RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 C11orf53Q8IXP5 236 aa8.35□□□□□ -1.07
PRPF38B-203ENST00000370025 RND1Q92730 232 aa8.35□□□□□ -1.07
PRPF38B-203ENST00000370025 DLL1O00548 723 aa8.34□□□□□ -1.07
PRPF38B-203ENST00000370025 TUSC2O75896 110 aa8.34□□□□□ -1.07
PRPF38B-203ENST00000370025 HAND1O96004 215 aa8.34□□□□□ -1.07
PRPF38B-203ENST00000370025 IL6RP08887 468 aaPredicted RBP8.34□□□□□ -1.07
PRPF38B-203ENST00000370025 PNRC1Q12796 327 aaPredicted RBP8.34□□□□□ -1.07
PRPF38B-203ENST00000370025 MOB1BQ7L9L4 216 aa8.34□□□□□ -1.07
PRPF38B-203ENST00000370025 SSX8Q7RTT4 187 aa8.34□□□□□ -1.07
PRPF38B-203ENST00000370025 ZNF808Q8N4W9 903 aaPredicted RBP8.34□□□□□ -1.07
PRPF38B-203ENST00000370025 CMTM2Q8TAZ6 248 aa8.34□□□□□ -1.07
PRPF38B-203ENST00000370025 ZCCHC14Q8WYQ9 949 aaKnown RBP8.34□□□□□ -1.07
PRPF38B-203ENST00000370025 MSI2Q96DH6 328 aaKnown RBP8.34□□□□□ -1.07
PRPF38B-203ENST00000370025 SLC35E1Q96K37 410 aa8.34□□□□□ -1.07
PRPF38B-203ENST00000370025 MIEN1Q9BRT3 115 aa8.34□□□□□ -1.07
PRPF38B-203ENST00000370025 HINT2Q9BX68 163 aa8.34□□□□□ -1.07
PRPF38B-203ENST00000370025 HES4Q9HCC6 221 aa8.34□□□□□ -1.07
PRPF38B-203ENST00000370025 CCKARP32238 428 aa8.34□□□□□ -1.07
PRPF38B-203ENST00000370025 UBE2G2P60604 165 aa8.34□□□□□ -1.07
PRPF38B-203ENST00000370025 RPL23P62829 140 aaKnown RBP8.34□□□□□ -1.07
PRPF38B-203ENST00000370025 GAGE1Q13065 139 aa8.34□□□□□ -1.07
PRPF38B-203ENST00000370025 TMEM108Q6UXF1 575 aa8.34□□□□□ -1.07
PRPF38B-203ENST00000370025 WDR82Q6UXN9 313 aa8.34□□□□□ -1.07
PRPF38B-203ENST00000370025 Q6ZN92 141 aa8.34□□□□□ -1.07
PRPF38B-203ENST00000370025 TMEM170AQ8WVE7 144 aa8.34□□□□□ -1.07
PRPF38B-203ENST00000370025 GNPNAT1Q96EK6 184 aaPredicted RBP8.34□□□□□ -1.07
PRPF38B-203ENST00000370025 TRAPPC2LQ9UL33 140 aa8.34□□□□□ -1.07
PRPF38B-203ENST00000370025 MAP1LC3B2A6NCE7 125 aa8.34□□□□□ -1.07
PRPF38B-203ENST00000370025 TMEM11P17152 192 aa8.34□□□□□ -1.07
PRPF38B-203ENST00000370025 CD40P25942 277 aa8.34□□□□□ -1.07
PRPF38B-203ENST00000370025 C20orf204Q6ZNR8 217 aa8.34□□□□□ -1.07
PRPF38B-203ENST00000370025 OR4C5Q8NGB2 326 aa8.34□□□□□ -1.07
PRPF38B-203ENST00000370025 MAP1LC3BQ9GZQ8 125 aa8.34□□□□□ -1.07
PRPF38B-203ENST00000370025 WNT10AQ9GZT5 417 aa8.34□□□□□ -1.07
PRPF38B-203ENST00000370025 SLC39A9Q9NUM3 307 aa8.34□□□□□ -1.07
PRPF38B-203ENST00000370025 ZFP30Q9Y2G7 519 aa8.34□□□□□ -1.07
PRPF38B-203ENST00000370025 WNK2Q9Y3S1 2297 aa8.33□□□□□ -1.08
PRPF38B-203ENST00000370025 KIR2DL5BA0A0G2JN68 375 aa8.33□□□□□ -1.08
PRPF38B-203ENST00000370025 KIR2DL5BA0A0G2JPC4 375 aa8.33□□□□□ -1.08
PRPF38B-203ENST00000370025 C3orf85A0A1B0GTC6 90 aa8.33□□□□□ -1.08
PRPF38B-203ENST00000370025 A0A1B0GW64 132 aa8.33□□□□□ -1.08
PRPF38B-203ENST00000370025 C1QTNF9BB2RNN3 333 aa8.33□□□□□ -1.08
PRPF38B-203ENST00000370025 F2Z2F3 143 aa8.33□□□□□ -1.08
PRPF38B-203ENST00000370025 PITX3O75364 302 aa8.33□□□□□ -1.08
PRPF38B-203ENST00000370025 KLRB1Q12918 225 aa8.33□□□□□ -1.08
PRPF38B-203ENST00000370025 ZNF726P1Q15940 193 aa8.33□□□□□ -1.08
PRPF38B-203ENST00000370025 SMIM21Q3B7S5 101 aa8.33□□□□□ -1.08
PRPF38B-203ENST00000370025 ACP7Q6ZNF0 438 aa8.33□□□□□ -1.08
PRPF38B-203ENST00000370025 Q6ZWC4 215 aa8.33□□□□□ -1.08
PRPF38B-203ENST00000370025 BAGE3Q86Y29 109 aa8.33□□□□□ -1.08
PRPF38B-203ENST00000370025 BAGE2Q86Y30 109 aa8.33□□□□□ -1.08
PRPF38B-203ENST00000370025 KIR2DL5AQ8N109 375 aa8.33□□□□□ -1.08
PRPF38B-203ENST00000370025 LYG1Q8N1E2 194 aa8.33□□□□□ -1.08
PRPF38B-203ENST00000370025 TAAR3PQ9P1P4 343 aa8.33□□□□□ -1.08
PRPF38B-203ENST00000370025 ABCA4P78363 2273 aa8.33□□□□□ -1.08
PRPF38B-203ENST00000370025 WNT9BO14905 357 aa8.33□□□□□ -1.08
PRPF38B-203ENST00000370025 TMEM183BQ1AE95 376 aa8.33□□□□□ -1.08
PRPF38B-203ENST00000370025 MSMPQ1L6U9 139 aa8.33□□□□□ -1.08
PRPF38B-203ENST00000370025 SPANXN5Q5MJ07 72 aa8.33□□□□□ -1.08
PRPF38B-203ENST00000370025 ZNF497Q6ZNH5 498 aa8.33□□□□□ -1.08
PRPF38B-203ENST00000370025 VKORC1Q9BQB6 163 aa8.33□□□□□ -1.08
PRPF38B-203ENST00000370025 ALKBH7Q9BT30 221 aaPredicted RBP8.33□□□□□ -1.08
PRPF38B-203ENST00000370025 PARLQ9H300 379 aa8.33□□□□□ -1.08
PRPF38B-203ENST00000370025 NAT8Q9UHE5 227 aa8.33□□□□□ -1.08
PRPF38B-203ENST00000370025 WFDC8Q8IUA0 241 aa8.33□□□□□ -1.08
PRPF38B-203ENST00000370025 PLPPR1Q8TBJ4 325 aa8.33□□□□□ -1.08
PRPF38B-203ENST00000370025 LRRC29Q8WV35 223 aa8.33□□□□□ -1.08
PRPF38B-203ENST00000370025 ACY3Q96HD9 319 aa8.33□□□□□ -1.08
PRPF38B-203ENST00000370025 JKAMPQ9P055 326 aa8.33□□□□□ -1.08
PRPF38B-203ENST00000370025 USF3Q68DE3 2245 aa8.32□□□□□ -1.08
PRPF38B-203ENST00000370025 TRGV8A0A0C4DH27 118 aa8.32□□□□□ -1.08
PRPF38B-203ENST00000370025 CDS2O95674 445 aa8.32□□□□□ -1.08
PRPF38B-203ENST00000370025 HRASP01112 189 aa8.32□□□□□ -1.08
PRPF38B-203ENST00000370025 S100GP29377 79 aa8.32□□□□□ -1.08
PRPF38B-203ENST00000370025 THBS3P49746 956 aa8.32□□□□□ -1.08
PRPF38B-203ENST00000370025 TAS2R30P59541 319 aa8.32□□□□□ -1.08
PRPF38B-203ENST00000370025 VAMP3Q15836 100 aa8.32□□□□□ -1.08
PRPF38B-203ENST00000370025 TBC1D26Q86UD7 250 aa8.32□□□□□ -1.08
PRPF38B-203ENST00000370025 C18orf12Q96KH6 178 aa8.32□□□□□ -1.08
PRPF38B-203ENST00000370025 LYRM2Q9NU23 88 aaPredicted RBP8.32□□□□□ -1.08
PRPF38B-203ENST00000370025 OR6C3Q9NZP0 311 aa8.32□□□□□ -1.08
PRPF38B-203ENST00000370025 IGLV3-9A0A075B6K5 115 aa8.32□□□□□ -1.08
PRPF38B-203ENST00000370025 CBLN1P23435 193 aa8.32□□□□□ -1.08
PRPF38B-203ENST00000370025 IL3RAP26951 378 aa8.32□□□□□ -1.08
PRPF38B-203ENST00000370025 CLEC2AQ6UVW9 174 aa8.32□□□□□ -1.08
PRPF38B-203ENST00000370025 C22orf34Q6ZV56 151 aa8.32□□□□□ -1.08
PRPF38B-203ENST00000370025 OR4D5Q8NGN0 318 aa8.32□□□□□ -1.08
PRPF38B-203ENST00000370025 TMEM106BQ9NUM4 274 aa8.32□□□□□ -1.08
PRPF38B-203ENST00000370025 KCNIP1Q9NZI2 227 aa8.32□□□□□ -1.08
PRPF38B-203ENST00000370025 IGKV1-6A0A0C4DH72 117 aa8.32□□□□□ -1.08
PRPF38B-203ENST00000370025 UBE2L5PA0A1B0GUS4 154 aa8.32□□□□□ -1.08
PRPF38B-203ENST00000370025 TMEM30CPA0ZSE6 113 aa8.32□□□□□ -1.08
PRPF38B-203ENST00000370025 MPPED1O15442 326 aa8.32□□□□□ -1.08
PRPF38B-203ENST00000370025 PMCHP20382 165 aa8.32□□□□□ -1.08
PRPF38B-203ENST00000370025 CEBPDP49716 269 aaPredicted RBP8.32□□□□□ -1.08
PRPF38B-203ENST00000370025 ACOT6Q3I5F7 207 aaPredicted RBP8.32□□□□□ -1.08
PRPF38B-203ENST00000370025 FFAR4Q5NUL3 377 aa8.32□□□□□ -1.08
PRPF38B-203ENST00000370025 PRR7Q8TB68 274 aa8.32□□□□□ -1.08
PRPF38B-203ENST00000370025 ARFGEF3Q5TH69 2177 aa8.31□□□□□ -1.08
PRPF38B-203ENST00000370025 DCHS1Q96JQ0 3298 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms