RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 TNFRSF19Q9NS68 423 aa8.1□□□□□ -1.11
PTCHD4-201ENST00000339488 DEPPQ9NTK1 212 aa8.1□□□□□ -1.11
PTCHD4-201ENST00000339488 EYSQ5T1H1 3165 aa8.1□□□□□ -1.11
PTCHD4-201ENST00000339488 KLK10O43240 276 aa8.09□□□□□ -1.11
PTCHD4-201ENST00000339488 ARL3P36405 182 aa8.09□□□□□ -1.11
PTCHD4-201ENST00000339488 TMEM92Q6UXU6 159 aa8.09□□□□□ -1.11
PTCHD4-201ENST00000339488 BCORP1Q8N888 145 aa8.09□□□□□ -1.11
PTCHD4-201ENST00000339488 GALMQ96C23 342 aa8.09□□□□□ -1.11
PTCHD4-201ENST00000339488 NDFIP1Q9BT67 221 aa8.09□□□□□ -1.11
PTCHD4-201ENST00000339488 SSBP3Q9BWW4 388 aaPredicted RBP8.09□□□□□ -1.11
PTCHD4-201ENST00000339488 IGFLR1Q9H665 355 aa8.09□□□□□ -1.11
PTCHD4-201ENST00000339488 SPANXB1Q9NS25 103 aaPredicted RBP8.09□□□□□ -1.11
PTCHD4-201ENST00000339488 C19orf25Q9UFG5 118 aaPredicted RBP8.09□□□□□ -1.11
PTCHD4-201ENST00000339488 V9GYV3 84 aa8.09□□□□□ -1.11
PTCHD4-201ENST00000339488 TET1Q8NFU7 2136 aa8.09□□□□□ -1.11
PTCHD4-201ENST00000339488 H3BRM9 83 aa8.09□□□□□ -1.11
PTCHD4-201ENST00000339488 RER1O15258 196 aa8.09□□□□□ -1.11
PTCHD4-201ENST00000339488 IGHG1P01857 330 aa8.09□□□□□ -1.11
PTCHD4-201ENST00000339488 SLC35E2P0CK97 266 aa8.09□□□□□ -1.11
PTCHD4-201ENST00000339488 KCNIP1Q9NZI2 227 aa8.09□□□□□ -1.11
PTCHD4-201ENST00000339488 KCNS2Q9ULS6 477 aa8.09□□□□□ -1.11
PTCHD4-201ENST00000339488 R4GN57 208 aa8.09□□□□□ -1.11
PTCHD4-201ENST00000339488 UNC13CQ8NB66 2214 aa8.09□□□□□ -1.11
PTCHD4-201ENST00000339488 KNL1Q8NG31 2342 aa8.09□□□□□ -1.11
PTCHD4-201ENST00000339488 FAM90A27PA6NNH2 459 aa8.08□□□□□ -1.12
PTCHD4-201ENST00000339488 OR11H12B2RN74 326 aa8.08□□□□□ -1.12
PTCHD4-201ENST00000339488 TNFRSF13BO14836 293 aaPredicted RBP8.08□□□□□ -1.12
PTCHD4-201ENST00000339488 DEGS1O15121 323 aa8.08□□□□□ -1.12
PTCHD4-201ENST00000339488 SYNGR2O43760 224 aa8.08□□□□□ -1.12
PTCHD4-201ENST00000339488 PSG2P11465 335 aa8.08□□□□□ -1.12
PTCHD4-201ENST00000339488 FOXA3P55318 350 aaPredicted RBP8.08□□□□□ -1.12
PTCHD4-201ENST00000339488 CEACAM16Q2WEN9 425 aa8.08□□□□□ -1.12
PTCHD4-201ENST00000339488 IGF2-ASQ6U949 168 aa8.08□□□□□ -1.12
PTCHD4-201ENST00000339488 Q6ZNB5 142 aa8.08□□□□□ -1.12
PTCHD4-201ENST00000339488 ZNF611Q8N823 705 aa8.08□□□□□ -1.12
PTCHD4-201ENST00000339488 MRPL43Q8N983 215 aaKnown RBP8.08□□□□□ -1.12
PTCHD4-201ENST00000339488 NHLRC2Q8NBF2 726 aa8.08□□□□□ -1.12
PTCHD4-201ENST00000339488 OR11H1Q8NG94 326 aa8.08□□□□□ -1.12
PTCHD4-201ENST00000339488 OR11H2Q8NH07 326 aa8.08□□□□□ -1.12
PTCHD4-201ENST00000339488 OR10D3Q8NH80 312 aa8.08□□□□□ -1.12
PTCHD4-201ENST00000339488 SPSB4Q96A44 273 aa8.08□□□□□ -1.12
PTCHD4-201ENST00000339488 ABHD17AQ96GS6 310 aa8.08□□□□□ -1.12
PTCHD4-201ENST00000339488 ANAPC13Q9BS18 74 aa8.08□□□□□ -1.12
PTCHD4-201ENST00000339488 YAE1D1Q9NRH1 226 aa8.08□□□□□ -1.12
PTCHD4-201ENST00000339488 TMEM140Q9NV12 185 aa8.08□□□□□ -1.12
PTCHD4-201ENST00000339488 RABAC1Q9UI14 185 aa8.08□□□□□ -1.12
PTCHD4-201ENST00000339488 F11RQ9Y624 299 aaKnown RBP8.08□□□□□ -1.12
PTCHD4-201ENST00000339488 LRRK1Q38SD2 2015 aa8.08□□□□□ -1.12
PTCHD4-201ENST00000339488 SYS1-DBNDD2H3BUS1 97 aa8.08□□□□□ -1.12
PTCHD4-201ENST00000339488 LAMTOR5O43504 91 aa8.08□□□□□ -1.12
PTCHD4-201ENST00000339488 HLA-DRB1P01911 266 aa8.08□□□□□ -1.12
PTCHD4-201ENST00000339488 FABP2P12104 132 aa8.08□□□□□ -1.12
PTCHD4-201ENST00000339488 ARL4DP49703 201 aa8.08□□□□□ -1.12
PTCHD4-201ENST00000339488 EDDM3BP56851 147 aa8.08□□□□□ -1.12
PTCHD4-201ENST00000339488 HBG1P69891 147 aa8.08□□□□□ -1.12
PTCHD4-201ENST00000339488 HBG2P69892 147 aa8.08□□□□□ -1.12
PTCHD4-201ENST00000339488 ZXDAP98168 799 aa8.08□□□□□ -1.12
PTCHD4-201ENST00000339488 FAM120AOSQ5T036 256 aa8.08□□□□□ -1.12
PTCHD4-201ENST00000339488 SPACA3Q8IXA5 215 aa8.08□□□□□ -1.12
PTCHD4-201ENST00000339488 CA13Q8N1Q1 262 aa8.08□□□□□ -1.12
PTCHD4-201ENST00000339488 OSR1Q8TAX0 266 aaPredicted RBP8.08□□□□□ -1.12
PTCHD4-201ENST00000339488 Q96M66 194 aa8.08□□□□□ -1.12
PTCHD4-201ENST00000339488 MS4A5Q9H3V2 200 aa8.08□□□□□ -1.12
PTCHD4-201ENST00000339488 IL36GQ9NZH8 169 aa8.08□□□□□ -1.12
PTCHD4-201ENST00000339488 CFAP54Q96N23 3096 aa8.08□□□□□ -1.12
PTCHD4-201ENST00000339488 CHD9Q3L8U1 2897 aa8.08□□□□□ -1.12
PTCHD4-201ENST00000339488 H3BMH7 237 aa8.08□□□□□ -1.12
PTCHD4-201ENST00000339488 RRHO14718 337 aa8.08□□□□□ -1.12
PTCHD4-201ENST00000339488 REG1AP05451 166 aa8.08□□□□□ -1.12
PTCHD4-201ENST00000339488 VDAC2P45880 294 aaPredicted RBP8.08□□□□□ -1.12
PTCHD4-201ENST00000339488 ZNF138P52744 262 aa8.08□□□□□ -1.12
PTCHD4-201ENST00000339488 RPL31P62899 125 aaKnown RBP8.08□□□□□ -1.12
PTCHD4-201ENST00000339488 SLC35E4Q6ICL7 350 aa8.08□□□□□ -1.12
PTCHD4-201ENST00000339488 AMTNQ6UX39 209 aa8.08□□□□□ -1.12
PTCHD4-201ENST00000339488 C8orf86Q6ZUL3 223 aa8.08□□□□□ -1.12
PTCHD4-201ENST00000339488 OR5A1Q8NGJ0 315 aa8.08□□□□□ -1.12
PTCHD4-201ENST00000339488 BADQ92934 168 aa8.08□□□□□ -1.12
PTCHD4-201ENST00000339488 LSM10Q969L4 123 aaKnown RBP8.08□□□□□ -1.12
PTCHD4-201ENST00000339488 URB1-AS1Q96HZ7 61 aa8.08□□□□□ -1.12
PTCHD4-201ENST00000339488 CRISPLD2Q9H0B8 497 aa8.08□□□□□ -1.12
PTCHD4-201ENST00000339488 TXNIPQ9H3M7 391 aa8.08□□□□□ -1.12
PTCHD4-201ENST00000339488 ERG28Q9UKR5 140 aa8.08□□□□□ -1.12
PTCHD4-201ENST00000339488 ZNF716A6NP11 495 aa8.07□□□□□ -1.12
PTCHD4-201ENST00000339488 NPIPB5A8MRT5 1133 aa8.07□□□□□ -1.12
PTCHD4-201ENST00000339488 M0QXV9 152 aa8.07□□□□□ -1.12
PTCHD4-201ENST00000339488 CER1O95813 267 aa8.07□□□□□ -1.12
PTCHD4-201ENST00000339488 SEC11AP67812 179 aa8.07□□□□□ -1.12
PTCHD4-201ENST00000339488 FUT7Q11130 342 aa8.07□□□□□ -1.12
PTCHD4-201ENST00000339488 C3AR1Q16581 482 aa8.07□□□□□ -1.12
PTCHD4-201ENST00000339488 GDF5OSQ5U4N7 250 aa8.07□□□□□ -1.12
PTCHD4-201ENST00000339488 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.07□□□□□ -1.126e-8■■■□□ 14.6
PTCHD4-201ENST00000339488 Q6ZSR6 202 aa8.07□□□□□ -1.12
PTCHD4-201ENST00000339488 C3orf56Q8N813 242 aa8.07□□□□□ -1.12
PTCHD4-201ENST00000339488 ZNF418Q8TF45 676 aaPredicted RBP8.07□□□□□ -1.12
PTCHD4-201ENST00000339488 C5orf30Q96GV9 206 aa8.07□□□□□ -1.12
PTCHD4-201ENST00000339488 C1QTNF5Q9BXJ0 243 aa8.07□□□□□ -1.12
PTCHD4-201ENST00000339488 RALYQ9UKM9 306 aaKnown RBP8.07□□□□□ -1.12
PTCHD4-201ENST00000339488 YTHDF2Q9Y5A9 579 aaKnown RBP8.07□□□□□ -1.12
PTCHD4-201ENST00000339488 TGFBR3LH3BV60 316 aa8.07□□□□□ -1.12
PTCHD4-201ENST00000339488 ARL14EPLP0DKL9 152 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms