RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 RNASEH2CQ8TDP1 164 aaKnown RBP13.21□□□□□ -0.3
SRPK1-201ENST00000346162 RTN4RQ9BZR6 473 aa13.21□□□□□ -0.3
SRPK1-201ENST00000346162 COX11Q9Y6N1 276 aa13.21□□□□□ -0.3
SRPK1-201ENST00000346162 A1L4Q6 167 aa13.2□□□□□ -0.3
SRPK1-201ENST00000346162 M0QZ24 198 aa13.2□□□□□ -0.3
SRPK1-201ENST00000346162 SMIM13P0DJ93 91 aa13.2□□□□□ -0.3
SRPK1-201ENST00000346162 CKS1BP61024 79 aa13.2□□□□□ -0.3
SRPK1-201ENST00000346162 KCNS1Q96KK3 526 aa13.2□□□□□ -0.3
SRPK1-201ENST00000346162 WFDC1Q9HC57 220 aa13.2□□□□□ -0.3
SRPK1-201ENST00000346162 FREM3P0C091 2139 aa13.2□□□□□ -0.3
SRPK1-201ENST00000346162 ARF6P62330 175 aa13.2□□□□□ -0.3
SRPK1-201ENST00000346162 SLC35E4Q6ICL7 350 aa13.2□□□□□ -0.3
SRPK1-201ENST00000346162 PNKDQ8N490 385 aa13.2□□□□□ -0.3
SRPK1-201ENST00000346162 ACACAQ13085 2346 aa13.2□□□□□ -0.3
SRPK1-201ENST00000346162 A0A1B0GWB2 263 aa13.2□□□□□ -0.3
SRPK1-201ENST00000346162 PPIAL4AQ9Y536 164 aa13.2□□□□□ -0.3
SRPK1-201ENST00000346162 MGAMO43451 1857 aa13.2□□□□□ -0.3
SRPK1-201ENST00000346162 SELENOTP62341 195 aa13.2□□□□□ -0.3
SRPK1-201ENST00000346162 SLC23A3Q6PIS1 610 aa13.2□□□□□ -0.3
SRPK1-201ENST00000346162 IL36BQ9NZH7 164 aa13.2□□□□□ -0.3
SRPK1-201ENST00000346162 ROS1P08922 2347 aa13.19□□□□□ -0.3
SRPK1-201ENST00000346162 TMPRSS2O15393 492 aa13.19□□□□□ -0.3
SRPK1-201ENST00000346162 SYNGR1O43759 233 aa13.19□□□□□ -0.3
SRPK1-201ENST00000346162 FNDC7Q5VTL7 733 aa13.19□□□□□ -0.3
SRPK1-201ENST00000346162 NFAM1Q8NET5 270 aaPredicted RBP13.19□□□□□ -0.3
SRPK1-201ENST00000346162 PRR32B1ATL7 298 aa13.19□□□□□ -0.3
SRPK1-201ENST00000346162 UCP2P55851 309 aa13.19□□□□□ -0.3
SRPK1-201ENST00000346162 UNQ6494/PRO21346Q6UXR6 183 aa13.19□□□□□ -0.3
SRPK1-201ENST00000346162 FAM90A10PA6NDY2 464 aa13.19□□□□□ -0.3
SRPK1-201ENST00000346162 FAM90A18PA6NE21 464 aa13.19□□□□□ -0.3
SRPK1-201ENST00000346162 FAM90A16PA6NEW6 464 aa13.19□□□□□ -0.3
SRPK1-201ENST00000346162 FAM90A20PA6NIJ5 464 aa13.19□□□□□ -0.3
SRPK1-201ENST00000346162 FAM90A8PA6NJQ4 464 aa13.19□□□□□ -0.3
SRPK1-201ENST00000346162 FAM90A7PA6NKC0 464 aa13.19□□□□□ -0.3
SRPK1-201ENST00000346162 FAM90A22PA8MWA6 464 aa13.19□□□□□ -0.3
SRPK1-201ENST00000346162 FAM90A12PA8MX19 464 aa13.19□□□□□ -0.3
SRPK1-201ENST00000346162 FAM90A5PA8MXJ8 464 aa13.19□□□□□ -0.3
SRPK1-201ENST00000346162 FAM90A23PA8MXZ1 464 aa13.19□□□□□ -0.3
SRPK1-201ENST00000346162 FAM90A26D6RGX4 464 aa13.19□□□□□ -0.3
SRPK1-201ENST00000346162 NKX2-8O15522 239 aa13.19□□□□□ -0.3
SRPK1-201ENST00000346162 FAM90A15PP0C7V4 464 aa13.19□□□□□ -0.3
SRPK1-201ENST00000346162 FAM90A13PP0C7W8 464 aa13.19□□□□□ -0.3
SRPK1-201ENST00000346162 FAM90A14PP0C7W9 464 aa13.19□□□□□ -0.3
SRPK1-201ENST00000346162 FAM90A24PP0C7X0 464 aa13.19□□□□□ -0.3
SRPK1-201ENST00000346162 CEBPDP49716 269 aaPredicted RBP13.19□□□□□ -0.3
SRPK1-201ENST00000346162 TEPPQ6URK8 271 aa13.19□□□□□ -0.3
SRPK1-201ENST00000346162 SHISA5Q8N114 240 aa13.19□□□□□ -0.3
SRPK1-201ENST00000346162 IGLV3-12A0A075B6K2 115 aa13.19□□□□□ -0.3
SRPK1-201ENST00000346162 PDPNQ86YL7 162 aa13.19□□□□□ -0.3
SRPK1-201ENST00000346162 OR51G1Q8NGK1 321 aa13.19□□□□□ -0.3
SRPK1-201ENST00000346162 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.18□□□□□ -0.3
SRPK1-201ENST00000346162 RFPL3SP0C7P2 107 aa13.18□□□□□ -0.3
SRPK1-201ENST00000346162 GPR183P32249 361 aa13.18□□□□□ -0.3
SRPK1-201ENST00000346162 OPRK1P41145 380 aa13.18□□□□□ -0.3
SRPK1-201ENST00000346162 C1orf174Q8IYL3 243 aa13.18□□□□□ -0.3
SRPK1-201ENST00000346162 TMEM116Q8NCL8 245 aa13.18□□□□□ -0.3
SRPK1-201ENST00000346162 TMEM54Q969K7 222 aa13.18□□□□□ -0.3
SRPK1-201ENST00000346162 C20orf144Q9BQM9 153 aa13.18□□□□□ -0.3
SRPK1-201ENST00000346162 PRDM14Q9GZV8 571 aa13.18□□□□□ -0.3
SRPK1-201ENST00000346162 PXMP4Q9Y6I8 212 aa13.18□□□□□ -0.3
SRPK1-201ENST00000346162 ACSF3Q4G176 576 aaPredicted RBP13.18□□□□□ -0.3
SRPK1-201ENST00000346162 C1QL2Q7Z5L3 287 aa13.18□□□□□ -0.3
SRPK1-201ENST00000346162 RNF7Q9UBF6 113 aa13.18□□□□□ -0.3
SRPK1-201ENST00000346162 RPL7P18124 248 aaKnown RBP13.18□□□□□ -0.3
SRPK1-201ENST00000346162 FOXA3P55318 350 aaPredicted RBP13.18□□□□□ -0.3
SRPK1-201ENST00000346162 RSPO4Q2I0M5 234 aaPredicted RBP13.18□□□□□ -0.3
SRPK1-201ENST00000346162 CALHM1Q8IU99 346 aa13.18□□□□□ -0.3
SRPK1-201ENST00000346162 TPRX1Q8N7U7 411 aa13.18□□□□□ -0.3
SRPK1-201ENST00000346162 HILPDAQ9Y5L2 63 aa13.18□□□□□ -0.3
SRPK1-201ENST00000346162 THSD7BQ9C0I4 1608 aa13.18□□□□□ -0.3
SRPK1-201ENST00000346162 A8MWL6 223 aa13.17□□□□□ -0.3
SRPK1-201ENST00000346162 ZNF324O75467 553 aaPredicted RBP13.17□□□□□ -0.3
SRPK1-201ENST00000346162 GNB4Q9HAV0 340 aa13.17□□□□□ -0.3
SRPK1-201ENST00000346162 A0A1B0GW64 132 aa13.17□□□□□ -0.3
SRPK1-201ENST00000346162 TMEM45BQ96B21 275 aa13.17□□□□□ -0.3
SRPK1-201ENST00000346162 LOC389332A0A1B0GUA5 103 aa13.17□□□□□ -0.3
SRPK1-201ENST00000346162 SRSF4Q08170 494 aaKnown RBP13.17□□□□□ -0.3
SRPK1-201ENST00000346162 ZNF841Q6ZN19 808 aa13.17□□□□□ -0.3
SRPK1-201ENST00000346162 RPEQ96AT9 228 aa13.17□□□□□ -0.3
SRPK1-201ENST00000346162 ELOVL5Q9NYP7 299 aa13.17□□□□□ -0.3
SRPK1-201ENST00000346162 PLXNA3P51805 1871 aa13.17□□□□□ -0.3
SRPK1-201ENST00000346162 MRPL14Q6P1L8 145 aaKnown RBP13.17□□□□□ -0.3
SRPK1-201ENST00000346162 SNRNP200O75643 2136 aaKnown RBP13.16□□□□□ -0.3
SRPK1-201ENST00000346162 FAM90A27PA6NNH2 459 aa13.16□□□□□ -0.3
SRPK1-201ENST00000346162 C1QTNF9P0C862 333 aa13.16□□□□□ -0.3
SRPK1-201ENST00000346162 ARL14EPLP0DKL9 152 aa13.16□□□□□ -0.3
SRPK1-201ENST00000346162 RPL31P62899 125 aaKnown RBP13.16□□□□□ -0.3
SRPK1-201ENST00000346162 TM4SF20Q53R12 229 aa13.16□□□□□ -0.3
SRPK1-201ENST00000346162 C5orf30Q96GV9 206 aa13.16□□□□□ -0.3
SRPK1-201ENST00000346162 IL36RNQ9UBH0 155 aa13.16□□□□□ -0.3
SRPK1-201ENST00000346162 TRAV9-1A0A075B6T8 112 aa13.16□□□□□ -0.3
SRPK1-201ENST00000346162 ZIC3O60481 467 aa13.16□□□□□ -0.3
SRPK1-201ENST00000346162 DOLPP1Q86YN1 238 aa13.16□□□□□ -0.3
SRPK1-201ENST00000346162 IMMP1LQ96LU5 166 aa13.16□□□□□ -0.3
SRPK1-201ENST00000346162 OR51B2Q9Y5P1 312 aa13.16□□□□□ -0.3
SRPK1-201ENST00000346162 CDKN1BP46527 198 aa13.16□□□□□ -0.3
SRPK1-201ENST00000346162 MPV17L2Q567V2 206 aa13.16□□□□□ -0.3
SRPK1-201ENST00000346162 SSBP3Q9BWW4 388 aaPredicted RBP13.16□□□□□ -0.3
SRPK1-201ENST00000346162 TCF20Q9UGU0 1960 aaKnown RBP13.16□□□□□ -0.3
SRPK1-201ENST00000346162 SPTBN1Q01082 2364 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms