RNA–Protein interactions for RNA: ENST00000370056.8

VAV3-202, Transcript of vav guanine nucleotide exchange factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAV3, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV3-202ENST00000370056 HSPB9Q9BQS6 159 aa18.28■□□□□ 0.52
VAV3-202ENST00000370056 C17orf98A8MV24 154 aa18.28■□□□□ 0.52
VAV3-202ENST00000370056 VENTXO95231 258 aa18.28■□□□□ 0.52
VAV3-202ENST00000370056 GTF2H5Q6ZYL4 71 aa18.28■□□□□ 0.52
VAV3-202ENST00000370056 FOXD3Q9UJU5 478 aaPredicted RBP18.28■□□□□ 0.52
VAV3-202ENST00000370056 CACNA1DQ01668 2161 aa18.27■□□□□ 0.52
VAV3-202ENST00000370056 IGHV2OR16-5A0A0B4J2B6 119 aa18.27■□□□□ 0.52
VAV3-202ENST00000370056 C9orf172C9J069 976 aa18.27■□□□□ 0.52
VAV3-202ENST00000370056 CRYBB3P26998 211 aa18.27■□□□□ 0.52
VAV3-202ENST00000370056 ZIC4Q8N9L1 334 aa18.27■□□□□ 0.52
VAV3-202ENST00000370056 MRPL32Q9BYC8 188 aaKnown RBP18.27■□□□□ 0.52
VAV3-202ENST00000370056 PPIAL4CA0A0B4J2A2 164 aa18.27■□□□□ 0.51
VAV3-202ENST00000370056 LDLRAD4O15165 306 aa18.27■□□□□ 0.51
VAV3-202ENST00000370056 SRP19P09132 144 aaKnown RBP18.27■□□□□ 0.51
VAV3-202ENST00000370056 PPIAL4GP0DN37 164 aa18.27■□□□□ 0.51
VAV3-202ENST00000370056 GCHFRP30047 84 aa18.27■□□□□ 0.51
VAV3-202ENST00000370056 NUBP1P53384 320 aa18.27■□□□□ 0.51
VAV3-202ENST00000370056 LBHQ53QV2 105 aaPredicted RBP18.27■□□□□ 0.51
VAV3-202ENST00000370056 OR51G1Q8NGK1 321 aa18.27■□□□□ 0.51
VAV3-202ENST00000370056 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.27■□□□□ 0.51
VAV3-202ENST00000370056 KLHDC3Q9BQ90 382 aa18.27■□□□□ 0.51
VAV3-202ENST00000370056 OR51M1Q9H341 326 aa18.27■□□□□ 0.51
VAV3-202ENST00000370056 TRGC1P0CF51 173 aa18.26■□□□□ 0.51
VAV3-202ENST00000370056 ATRAIDQ6UW56 229 aa18.26■□□□□ 0.51
VAV3-202ENST00000370056 WDR31Q8NA23 367 aa18.26■□□□□ 0.51
VAV3-202ENST00000370056 MRPL18Q9H0U6 180 aaKnown RBP18.26■□□□□ 0.51
VAV3-202ENST00000370056 TMPRSS3P57727 454 aa18.26■□□□□ 0.51
VAV3-202ENST00000370056 HOXA4Q00056 320 aaPredicted RBP18.26■□□□□ 0.51
VAV3-202ENST00000370056 LPAR2Q9HBW0 351 aa18.26■□□□□ 0.51
VAV3-202ENST00000370056 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP18.25■□□□□ 0.51
VAV3-202ENST00000370056 FAM106CPP0CH98 169 aa18.25■□□□□ 0.51
VAV3-202ENST00000370056 RBM14Q96PK6 669 aaKnown RBP18.25■□□□□ 0.51
VAV3-202ENST00000370056 IGKV1D-13A0A0B4J2D9 117 aa18.25■□□□□ 0.51
VAV3-202ENST00000370056 CA2P00918 260 aa18.25■□□□□ 0.51
VAV3-202ENST00000370056 IGKV1-13P0DP09 117 aa18.25■□□□□ 0.51
VAV3-202ENST00000370056 FAM166AQ6J272 317 aa18.25■□□□□ 0.51
VAV3-202ENST00000370056 FAM90A1Q86YD7 464 aa18.25■□□□□ 0.51
VAV3-202ENST00000370056 PLPPR1Q8TBJ4 325 aa18.25■□□□□ 0.51
VAV3-202ENST00000370056 DPF1Q92782 380 aa18.25■□□□□ 0.51
VAV3-202ENST00000370056 IGHV1-69-2A0A0G2JMI3 117 aa18.24■□□□□ 0.51
VAV3-202ENST00000370056 OSR1Q8TAX0 266 aaPredicted RBP18.24■□□□□ 0.51
VAV3-202ENST00000370056 MED12Q93074 2177 aa18.24■□□□□ 0.51
VAV3-202ENST00000370056 FNDC1Q4ZHG4 1894 aaPredicted RBP18.24■□□□□ 0.51
VAV3-202ENST00000370056 CELA3BP08861 270 aa18.24■□□□□ 0.51
VAV3-202ENST00000370056 PCSK4Q6UW60 755 aa18.24■□□□□ 0.51
VAV3-202ENST00000370056 CLEC7AQ9BXN2 247 aa18.24■□□□□ 0.51
VAV3-202ENST00000370056 CDC42EP3Q9UKI2 254 aa18.24■□□□□ 0.51
VAV3-202ENST00000370056 CD99P14209 185 aa18.24■□□□□ 0.51
VAV3-202ENST00000370056 IGKV1D-8A0A087WSZ0 117 aa18.24■□□□□ 0.51
VAV3-202ENST00000370056 TM4SF5O14894 197 aa18.24■□□□□ 0.51
VAV3-202ENST00000370056 FGF16O43320 207 aa18.24■□□□□ 0.51
VAV3-202ENST00000370056 CYP2G1PQ6ZSU1 146 aa18.24■□□□□ 0.51
VAV3-202ENST00000370056 ZNF525Q8N782 197 aa18.24■□□□□ 0.51
VAV3-202ENST00000370056 NPIPB3Q92617 1050 aa18.24■□□□□ 0.51
VAV3-202ENST00000370056 NABP1Q96AH0 204 aa18.24■□□□□ 0.51
VAV3-202ENST00000370056 SFRP2Q96HF1 295 aa18.24■□□□□ 0.51
VAV3-202ENST00000370056 SH2D7A6NKC9 451 aaPredicted RBP18.23■□□□□ 0.51
VAV3-202ENST00000370056 IL6RP08887 468 aaPredicted RBP18.23■□□□□ 0.51
VAV3-202ENST00000370056 Q1RN00 199 aa18.23■□□□□ 0.51
VAV3-202ENST00000370056 B9A039 149 aa18.23■□□□□ 0.51
VAV3-202ENST00000370056 ACSF3Q4G176 576 aaPredicted RBP18.23■□□□□ 0.51
VAV3-202ENST00000370056 LHFPL1Q86WI0 220 aa18.23■□□□□ 0.51
VAV3-202ENST00000370056 RALYQ9UKM9 306 aaKnown RBP18.23■□□□□ 0.51
VAV3-202ENST00000370056 TSC2P49815 1807 aa18.23■□□□□ 0.51
VAV3-202ENST00000370056 NCOR1O75376 2440 aa18.23■□□□□ 0.51
VAV3-202ENST00000370056 TMEM189A5PLL7 270 aa18.23■□□□□ 0.51
VAV3-202ENST00000370056 CD40P25942 277 aa18.23■□□□□ 0.51
VAV3-202ENST00000370056 PPOXP50336 477 aa18.23■□□□□ 0.51
VAV3-202ENST00000370056 FAM27E3Q08E93 113 aa18.23■□□□□ 0.51
VAV3-202ENST00000370056 HSPB7Q9UBY9 170 aa18.23■□□□□ 0.51
VAV3-202ENST00000370056 IGKV3D-15A0A087WSY6 115 aa18.22■□□□□ 0.51
VAV3-202ENST00000370056 SLC25A33Q9BSK2 321 aa18.22■□□□□ 0.51
VAV3-202ENST00000370056 SEMA5BQ9P283 1151 aa18.22■□□□□ 0.51
VAV3-202ENST00000370056 IGKV3-7A0A075B6H7 116 aa18.22■□□□□ 0.51
VAV3-202ENST00000370056 TRAV30A0A087WSZ9 112 aa18.22■□□□□ 0.51
VAV3-202ENST00000370056 MFAP4P55083 255 aa18.22■□□□□ 0.51
VAV3-202ENST00000370056 DNM1P46Q6ZS02 220 aa18.22■□□□□ 0.51
VAV3-202ENST00000370056 KBTBD11-OT1A0A1B0GTJ5 212 aa18.22■□□□□ 0.51
VAV3-202ENST00000370056 AMY1AP04745 511 aa18.22■□□□□ 0.51
VAV3-202ENST00000370056 FXYD3Q14802 87 aa18.22■□□□□ 0.51
VAV3-202ENST00000370056 OR8A1Q8NGG7 326 aa18.22■□□□□ 0.51
VAV3-202ENST00000370056 TCF20Q9UGU0 1960 aaKnown RBP18.21■□□□□ 0.51
VAV3-202ENST00000370056 SS18L1O75177 396 aaPredicted RBP18.21■□□□□ 0.51
VAV3-202ENST00000370056 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa18.21■□□□□ 0.51
VAV3-202ENST00000370056 LRTM2Q8N967 370 aa18.21■□□□□ 0.51
VAV3-202ENST00000370056 C9orf106Q8NAJ2 232 aa18.21■□□□□ 0.51
VAV3-202ENST00000370056 TMEM208Q9BTX3 173 aa18.21■□□□□ 0.51
VAV3-202ENST00000370056 J3KRW8 73 aa18.21■□□□□ 0.51
VAV3-202ENST00000370056 RPLP1P05386 114 aaKnown RBP18.21■□□□□ 0.51
VAV3-202ENST00000370056 EGR1P18146 543 aa18.21■□□□□ 0.51
VAV3-202ENST00000370056 CLDND2Q8NHS1 167 aa18.21■□□□□ 0.51
VAV3-202ENST00000370056 ZNF385CQ66K41 422 aaPredicted RBP18.21■□□□□ 0.51
VAV3-202ENST00000370056 FGFBP3Q8TAT2 258 aa18.21■□□□□ 0.51
VAV3-202ENST00000370056 PINLYPA6NC86 204 aa18.21■□□□□ 0.51
VAV3-202ENST00000370056 CBY3A6NI87 242 aa18.21■□□□□ 0.51
VAV3-202ENST00000370056 DCTN5Q9BTE1 182 aa18.21■□□□□ 0.51
VAV3-202ENST00000370056 LIPFP07098 398 aa18.2■□□□□ 0.5
VAV3-202ENST00000370056 TFF3Q07654 80 aa18.2■□□□□ 0.5
VAV3-202ENST00000370056 OR4A47Q6IF82 309 aa18.2■□□□□ 0.5
VAV3-202ENST00000370056 TMEM105Q8N8V8 129 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms