RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 PMS2P5A8MQ11 134 aa7.13□□□□□ -1.27
TRIM55-204ENST00000353317 WNT9BO14905 357 aa7.13□□□□□ -1.27
TRIM55-204ENST00000353317 TIMM8AO60220 97 aaPredicted RBP7.13□□□□□ -1.27
TRIM55-204ENST00000353317 IFNA10P01566 189 aa7.13□□□□□ -1.27
TRIM55-204ENST00000353317 RPS16P62249 146 aaKnown RBP7.13□□□□□ -1.27
TRIM55-204ENST00000353317 RPL30P62888 115 aaKnown RBP7.13□□□□□ -1.27
TRIM55-204ENST00000353317 ZNF718Q3SXZ3 478 aa7.13□□□□□ -1.27
TRIM55-204ENST00000353317 DMRTC2Q8IXT2 367 aaPredicted RBP7.13□□□□□ -1.27
TRIM55-204ENST00000353317 ZCCHC24Q8N2G6 241 aaKnown RBP7.13□□□□□ -1.27
TRIM55-204ENST00000353317 C5orf30Q96GV9 206 aa7.13□□□□□ -1.27
TRIM55-204ENST00000353317 BBC3Q96PG8 261 aaPredicted RBP7.13□□□□□ -1.27
TRIM55-204ENST00000353317 MYO18BQ8IUG5 2567 aa7.13□□□□□ -1.27
TRIM55-204ENST00000353317 TACC2O95359 2948 aa7.13□□□□□ -1.27
TRIM55-204ENST00000353317 A0A1B0GWJ7 208 aa7.13□□□□□ -1.27
TRIM55-204ENST00000353317 ODAMA1E959 279 aa7.13□□□□□ -1.27
TRIM55-204ENST00000353317 A8MWP6 167 aa7.13□□□□□ -1.27
TRIM55-204ENST00000353317 PLAUP00749 431 aa7.13□□□□□ -1.27
TRIM55-204ENST00000353317 HRASP01112 189 aa7.13□□□□□ -1.27
TRIM55-204ENST00000353317 FGF7P21781 194 aa7.13□□□□□ -1.27
TRIM55-204ENST00000353317 GLRXP35754 106 aa7.13□□□□□ -1.27
TRIM55-204ENST00000353317 BRWD1-AS2P59051 145 aa7.13□□□□□ -1.27
TRIM55-204ENST00000353317 SSTP61278 116 aa7.13□□□□□ -1.27
TRIM55-204ENST00000353317 ERVK11-1P61568 191 aa7.13□□□□□ -1.27
TRIM55-204ENST00000353317 TFF3Q07654 80 aa7.13□□□□□ -1.27
TRIM55-204ENST00000353317 ZNF816Q0VGE8 651 aaPredicted RBP7.13□□□□□ -1.27
TRIM55-204ENST00000353317 OR1L1Q8NH94 360 aa7.13□□□□□ -1.27
TRIM55-204ENST00000353317 RAB24Q969Q5 203 aa7.13□□□□□ -1.27
TRIM55-204ENST00000353317 ZDHHC16Q969W1 377 aa7.13□□□□□ -1.27
TRIM55-204ENST00000353317 MISP3Q96FF7 219 aa7.13□□□□□ -1.27
TRIM55-204ENST00000353317 OR5B12Q96R08 314 aa7.13□□□□□ -1.27
TRIM55-204ENST00000353317 ACTR3CQ9C0K3 210 aaPredicted RBP7.13□□□□□ -1.27
TRIM55-204ENST00000353317 WIPI2Q9Y4P8 454 aa7.13□□□□□ -1.27
TRIM55-204ENST00000353317 IGLV3-9A0A075B6K5 115 aa7.12□□□□□ -1.27
TRIM55-204ENST00000353317 LRRC30A6NM36 301 aa7.12□□□□□ -1.27
TRIM55-204ENST00000353317 PSPNO60542 156 aa7.12□□□□□ -1.27
TRIM55-204ENST00000353317 ZG16O60844 167 aa7.12□□□□□ -1.27
TRIM55-204ENST00000353317 PRB1P04280 392 aa7.12□□□□□ -1.27
TRIM55-204ENST00000353317 P0C879 139 aa7.12□□□□□ -1.27
TRIM55-204ENST00000353317 NDUFB7P17568 137 aa7.12□□□□□ -1.27
TRIM55-204ENST00000353317 GNLYP22749 145 aa7.12□□□□□ -1.27
TRIM55-204ENST00000353317 CEBPDP49716 269 aaPredicted RBP7.12□□□□□ -1.27
TRIM55-204ENST00000353317 PDLIM4P50479 330 aa7.12□□□□□ -1.27
TRIM55-204ENST00000353317 FAM3BP58499 235 aaPredicted RBP7.12□□□□□ -1.27
TRIM55-204ENST00000353317 C3orf36Q3SXR2 165 aa7.12□□□□□ -1.27
TRIM55-204ENST00000353317 FFAR4Q5NUL3 377 aa7.12□□□□□ -1.27
TRIM55-204ENST00000353317 PRR7Q8TB68 274 aa7.12□□□□□ -1.27
TRIM55-204ENST00000353317 TMEM170AQ8WVE7 144 aa7.12□□□□□ -1.27
TRIM55-204ENST00000353317 TMEM37Q8WXS4 190 aa7.12□□□□□ -1.27
TRIM55-204ENST00000353317 OR2D2Q9H210 308 aa7.12□□□□□ -1.27
TRIM55-204ENST00000353317 FUT9Q9Y231 359 aa7.12□□□□□ -1.27
TRIM55-204ENST00000353317 SLC31A2O15432 143 aa7.12□□□□□ -1.27
TRIM55-204ENST00000353317 PAGE4O60829 102 aa7.12□□□□□ -1.27
TRIM55-204ENST00000353317 IGHV3-13P01766 116 aa7.12□□□□□ -1.27
TRIM55-204ENST00000353317 NPPCP23582 126 aa7.12□□□□□ -1.27
TRIM55-204ENST00000353317 GCH1P30793 250 aa7.12□□□□□ -1.27
TRIM55-204ENST00000353317 GNB2P62879 340 aa7.12□□□□□ -1.27
TRIM55-204ENST00000353317 ZNF146Q15072 292 aa7.12□□□□□ -1.27
TRIM55-204ENST00000353317 ACTL10Q5JWF8 245 aa7.12□□□□□ -1.27
TRIM55-204ENST00000353317 ZNF808Q8N4W9 903 aaPredicted RBP7.12□□□□□ -1.27
TRIM55-204ENST00000353317 ZNF645Q8N7E2 425 aa7.12□□□□□ -1.27
TRIM55-204ENST00000353317 TMEM147Q9BVK8 224 aa7.12□□□□□ -1.27
TRIM55-204ENST00000353317 RTL8AQ9BWD3 113 aa7.12□□□□□ -1.27
TRIM55-204ENST00000353317 NPCDR1Q9BY65 106 aa7.12□□□□□ -1.27
TRIM55-204ENST00000353317 RNF212BA8MTL3 300 aa7.11□□□□□ -1.27
TRIM55-204ENST00000353317 ZNF705GA8MUZ8 300 aaPredicted RBP7.11□□□□□ -1.27
TRIM55-204ENST00000353317 S1PR2O95136 353 aa7.11□□□□□ -1.27
TRIM55-204ENST00000353317 NXPH2O95156 264 aa7.11□□□□□ -1.27
TRIM55-204ENST00000353317 MBP02144 154 aa7.11□□□□□ -1.27
TRIM55-204ENST00000353317 GYPAP02724 150 aa7.11□□□□□ -1.27
TRIM55-204ENST00000353317 SNRPCP09234 159 aaKnown RBP7.11□□□□□ -1.27
TRIM55-204ENST00000353317 CHRNB4P30926 498 aa7.11□□□□□ -1.27
TRIM55-204ENST00000353317 LINC00205P59089 165 aa7.11□□□□□ -1.27
TRIM55-204ENST00000353317 TAS2R60P59551 318 aa7.11□□□□□ -1.27
TRIM55-204ENST00000353317 EIF4EBP1Q13541 118 aaPredicted RBP7.11□□□□□ -1.27
TRIM55-204ENST00000353317 Q8IYB0 196 aa7.11□□□□□ -1.27
TRIM55-204ENST00000353317 OR5T1Q8NG75 326 aa7.11□□□□□ -1.27
TRIM55-204ENST00000353317 OR2Z1Q8NG97 314 aa7.11□□□□□ -1.27
TRIM55-204ENST00000353317 OR10P1Q8NGE3 313 aa7.11□□□□□ -1.27
TRIM55-204ENST00000353317 DTD1Q8TEA8 209 aa7.11□□□□□ -1.27
TRIM55-204ENST00000353317 ANAPC16Q96DE5 110 aa7.11□□□□□ -1.27
TRIM55-204ENST00000353317 ACY3Q96HD9 319 aa7.11□□□□□ -1.27
TRIM55-204ENST00000353317 MANBALQ9NQG1 85 aa7.11□□□□□ -1.27
TRIM55-204ENST00000353317 RAI1Q7Z5J4 1906 aaPredicted RBP7.11□□□□□ -1.27
TRIM55-204ENST00000353317 C17orf98A8MV24 154 aa7.11□□□□□ -1.27
TRIM55-204ENST00000353317 SHISA9B4DS77 424 aa7.11□□□□□ -1.27
TRIM55-204ENST00000353317 GGCTO75223 188 aaKnown RBP7.11□□□□□ -1.27
TRIM55-204ENST00000353317 SFTPCP11686 197 aa7.11□□□□□ -1.27
TRIM55-204ENST00000353317 OR3A1P47881 315 aa7.11□□□□□ -1.27
TRIM55-204ENST00000353317 CASP6P55212 293 aa7.11□□□□□ -1.27
TRIM55-204ENST00000353317 ADIPOQQ15848 244 aa7.11□□□□□ -1.27
TRIM55-204ENST00000353317 ATP6V1FQ16864 119 aa7.11□□□□□ -1.27
TRIM55-204ENST00000353317 SPINK9Q5DT21 86 aa7.11□□□□□ -1.27
TRIM55-204ENST00000353317 BTNL3Q6UXE8 466 aa7.11□□□□□ -1.27
TRIM55-204ENST00000353317 WDR82Q6UXN9 313 aa7.11□□□□□ -1.27
TRIM55-204ENST00000353317 OR52L2PQ8NGH6 319 aa7.11□□□□□ -1.27
TRIM55-204ENST00000353317 OR2T10Q8NGZ9 312 aa7.11□□□□□ -1.27
TRIM55-204ENST00000353317 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.11□□□□□ -1.27
TRIM55-204ENST00000353317 AURKAIP1Q9NWT8 199 aaPredicted RBP7.11□□□□□ -1.27
TRIM55-204ENST00000353317 DCAF16Q9NXF7 216 aa7.11□□□□□ -1.27
TRIM55-204ENST00000353317 OR6C3Q9NZP0 311 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms