 HAGHQ16775 308 aa12.22□□□□□ -0.45
LMO4-201ENST00000370542 IQCJQ1A5X6 159 aa12.22□□□□□ -0.45
LMO4-201ENST00000370542 MPV17LQ2QL34 196 aa12.22□□□□□ -0.45
LMO4-201ENST00000370542 ZNF695Q8IW36 515 aa12.22□□□□□ -0.45
LMO4-201ENST00000370542 OR11L1Q8NGX0 322 aa12.22□□□□□ -0.45
LMO4-201ENST00000370542 ABHD5Q8WTS1 349 aa12.22□□□□□ -0.45
LMO4-201ENST00000370542 TOMM40LQ969M1 308 aa12.22□□□□□ -0.45
LMO4-201ENST00000370542 PINX1Q96BK5 328 aaKnown RBP12.22□□□□□ -0.45
LMO4-201ENST00000370542 R3HDM4Q96D70 268 aa12.22□□□□□ -0.45
LMO4-201ENST00000370542 RBM14Q96PK6 669 aaKnown RBP12.22□□□□□ -0.45
LMO4-201ENST00000370542 OR5B12Q96R08 314 aa12.22□□□□□ -0.45
LMO4-201ENST00000370542 CABLES2Q9BTV7 478 aa12.22□□□□□ -0.45
LMO4-201ENST00000370542 ELL3Q9HB65 397 aaPredicted RBP12.22□□□□□ -0.45
LMO4-201ENST00000370542 SDF2L1Q9HCN8 221 aa12.22□□□□□ -0.45
LMO4-201ENST00000370542 RNF7Q9UBF6 113 aa12.22□□□□□ -0.45
LMO4-201ENST00000370542 CLN8Q9UBY8 286 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms