RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 ANP32AP39687 249 aaKnown RBP1.57□□□□□ -2.16
RNU6-28P-201ENST00000362378 SULT1A1P50225 295 aa1.57□□□□□ -2.16
RNU6-28P-201ENST00000362378 CEBPGP53567 150 aa1.57□□□□□ -2.16
RNU6-28P-201ENST00000362378 KRTAP12-3P60328 96 aa1.57□□□□□ -2.16
RNU6-28P-201ENST00000362378 POLR2GP62487 172 aaKnown RBP eCLIP1.57□□□□□ -2.16
RNU6-28P-201ENST00000362378 PMAIP1Q13794 54 aa1.57□□□□□ -2.16
RNU6-28P-201ENST00000362378 HES1Q14469 280 aa1.57□□□□□ -2.16
RNU6-28P-201ENST00000362378 Q6ZS52 159 aa1.57□□□□□ -2.16
RNU6-28P-201ENST00000362378 OR5J2Q8NH18 312 aa1.57□□□□□ -2.16
RNU6-28P-201ENST00000362378 TXNDC17Q9BRA2 123 aa1.57□□□□□ -2.16
RNU6-28P-201ENST00000362378 XAGE1AQ9HD64 81 aa1.57□□□□□ -2.16
RNU6-28P-201ENST00000362378 VWDEQ8N2E2 1590 aa1.56□□□□□ -2.16
RNU6-28P-201ENST00000362378 A0A0G2JQZ4 141 aa1.56□□□□□ -2.16
RNU6-28P-201ENST00000362378 EEF1E1-BLOC1S5C9J1V9 151 aa1.56□□□□□ -2.16
RNU6-28P-201ENST00000362378 BPGMP07738 259 aa1.56□□□□□ -2.16
RNU6-28P-201ENST00000362378 CA5AP35218 305 aa1.56□□□□□ -2.16
RNU6-28P-201ENST00000362378 SPCS3P61009 180 aa1.56□□□□□ -2.16
RNU6-28P-201ENST00000362378 AP1S1P61966 158 aa1.56□□□□□ -2.16
RNU6-28P-201ENST00000362378 IFITM2Q01629 132 aa1.56□□□□□ -2.16
RNU6-28P-201ENST00000362378 AKR1C1Q04828 323 aa1.56□□□□□ -2.16
RNU6-28P-201ENST00000362378 TPRXLQ17RH7 258 aa1.56□□□□□ -2.16
RNU6-28P-201ENST00000362378 SSX8Q7RTT4 187 aa1.56□□□□□ -2.16
RNU6-28P-201ENST00000362378 SLC35E3Q7Z769 313 aa1.56□□□□□ -2.16
RNU6-28P-201ENST00000362378 OR51D1Q8NGF3 324 aa1.56□□□□□ -2.16
RNU6-28P-201ENST00000362378 CNBD2Q96M20 576 aa1.56□□□□□ -2.16
RNU6-28P-201ENST00000362378 RSL24D1Q9UHA3 163 aaKnown RBP1.56□□□□□ -2.16
RNU6-28P-201ENST00000362378 HHLA3Q9XRX5 114 aa1.56□□□□□ -2.16
RNU6-28P-201ENST00000362378 RBM7Q9Y580 266 aaKnown RBP1.56□□□□□ -2.16
RNU6-28P-201ENST00000362378 MYO9BQ13459 2157 aa1.55□□□□□ -2.16
RNU6-28P-201ENST00000362378 SIPA1L1O43166 1804 aa1.55□□□□□ -2.16
RNU6-28P-201ENST00000362378 TGIF2-C20orf24A0A0A6YYL0 155 aa1.55□□□□□ -2.16
RNU6-28P-201ENST00000362378 A0A0J9YW62 118 aa1.55□□□□□ -2.16
RNU6-28P-201ENST00000362378 GOLGA6L19H0YKK7 550 aa1.55□□□□□ -2.16
RNU6-28P-201ENST00000362378 H3BRN7 92 aa1.55□□□□□ -2.16
RNU6-28P-201ENST00000362378 NSA2O95478 260 aaKnown RBP1.55□□□□□ -2.16
RNU6-28P-201ENST00000362378 TNNC2P02585 160 aa1.55□□□□□ -2.16
RNU6-28P-201ENST00000362378 CCL5P13501 91 aa1.55□□□□□ -2.16
RNU6-28P-201ENST00000362378 ALDH3A1P30838 453 aa1.55□□□□□ -2.16
RNU6-28P-201ENST00000362378 CDKN2CP42773 168 aa1.55□□□□□ -2.16
RNU6-28P-201ENST00000362378 RAP1GDS1P52306 607 aa1.55□□□□□ -2.16
RNU6-28P-201ENST00000362378 RPL30P62888 115 aaKnown RBP1.55□□□□□ -2.16
RNU6-28P-201ENST00000362378 HIST2H3PS2Q5TEC6 136 aa1.55□□□□□ -2.16
RNU6-28P-201ENST00000362378 CCDC42Q96M95 316 aa1.55□□□□□ -2.16
RNU6-28P-201ENST00000362378 OR52E6Q96RD3 313 aa1.55□□□□□ -2.16
RNU6-28P-201ENST00000362378 FAM96AQ9H5X1 160 aa1.55□□□□□ -2.16
RNU6-28P-201ENST00000362378 WDR90Q96KV7 1748 aa1.54□□□□□ -2.16
RNU6-28P-201ENST00000362378 CACNA1GO43497 2377 aa1.54□□□□□ -2.16
RNU6-28P-201ENST00000362378 IGLV3-9A0A075B6K5 115 aa1.54□□□□□ -2.16
RNU6-28P-201ENST00000362378 TRAV41A0A0B4J266 112 aa1.54□□□□□ -2.16
RNU6-28P-201ENST00000362378 TMEM269A0A1B0GVZ9 245 aa1.54□□□□□ -2.16
RNU6-28P-201ENST00000362378 KPNA3O00505 521 aaPredicted RBP1.54□□□□□ -2.16
RNU6-28P-201ENST00000362378 RPP14O95059 124 aaKnown RBP1.54□□□□□ -2.16
RNU6-28P-201ENST00000362378 LYPLA2O95372 231 aa1.54□□□□□ -2.16
RNU6-28P-201ENST00000362378 RPS17P08708 135 aaKnown RBP1.54□□□□□ -2.16
RNU6-28P-201ENST00000362378 SRP19P09132 144 aaKnown RBP1.54□□□□□ -2.16
RNU6-28P-201ENST00000362378 FGF6P10767 208 aa1.54□□□□□ -2.16
RNU6-28P-201ENST00000362378 KCNE1P15382 129 aa1.54□□□□□ -2.16
RNU6-28P-201ENST00000362378 PSMB8P28062 276 aa1.54□□□□□ -2.16
RNU6-28P-201ENST00000362378 OMPP47874 163 aa1.54□□□□□ -2.16
RNU6-28P-201ENST00000362378 HINT1P49773 126 aaPredicted RBP1.54□□□□□ -2.16
RNU6-28P-201ENST00000362378 RAB13P51153 203 aa1.54□□□□□ -2.16
RNU6-28P-201ENST00000362378 LSM6P62312 80 aaKnown RBP1.54□□□□□ -2.16
RNU6-28P-201ENST00000362378 DEFB103AP81534 67 aa1.54□□□□□ -2.16
RNU6-28P-201ENST00000362378 GLT8D1Q68CQ7 371 aa1.54□□□□□ -2.16
RNU6-28P-201ENST00000362378 LYZL1Q6UWQ5 148 aa1.54□□□□□ -2.16
RNU6-28P-201ENST00000362378 Q6ZTI0 123 aa1.54□□□□□ -2.16
RNU6-28P-201ENST00000362378 TRAPPC5Q8IUR0 188 aa1.54□□□□□ -2.16
RNU6-28P-201ENST00000362378 DYNAPQ8N1N2 210 aa1.54□□□□□ -2.16
RNU6-28P-201ENST00000362378 TBC1D19Q8N5T2 526 aa1.54□□□□□ -2.16
RNU6-28P-201ENST00000362378 OR4X2Q8NGF9 303 aa1.54□□□□□ -2.16
RNU6-28P-201ENST00000362378 OR1L8Q8NGR8 309 aa1.54□□□□□ -2.16
RNU6-28P-201ENST00000362378 OR2T4Q8NH00 348 aa1.54□□□□□ -2.16
RNU6-28P-201ENST00000362378 RNASE11Q8TAA1 199 aaKnown RBP1.54□□□□□ -2.16
RNU6-28P-201ENST00000362378 ANKRD7Q92527 254 aa1.54□□□□□ -2.16
RNU6-28P-201ENST00000362378 PPP1R14BQ96C90 147 aa1.54□□□□□ -2.16
RNU6-28P-201ENST00000362378 C8orf76Q96K31 380 aa1.54□□□□□ -2.16
RNU6-28P-201ENST00000362378 VPS29Q9UBQ0 182 aa1.54□□□□□ -2.16
RNU6-28P-201ENST00000362378 ZNF532Q9HCE3 1301 aa1.54□□□□□ -2.16
RNU6-28P-201ENST00000362378 STRCP1A6NGW2 1772 aa1.54□□□□□ -2.16
RNU6-28P-201ENST00000362378 PLXNA3P51805 1871 aa1.54□□□□□ -2.16
RNU6-28P-201ENST00000362378 ARHGAP32A7KAX9 2087 aa1.54□□□□□ -2.16
RNU6-28P-201ENST00000362378 IGHV3-64A0A075B6Q5 118 aa1.53□□□□□ -2.16
RNU6-28P-201ENST00000362378 ARRDC5A6NEK1 342 aa1.53□□□□□ -2.16
RNU6-28P-201ENST00000362378 CLDN24A6NM45 220 aa1.53□□□□□ -2.16
RNU6-28P-201ENST00000362378 RTEL1-TNFRSF6BF6WH68 1400 aa1.53□□□□□ -2.16
RNU6-28P-201ENST00000362378 I3L521 148 aa1.53□□□□□ -2.16
RNU6-28P-201ENST00000362378 CHP2O43745 196 aa1.53□□□□□ -2.16
RNU6-28P-201ENST00000362378 LGALS1P09382 135 aaKnown RBP1.53□□□□□ -2.16
RNU6-28P-201ENST00000362378 CD79AP11912 226 aa1.53□□□□□ -2.16
RNU6-28P-201ENST00000362378 CCR2P41597 374 aa1.53□□□□□ -2.16
RNU6-28P-201ENST00000362378 EMP1P54849 157 aa1.53□□□□□ -2.16
RNU6-28P-201ENST00000362378 OR4D2P58180 307 aa1.53□□□□□ -2.16
RNU6-28P-201ENST00000362378 TPI1P60174 286 aa1.53□□□□□ -2.16
RNU6-28P-201ENST00000362378 ACOT6Q3I5F7 207 aaPredicted RBP1.53□□□□□ -2.16
RNU6-28P-201ENST00000362378 ZNF791Q3KP31 576 aaPredicted RBP1.53□□□□□ -2.16
RNU6-28P-201ENST00000362378 LRRC25Q8N386 305 aaPredicted RBP1.53□□□□□ -2.16
RNU6-28P-201ENST00000362378 CLDN22Q8N7P3 220 aa1.53□□□□□ -2.16
RNU6-28P-201ENST00000362378 OR51T1Q8NGJ9 327 aa1.53□□□□□ -2.16
RNU6-28P-201ENST00000362378 DCANP1Q8TF63 244 aa1.53□□□□□ -2.16
RNU6-28P-201ENST00000362378 IMMP2LQ96T52 175 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms