RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 ATP7AQ04656 1500 aa1.4□□□□□ -2.18
RNU4-42P-201ENST00000364738 PHLPP1O60346 1717 aa1.4□□□□□ -2.18
RNU4-42P-201ENST00000364738 ABCA3Q99758 1704 aa1.4□□□□□ -2.18
RNU4-42P-201ENST00000364738 IFT172Q9UG01 1749 aa1.4□□□□□ -2.18
RNU4-42P-201ENST00000364738 FOCADQ5VW36 1801 aa1.4□□□□□ -2.18
RNU4-42P-201ENST00000364738 ECM29Q5VYK3 1845 aa1.4□□□□□ -2.18
RNU4-42P-201ENST00000364738 LOXHD1Q8IVV2 1947 aa1.4□□□□□ -2.18
RNU4-42P-201ENST00000364738 TIAM1Q13009 1591 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 PLIN4Q96Q06 1357 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 IGHV3OR16-12A0A075B7B8 117 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 LOC102724200A0A096LPH7 203 aaPredicted RBP1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 TRAV5A0A0B4J249 113 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 SMIM28A0A1B0GU29 152 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 GGT3PA6NGU5 568 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 BBIP1A8MTZ0 92 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 BTNL10A8MVZ5 291 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 B4DEV8 164 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 MCRIP1C9JLW8 97 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 GABRPO00591 440 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 LYRM1O43325 122 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 SLC37A4O43826 429 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 HIST1H2BKO60814 126 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 EEDO75530 441 aaKnown RBP1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 LSM8O95777 96 aaKnown RBP1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 HSPB1P04792 205 aaKnown RBP1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 IGF1P05019 195 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 HIST1H2BJP06899 126 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 GPX1P07203 203 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 PFN1P07737 140 aaKnown RBP1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 SOD3P08294 240 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 MRPL3P09001 348 aaKnown RBP1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 SPINK8P0C7L1 97 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 SLC35G6P0C7Q6 338 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 CTSEP14091 401 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 IGFBP3P17936 291 aaPredicted RBP1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 RPL7P18124 248 aaKnown RBP1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 CSRP1P21291 193 aaKnown RBP1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 HIST1H2BOP23527 126 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 CNTFRP26992 372 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 BLVRBP30043 206 aaPredicted RBP1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 HIST1H2BBP33778 126 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 RPS10P46783 165 aaKnown RBP1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 CXCL12P48061 93 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 TFPI2P48307 235 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 INPP1P49441 399 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 EMDP50402 254 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 SSR4P51571 173 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 ZNF121P58317 390 aaPredicted RBP1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 HIST1H2BDP58876 126 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 LINC00315P59091 139 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 TPPP2P59282 170 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 PFN3P60673 137 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 UBE2NP61088 152 aaKnown RBP1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 RPS14P62263 151 aaKnown RBP1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 HIST1H2BCP62807 126 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 GNG5P63218 68 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 BTG2P78543 158 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 OC90Q02509 493 aaPredicted RBP1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 RAB40BQ12829 278 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 UNC119Q13432 240 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 PAFAH1B3Q15102 231 aaKnown RBP1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 SPHARQ15513 63 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 HIST2H2BEQ16778 126 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 TP53I3Q53FA7 332 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 GLYATL3Q5SZD4 288 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 C1orf220Q5T0J3 134 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 TMEM236Q5W0B7 351 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 OR2T2Q6IF00 324 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 SFXN4Q6P4A7 337 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 CNIH2Q6PI25 160 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 Q6Q795 121 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 RASL11AQ6T310 242 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 GLIPR1L1Q6UWM5 242 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 SBSNQ6UWP8 590 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 STAC2Q6ZMT1 411 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 TEX43Q6ZNM6 134 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 Q6ZSR3 168 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 SLC25A48Q6ZT89 311 aaKnown RBP1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 GOLT1AQ6ZVE7 132 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 SLC25A26Q70HW3 274 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 OOSP2Q86WS3 158 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 ZNF695Q8IW36 515 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 VKORC1L1Q8N0U8 176 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 C1orf158Q8N1D5 194 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 TMEM86AQ8N2M4 240 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 KCNRGQ8N5I3 272 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 TTC9CQ8N5M4 171 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 TMEM86BQ8N661 226 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 TEX29Q8N6K0 151 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 COX18Q8N8Q8 333 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 WDR31Q8NA23 367 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 TMEM229BQ8NBD8 167 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 OR2M3Q8NG83 312 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 OR4K17Q8NGC6 315 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 OR51A4Q8NGJ6 313 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 OR5D16Q8NGK9 328 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 OR5AR1Q8NGP9 310 aa1.4□□□□□ -2.19
RNU4-42P-201ENST00000364738 OR5AK2Q8NH90 309 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms