RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 RAB1CQ92928 201 aa7.11□□□□□ -1.27
RFX3-202ENST00000358730 MEGF10Q96KG7 1140 aa7.11□□□□□ -1.27
RFX3-202ENST00000358730 MGST2Q99735 147 aa7.11□□□□□ -1.27
RFX3-202ENST00000358730 DERL1Q9BUN8 251 aa7.11□□□□□ -1.27
RFX3-202ENST00000358730 MS4A5Q9H3V2 200 aa7.11□□□□□ -1.27
RFX3-202ENST00000358730 AURKAIP1Q9NWT8 199 aaPredicted RBP7.11□□□□□ -1.27
RFX3-202ENST00000358730 PXMP4Q9Y6I8 212 aa7.11□□□□□ -1.27
RFX3-202ENST00000358730 DSCAMO60469 2012 aa7.1□□□□□ -1.27
RFX3-202ENST00000358730 DSCAML1Q8TD84 2053 aa7.1□□□□□ -1.27
RFX3-202ENST00000358730 XKRY2A2RUG3 117 aa7.1□□□□□ -1.27
RFX3-202ENST00000358730 F2RL2O00254 374 aa7.1□□□□□ -1.27
RFX3-202ENST00000358730 SPRY3O43610 288 aa7.1□□□□□ -1.27
RFX3-202ENST00000358730 GFRA3O60609 400 aa7.1□□□□□ -1.27
RFX3-202ENST00000358730 SELLP14151 372 aa7.1□□□□□ -1.27
RFX3-202ENST00000358730 OPRK1P41145 380 aa7.1□□□□□ -1.27
RFX3-202ENST00000358730 VDAC2P45880 294 aaPredicted RBP7.1□□□□□ -1.27
RFX3-202ENST00000358730 RELBQ01201 579 aa7.1□□□□□ -1.27
RFX3-202ENST00000358730 MIC13Q5XKP0 118 aa7.1□□□□□ -1.27
RFX3-202ENST00000358730 KCNIP4Q6PIL6 250 aa7.1□□□□□ -1.27
RFX3-202ENST00000358730 LINC01551Q86U37 167 aa7.1□□□□□ -1.27
RFX3-202ENST00000358730 ABHD12Q8N2K0 398 aa7.1□□□□□ -1.27
RFX3-202ENST00000358730 OR52E5Q8NH55 327 aa7.1□□□□□ -1.27
RFX3-202ENST00000358730 OR4S2Q8NH73 311 aa7.1□□□□□ -1.27
RFX3-202ENST00000358730 GGTLC1Q9BX51 225 aa7.1□□□□□ -1.27
RFX3-202ENST00000358730 KCNIP2Q9NS61 270 aa7.1□□□□□ -1.27
RFX3-202ENST00000358730 FUT9Q9Y231 359 aa7.1□□□□□ -1.27
RFX3-202ENST00000358730 TCF19Q9Y242 345 aa7.1□□□□□ -1.27
RFX3-202ENST00000358730 TANC2Q9HCD6 1990 aa7.1□□□□□ -1.27
RFX3-202ENST00000358730 GALR2O43603 387 aaPredicted RBP7.1□□□□□ -1.27
RFX3-202ENST00000358730 SOX15O60248 233 aa7.1□□□□□ -1.27
RFX3-202ENST00000358730 NDUFB4O95168 129 aa7.1□□□□□ -1.27
RFX3-202ENST00000358730 SRP14P37108 136 aaKnown RBP7.1□□□□□ -1.27
RFX3-202ENST00000358730 KLF3P57682 345 aaPredicted RBP7.1□□□□□ -1.27
RFX3-202ENST00000358730 FAM201AQ5SY85 155 aa7.1□□□□□ -1.27
RFX3-202ENST00000358730 UTF1Q5T230 341 aa7.1□□□□□ -1.27
RFX3-202ENST00000358730 SEM1Q6ZVN7 128 aa7.1□□□□□ -1.27
RFX3-202ENST00000358730 LURAP1LQ8IV03 231 aa7.1□□□□□ -1.27
RFX3-202ENST00000358730 FAM216AQ8WUB2 273 aa7.1□□□□□ -1.27
RFX3-202ENST00000358730 SSMEM1Q8WWF3 244 aa7.1□□□□□ -1.27
RFX3-202ENST00000358730 PLCE1Q9P212 2302 aa7.1□□□□□ -1.27
RFX3-202ENST00000358730 RP1L1Q8IWN7 2480 aaPredicted RBP7.09□□□□□ -1.27
RFX3-202ENST00000358730 OTOGLQ3ZCN5 2332 aa7.09□□□□□ -1.27
RFX3-202ENST00000358730 PRSS46E5RG02 174 aa7.09□□□□□ -1.27
RFX3-202ENST00000358730 GGCTO75223 188 aaKnown RBP7.09□□□□□ -1.27
RFX3-202ENST00000358730 AMBPP02760 352 aa7.09□□□□□ -1.27
RFX3-202ENST00000358730 KIR2DS2P43631 304 aa7.09□□□□□ -1.27
RFX3-202ENST00000358730 DEFA6Q01524 100 aa7.09□□□□□ -1.27
RFX3-202ENST00000358730 CR1LQ2VPA4 569 aa7.09□□□□□ -1.27
RFX3-202ENST00000358730 FAM78BQ5VT40 261 aa7.09□□□□□ -1.27
RFX3-202ENST00000358730 PIP4P1Q86T03 277 aa7.09□□□□□ -1.27
RFX3-202ENST00000358730 FAM169BQ8N8A8 192 aa7.09□□□□□ -1.27
RFX3-202ENST00000358730 TMEM170AQ8WVE7 144 aa7.09□□□□□ -1.27
RFX3-202ENST00000358730 ITLN1Q8WWA0 313 aa7.09□□□□□ -1.27
RFX3-202ENST00000358730 SAA2-SAA4A0A096LPE2 208 aa7.09□□□□□ -1.27
RFX3-202ENST00000358730 MBD3L4A6NDZ8 208 aaPredicted RBP7.09□□□□□ -1.27
RFX3-202ENST00000358730 MBD3L3A6NE82 208 aaPredicted RBP7.09□□□□□ -1.27
RFX3-202ENST00000358730 PGPEP1LA6NFU8 196 aa7.09□□□□□ -1.27
RFX3-202ENST00000358730 MBD3L5A6NJ08 208 aaPredicted RBP7.09□□□□□ -1.27
RFX3-202ENST00000358730 C15orf61A6NNL5 157 aa7.09□□□□□ -1.27
RFX3-202ENST00000358730 F6UZH7 168 aa7.09□□□□□ -1.27
RFX3-202ENST00000358730 SAA2P0DJI9 122 aaPredicted RBP7.09□□□□□ -1.27
RFX3-202ENST00000358730 CFHR2P36980 270 aa7.09□□□□□ -1.27
RFX3-202ENST00000358730 RAB7AP51149 207 aa7.09□□□□□ -1.27
RFX3-202ENST00000358730 TMEM249Q2WGJ8 235 aa7.09□□□□□ -1.27
RFX3-202ENST00000358730 ACTL10Q5JWF8 245 aa7.09□□□□□ -1.27
RFX3-202ENST00000358730 MBD3L2Q8NHZ7 208 aaPredicted RBP7.09□□□□□ -1.27
RFX3-202ENST00000358730 TMEM37Q8WXS4 190 aa7.09□□□□□ -1.27
RFX3-202ENST00000358730 TMEM204Q9BSN7 226 aa7.09□□□□□ -1.27
RFX3-202ENST00000358730 ZMAT5Q9UDW3 170 aaKnown RBP7.09□□□□□ -1.27
RFX3-202ENST00000358730 RAI1Q7Z5J4 1906 aaPredicted RBP7.09□□□□□ -1.28
RFX3-202ENST00000358730 TTC28Q96AY4 2481 aa7.08□□□□□ -1.28
RFX3-202ENST00000358730 TRGV8A0A0C4DH27 118 aa7.08□□□□□ -1.28
RFX3-202ENST00000358730 TMPRSS2O15393 492 aa7.08□□□□□ -1.28
RFX3-202ENST00000358730 GATCO43716 136 aaKnown RBP7.08□□□□□ -1.28
RFX3-202ENST00000358730 C1QTNF9P0C862 333 aa7.08□□□□□ -1.28
RFX3-202ENST00000358730 DNLZQ5SXM8 178 aa7.08□□□□□ -1.28
RFX3-202ENST00000358730 C1orf229Q6ZS94 237 aaPredicted RBP7.08□□□□□ -1.28
RFX3-202ENST00000358730 ZNF114Q8NC26 417 aa7.08□□□□□ -1.28
RFX3-202ENST00000358730 DDB2Q92466 427 aa7.08□□□□□ -1.28
RFX3-202ENST00000358730 ACY3Q96HD9 319 aa7.08□□□□□ -1.28
RFX3-202ENST00000358730 RHOVQ96L33 236 aa7.08□□□□□ -1.28
RFX3-202ENST00000358730 CXorf1O96002 111 aa7.08□□□□□ -1.28
RFX3-202ENST00000358730 TYMSP04818 313 aa7.08□□□□□ -1.28
RFX3-202ENST00000358730 STAG3L2P0CL84 134 aa7.08□□□□□ -1.28
RFX3-202ENST00000358730 STAG3L3P0CL85 134 aa7.08□□□□□ -1.28
RFX3-202ENST00000358730 NPY1RP25929 384 aa7.08□□□□□ -1.28
RFX3-202ENST00000358730 IL3RAP26951 378 aa7.08□□□□□ -1.28
RFX3-202ENST00000358730 TMPRSS3P57727 454 aa7.08□□□□□ -1.28
RFX3-202ENST00000358730 C17orf58Q2M2W7 97 aa7.08□□□□□ -1.28
RFX3-202ENST00000358730 CT45A1Q5HYN5 189 aa7.08□□□□□ -1.28
RFX3-202ENST00000358730 TIMM23BQ5SRD1 257 aa7.08□□□□□ -1.28
RFX3-202ENST00000358730 OR4A47Q6IF82 309 aa7.08□□□□□ -1.28
RFX3-202ENST00000358730 DUX4L9Q6RFH8 374 aaPredicted RBP7.08□□□□□ -1.28
RFX3-202ENST00000358730 LYG1Q8N1E2 194 aa7.08□□□□□ -1.28
RFX3-202ENST00000358730 CISD2Q8N5K1 135 aaKnown RBP7.08□□□□□ -1.28
RFX3-202ENST00000358730 SLC24A4Q8NFF2 622 aa7.08□□□□□ -1.28
RFX3-202ENST00000358730 CT45A3Q8NHU0 189 aa7.08□□□□□ -1.28
RFX3-202ENST00000358730 SCO2A0A1W2PP80 73 aa7.08□□□□□ -1.28
RFX3-202ENST00000358730 TSTD3H0UI37 97 aa7.08□□□□□ -1.28
RFX3-202ENST00000358730 CD99P14209 185 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms