RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 GUCA2AQ02747 115 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 IGHG2P01859 326 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 SBK3P0C264 359 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 KLF17Q5JT82 389 aaPredicted RBP3.23□□□□□ -1.89
SYNE2-202ENST00000344113 SPEM1Q8N4L4 309 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 OR11H6Q8NGC7 330 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 NEIL2Q969S2 332 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 LRRK1Q38SD2 2015 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 FBXL15Q9H469 300 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 A0A0G2JLL6 359 aaPredicted RBP3.23□□□□□ -1.89
SYNE2-202ENST00000344113 NHLRC1Q6VVB1 395 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 STPG3Q8N7X2 389 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 WIPF2Q8TF74 440 aaPredicted RBP3.23□□□□□ -1.89
SYNE2-202ENST00000344113 NRN1Q9NPD7 142 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 RNF115Q9Y4L5 304 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 KNDC1Q76NI1 1749 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 FABP5P3A8MUU1 101 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 HLA-DMBP28068 263 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 RAE1P78406 368 aaKnown RBP3.23□□□□□ -1.89
SYNE2-202ENST00000344113 B5MCH6 92 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 C9JCJ5 164 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 H0YJW9 148 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 RND3P61587 244 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 ABHD17AQ96GS6 310 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 M0QZ24 198 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 NAT6Q93015 286 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 PGFP49763 221 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 ZXDCQ2QGD7 858 aaPredicted RBP3.23□□□□□ -1.89
SYNE2-202ENST00000344113 Q6ZSR6 202 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 ZNF355PQ9NSJ1 428 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 H7C1H1 209 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 TEX36Q5VZQ5 186 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 FAM90A10PA6NDY2 464 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 FAM90A18PA6NE21 464 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 FAM90A16PA6NEW6 464 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 FAM90A20PA6NIJ5 464 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 FAM90A8PA6NJQ4 464 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 FAM90A7PA6NKC0 464 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 FAM90A22PA8MWA6 464 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 FAM90A12PA8MX19 464 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 FAM90A5PA8MXJ8 464 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 FAM90A23PA8MXZ1 464 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 FAM90A15PP0C7V4 464 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 FAM90A13PP0C7W8 464 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 FAM90A14PP0C7W9 464 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 FAM90A24PP0C7X0 464 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 VMA21Q3ZAQ7 101 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 BCDIN3DQ7Z5W3 292 aaKnown RBP3.23□□□□□ -1.89
SYNE2-202ENST00000344113 HRASLS2Q9NWW9 162 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 IGLON5A6NGN9 336 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 RPS19BP1Q86WX3 136 aaKnown RBP3.23□□□□□ -1.89
SYNE2-202ENST00000344113 TSSC4Q9Y5U2 329 aaPredicted RBP3.23□□□□□ -1.89
SYNE2-202ENST00000344113 MPC1Q9Y5U8 109 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 TRPM3Q9HCF6 1732 aaPredicted RBP3.23□□□□□ -1.89
SYNE2-202ENST00000344113 EDDM3BP56851 147 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 KCNK17Q96T54 332 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 SLC25A37Q9NYZ2 338 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 TRIP12Q14669 1992 aaPredicted RBP3.23□□□□□ -1.89
SYNE2-202ENST00000344113 ZNF142P52746 1687 aaPredicted RBP3.23□□□□□ -1.89
SYNE2-202ENST00000344113 PRSS37A4D1T9 235 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 GOLT1AQ6ZVE7 132 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 GPR27Q9NS67 375 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 MYADML2A6NDP7 307 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 TPRX1Q8N7U7 411 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 C1orf162Q8NEQ5 155 aaPredicted RBP3.23□□□□□ -1.89
SYNE2-202ENST00000344113 PLEKHB2Q96CS7 222 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 J3QW42 95 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 MOSP00540 346 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 SCARF1Q14162 830 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 TMEM78Q5T7P6 136 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 C11orf44Q8N8P7 122 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 RPS21P63220 83 aaKnown RBP3.23□□□□□ -1.89
SYNE2-202ENST00000344113 MSRB3Q8IXL7 192 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 FAM174AQ8TBP5 190 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 PRADC1Q9BSG0 188 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 OSTCQ9NRP0 149 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 SLAMF8Q9P0V8 285 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 H3BSH0 61 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 DXOO77932 396 aaKnown RBP3.22□□□□□ -1.89
SYNE2-202ENST00000344113 C2orf68Q2NKX9 166 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 SPATA31B1PQ5VZV4 182 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 DGAT2L7PQ6IED9 249 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 SAXO1Q8IYX7 474 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 MED20Q9H944 212 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 RPUSD1Q9UJJ7 312 aaKnown RBP3.22□□□□□ -1.89
SYNE2-202ENST00000344113 TMEM207Q6UWW9 146 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 NRGNQ92686 78 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 TRGV10A0A0A0MS01 117 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 LOC389332A0A1B0GUA5 103 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 IGLC7A0M8Q6 106 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 K7EQS6 105 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 IGKCP01834 107 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 WFDC8Q8IUA0 241 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 TAF15Q92804 592 aaKnown RBP eCLIP3.22□□□□□ -1.89
SYNE2-202ENST00000344113 TRBV5-5A0A0J9YX44 114 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 CXCL10P02778 98 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 RBMY1FQ15415 496 aaKnown RBP3.22□□□□□ -1.89
SYNE2-202ENST00000344113 MMD2Q8IY49 270 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 TMEM252Q8N6L7 170 aa3.22□□□□□ -1.89
SYNE2-202ENST00000344113 YPEL2Q96QA6 119 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms