RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 AIFM2Q9BRQ8 373 aa12.77□□□□□ -0.37
RAB5C-201ENST00000346213 HSD17B6O14756 317 aa12.76□□□□□ -0.37
RAB5C-201ENST00000346213 HSPA12AO43301 675 aa12.76□□□□□ -0.37
RAB5C-201ENST00000346213 LYL1P12980 280 aa12.76□□□□□ -0.37
RAB5C-201ENST00000346213 GZMHP20718 246 aa12.76□□□□□ -0.37
RAB5C-201ENST00000346213 PRRX1P54821 245 aa12.76□□□□□ -0.37
RAB5C-201ENST00000346213 ZNF345Q14585 488 aa12.76□□□□□ -0.37
RAB5C-201ENST00000346213 ODF3L1Q8IXM7 274 aa12.76□□□□□ -0.37
RAB5C-201ENST00000346213 ZNF680Q8NEM1 530 aa12.76□□□□□ -0.37
RAB5C-201ENST00000346213 RPEQ96AT9 228 aa12.76□□□□□ -0.37
RAB5C-201ENST00000346213 GALMQ96C23 342 aa12.76□□□□□ -0.37
RAB5C-201ENST00000346213 AKR1E2Q96JD6 320 aa12.76□□□□□ -0.37
RAB5C-201ENST00000346213 TP53RKQ96S44 253 aa12.76□□□□□ -0.37
RAB5C-201ENST00000346213 WIPF1O43516 503 aa12.75□□□□□ -0.37
RAB5C-201ENST00000346213 OR2F2O95006 317 aa12.75□□□□□ -0.37
RAB5C-201ENST00000346213 S100GP29377 79 aa12.75□□□□□ -0.37
RAB5C-201ENST00000346213 PPP1CCP36873 323 aaKnown RBP12.75□□□□□ -0.37
RAB5C-201ENST00000346213 TAGLNQ01995 201 aaKnown RBP12.75□□□□□ -0.37
RAB5C-201ENST00000346213 OR2F1Q13607 317 aa12.75□□□□□ -0.37
RAB5C-201ENST00000346213 SLC25A48Q6ZT89 311 aaKnown RBP12.75□□□□□ -0.37
RAB5C-201ENST00000346213 ACOT7LQ6ZUV0 252 aa12.75□□□□□ -0.37
RAB5C-201ENST00000346213 LINC00311Q8N616 119 aa12.75□□□□□ -0.37
RAB5C-201ENST00000346213 OR52M1Q8NGK5 317 aa12.75□□□□□ -0.37
RAB5C-201ENST00000346213 TMEM56Q96MV1 263 aa12.75□□□□□ -0.37
RAB5C-201ENST00000346213 RNF126Q9BV68 326 aa12.75□□□□□ -0.37
RAB5C-201ENST00000346213 ARL6Q9H0F7 186 aa12.75□□□□□ -0.37
RAB5C-201ENST00000346213 TMEM222Q9H0R3 208 aa12.75□□□□□ -0.37
RAB5C-201ENST00000346213 MBD2Q9UBB5 411 aa12.75□□□□□ -0.37
RAB5C-201ENST00000346213 PITPNC1Q9UKF7 332 aa12.75□□□□□ -0.37
RAB5C-201ENST00000346213 TMEM56-RWDD3S4R434 201 aa12.75□□□□□ -0.37
RAB5C-201ENST00000346213 DNAH3Q8TD57 4116 aa12.75□□□□□ -0.37
RAB5C-201ENST00000346213 IGHV1-3A0A0C4DH29 117 aa12.74□□□□□ -0.37
RAB5C-201ENST00000346213 PGLYRP1O75594 196 aaPredicted RBP12.74□□□□□ -0.37
RAB5C-201ENST00000346213 B3GALNT1O75752 331 aa12.74□□□□□ -0.37
RAB5C-201ENST00000346213 CEACAM6P40199 344 aa12.74□□□□□ -0.37
RAB5C-201ENST00000346213 ZNF816Q0VGE8 651 aaPredicted RBP12.74□□□□□ -0.37
RAB5C-201ENST00000346213 HNF4GQ14541 408 aa12.74□□□□□ -0.37
RAB5C-201ENST00000346213 IAH1Q2TAA2 248 aaPredicted RBP12.74□□□□□ -0.37
RAB5C-201ENST00000346213 PRSS54Q6PEW0 395 aa12.74□□□□□ -0.37
RAB5C-201ENST00000346213 KCNRGQ8N5I3 272 aa12.74□□□□□ -0.37
RAB5C-201ENST00000346213 Q8N6K4 173 aa12.74□□□□□ -0.37
RAB5C-201ENST00000346213 LHFPL5Q8TAF8 219 aa12.74□□□□□ -0.37
RAB5C-201ENST00000346213 FAM110DQ8TAY7 271 aaPredicted RBP12.74□□□□□ -0.37
RAB5C-201ENST00000346213 TMED3Q9Y3Q3 217 aa12.74□□□□□ -0.37
RAB5C-201ENST00000346213 RNF222A6NCQ9 220 aa12.73□□□□□ -0.37
RAB5C-201ENST00000346213 LINC01548A6NM66 108 aa12.73□□□□□ -0.37
RAB5C-201ENST00000346213 H0YIZ8 118 aa12.73□□□□□ -0.37
RAB5C-201ENST00000346213 IFNA7P01567 189 aa12.73□□□□□ -0.37
RAB5C-201ENST00000346213 IGKV1D-33P01593 117 aa12.73□□□□□ -0.37
RAB5C-201ENST00000346213 IGKV1-33P01594 117 aa12.73□□□□□ -0.37
RAB5C-201ENST00000346213 PET100P0DJ07 73 aa12.73□□□□□ -0.37
RAB5C-201ENST00000346213 UCP1P25874 307 aa12.73□□□□□ -0.37
RAB5C-201ENST00000346213 LYZL2Q7Z4W2 148 aa12.73□□□□□ -0.37
RAB5C-201ENST00000346213 OR10X1Q8NGY0 326 aa12.73□□□□□ -0.37
RAB5C-201ENST00000346213 CITED2Q99967 270 aaPredicted RBP12.73□□□□□ -0.37
RAB5C-201ENST00000346213 PRSS22Q9GZN4 317 aa12.73□□□□□ -0.37
RAB5C-201ENST00000346213 DUXBA0A1W2PPF3 345 aa12.73□□□□□ -0.37
RAB5C-201ENST00000346213 OOSP1A8MZH6 123 aa12.73□□□□□ -0.37
RAB5C-201ENST00000346213 H0Y980 276 aa12.73□□□□□ -0.37
RAB5C-201ENST00000346213 CDS2O95674 445 aa12.73□□□□□ -0.37
RAB5C-201ENST00000346213 CTRB1P17538 263 aa12.73□□□□□ -0.37
RAB5C-201ENST00000346213 F2RP25116 425 aa12.73□□□□□ -0.37
RAB5C-201ENST00000346213 CEACAM3P40198 252 aa12.73□□□□□ -0.37
RAB5C-201ENST00000346213 HTD2P86397 168 aa12.73□□□□□ -0.37
RAB5C-201ENST00000346213 RAB32Q13637 225 aa12.73□□□□□ -0.37
RAB5C-201ENST00000346213 MORN2Q502X0 79 aa12.73□□□□□ -0.37
RAB5C-201ENST00000346213 CTRB2Q6GPI1 263 aa12.73□□□□□ -0.37
RAB5C-201ENST00000346213 SELENOHQ8IZQ5 122 aaKnown RBP12.73□□□□□ -0.37
RAB5C-201ENST00000346213 C5orf56Q8N8D9 126 aa12.73□□□□□ -0.37
RAB5C-201ENST00000346213 C8orf31Q8N9H6 132 aa12.73□□□□□ -0.37
RAB5C-201ENST00000346213 GSKIPQ9P0R6 139 aa12.73□□□□□ -0.37
RAB5C-201ENST00000346213 AMMECR1Q9Y4X0 333 aaPredicted RBP12.73□□□□□ -0.37
RAB5C-201ENST00000346213 M0QZ24 198 aa12.72□□□□□ -0.37
RAB5C-201ENST00000346213 IGLV2-14P01704 120 aa12.72□□□□□ -0.37
RAB5C-201ENST00000346213 BRS3P32247 399 aa12.72□□□□□ -0.37
RAB5C-201ENST00000346213 ZNF137PP52743 207 aa12.72□□□□□ -0.37
RAB5C-201ENST00000346213 EBI3Q14213 229 aa12.72□□□□□ -0.37
RAB5C-201ENST00000346213 TMEM268Q5VZI3 342 aa12.72□□□□□ -0.37
RAB5C-201ENST00000346213 INO80EQ8NBZ0 244 aaPredicted RBP12.72□□□□□ -0.37
RAB5C-201ENST00000346213 ZBTB34Q8NCN2 500 aa12.72□□□□□ -0.37
RAB5C-201ENST00000346213 IL22RA2Q969J5 263 aa12.72□□□□□ -0.37
RAB5C-201ENST00000346213 RITA1Q96K30 269 aa12.72□□□□□ -0.37
RAB5C-201ENST00000346213 RBM7Q9Y580 266 aaKnown RBP12.72□□□□□ -0.37
RAB5C-201ENST00000346213 PIGBOS1A0A0B4J2F0 54 aa12.71□□□□□ -0.37
RAB5C-201ENST00000346213 SPINT2O43291 252 aa12.71□□□□□ -0.37
RAB5C-201ENST00000346213 CFDP00746 253 aaPredicted RBP12.71□□□□□ -0.37
RAB5C-201ENST00000346213 OR8U9P0C7N5 309 aa12.71□□□□□ -0.37
RAB5C-201ENST00000346213 HTR2BP41595 481 aa12.71□□□□□ -0.37
RAB5C-201ENST00000346213 VDAC2P45880 294 aaPredicted RBP12.71□□□□□ -0.37
RAB5C-201ENST00000346213 EXOSC2Q13868 293 aaKnown RBP12.71□□□□□ -0.37
RAB5C-201ENST00000346213 MSMO1Q15800 293 aa12.71□□□□□ -0.37
RAB5C-201ENST00000346213 THNSL2Q86YJ6 484 aa12.71□□□□□ -0.37
RAB5C-201ENST00000346213 C1QL4Q86Z23 238 aa12.71□□□□□ -0.37
RAB5C-201ENST00000346213 ZNF695Q8IW36 515 aa12.71□□□□□ -0.37
RAB5C-201ENST00000346213 SLC35G3Q8N808 338 aa12.71□□□□□ -0.37
RAB5C-201ENST00000346213 OR8U1Q8NH10 309 aa12.71□□□□□ -0.37
RAB5C-201ENST00000346213 DCUN1D4Q92564 292 aa12.71□□□□□ -0.37
RAB5C-201ENST00000346213 EAF1Q96JC9 268 aaPredicted RBP12.71□□□□□ -0.37
RAB5C-201ENST00000346213 NOL4LQ96MY1 436 aaPredicted RBP12.71□□□□□ -0.37
RAB5C-201ENST00000346213 GNG12Q9UBI6 72 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms