RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 PTTG1IPP53801 180 aa6.9□□□□□ -1.3
HPS4-201ENST00000336873 OR5I1Q13606 314 aa6.9□□□□□ -1.3
HPS4-201ENST00000336873 LBHQ53QV2 105 aaPredicted RBP6.9□□□□□ -1.3
HPS4-201ENST00000336873 DUX4L9Q6RFH8 374 aaPredicted RBP6.9□□□□□ -1.3
HPS4-201ENST00000336873 Q8IYB0 196 aa6.9□□□□□ -1.3
HPS4-201ENST00000336873 OR10A7Q8NGE5 316 aa6.9□□□□□ -1.3
HPS4-201ENST00000336873 BCL2L2Q92843 193 aaPredicted RBP6.9□□□□□ -1.3
HPS4-201ENST00000336873 GMPPAQ96IJ6 420 aaPredicted RBP6.9□□□□□ -1.3
HPS4-201ENST00000336873 TMEM147Q9BVK8 224 aa6.9□□□□□ -1.3
HPS4-201ENST00000336873 CXXC4Q9H2H0 198 aa6.9□□□□□ -1.3
HPS4-201ENST00000336873 PRO3102Q9H379 93 aa6.9□□□□□ -1.3
HPS4-201ENST00000336873 IL36GQ9NZH8 169 aa6.9□□□□□ -1.3
HPS4-201ENST00000336873 LINC00473A8K010 186 aa6.9□□□□□ -1.3
HPS4-201ENST00000336873 IFNL4K9M1U5 179 aa6.9□□□□□ -1.3
HPS4-201ENST00000336873 CD59P13987 128 aa6.9□□□□□ -1.3
HPS4-201ENST00000336873 TNFSF10P50591 281 aa6.9□□□□□ -1.3
HPS4-201ENST00000336873 KHDC3LQ587J8 217 aa6.9□□□□□ -1.3
HPS4-201ENST00000336873 PCSK4Q6UW60 755 aa6.9□□□□□ -1.3
HPS4-201ENST00000336873 TOMM20LQ6UXN7 152 aa6.9□□□□□ -1.3
HPS4-201ENST00000336873 BHLHA15Q7RTS1 189 aaPredicted RBP6.9□□□□□ -1.3
HPS4-201ENST00000336873 MOB3BQ86TA1 216 aa6.9□□□□□ -1.3
HPS4-201ENST00000336873 OR2T10Q8NGZ9 312 aa6.9□□□□□ -1.3
HPS4-201ENST00000336873 CLDND2Q8NHS1 167 aa6.9□□□□□ -1.3
HPS4-201ENST00000336873 C22orf15Q8WYQ4 148 aa6.9□□□□□ -1.3
HPS4-201ENST00000336873 WDR61Q9GZS3 305 aaKnown RBP6.9□□□□□ -1.3
HPS4-201ENST00000336873 LRP4O75096 1905 aa6.9□□□□□ -1.31
HPS4-201ENST00000336873 A0A1W2PNU3 283 aaPredicted RBP6.9□□□□□ -1.31
HPS4-201ENST00000336873 FAM90A27PA6NNH2 459 aa6.9□□□□□ -1.31
HPS4-201ENST00000336873 A8MXE2 369 aa6.9□□□□□ -1.31
HPS4-201ENST00000336873 LYNX1G3V0Z9 82 aa6.9□□□□□ -1.31
HPS4-201ENST00000336873 CNIH1O95406 144 aa6.9□□□□□ -1.31
HPS4-201ENST00000336873 ARL14EPLP0DKL9 152 aa6.9□□□□□ -1.31
HPS4-201ENST00000336873 LYNX1P0DP58 116 aa6.9□□□□□ -1.31
HPS4-201ENST00000336873 IER3P46695 156 aa6.9□□□□□ -1.31
HPS4-201ENST00000336873 PEAR1Q5VY43 1037 aaPredicted RBP6.9□□□□□ -1.31
HPS4-201ENST00000336873 ZNF324BQ6AW86 544 aaPredicted RBP6.9□□□□□ -1.31
HPS4-201ENST00000336873 MRGPRGQ86SM5 289 aa6.9□□□□□ -1.31
HPS4-201ENST00000336873 WDR86Q86TI4 376 aa6.9□□□□□ -1.31
HPS4-201ENST00000336873 H1FOOQ8IZA3 346 aaPredicted RBP6.9□□□□□ -1.31
HPS4-201ENST00000336873 ZNF525Q8N782 197 aa6.9□□□□□ -1.31
HPS4-201ENST00000336873 OR8G5Q8NG78 346 aa6.9□□□□□ -1.31
HPS4-201ENST00000336873 NEIL1Q96FI4 390 aaPredicted RBP6.9□□□□□ -1.31
HPS4-201ENST00000336873 BTF3L4Q96K17 158 aa6.9□□□□□ -1.31
HPS4-201ENST00000336873 SSBP3Q9BWW4 388 aaPredicted RBP6.9□□□□□ -1.31
HPS4-201ENST00000336873 NAT8BQ9UHF3 227 aa6.9□□□□□ -1.31
HPS4-201ENST00000336873 IGHV3OR16-8A0A075B7F1 116 aa6.89□□□□□ -1.31
HPS4-201ENST00000336873 FCN1O00602 326 aa6.89□□□□□ -1.31
HPS4-201ENST00000336873 SIAH2O43255 324 aa6.89□□□□□ -1.31
HPS4-201ENST00000336873 HIST1H2BKO60814 126 aa6.89□□□□□ -1.31
HPS4-201ENST00000336873 MT-CO2P00403 227 aa6.89□□□□□ -1.31
HPS4-201ENST00000336873 HIST1H2BJP06899 126 aa6.89□□□□□ -1.31
HPS4-201ENST00000336873 CYC1P08574 325 aa6.89□□□□□ -1.31
HPS4-201ENST00000336873 C1QTNF9P0C862 333 aa6.89□□□□□ -1.31
HPS4-201ENST00000336873 ZNF883P0CG24 379 aa6.89□□□□□ -1.31
HPS4-201ENST00000336873 HIST1H2BOP23527 126 aa6.89□□□□□ -1.31
HPS4-201ENST00000336873 MPZP25189 248 aa6.89□□□□□ -1.31
HPS4-201ENST00000336873 HIST1H2BBP33778 126 aa6.89□□□□□ -1.31
HPS4-201ENST00000336873 UCP3P55916 312 aa6.89□□□□□ -1.31
HPS4-201ENST00000336873 HIST1H2BDP58876 126 aa6.89□□□□□ -1.31
HPS4-201ENST00000336873 HIST1H2BCP62807 126 aa6.89□□□□□ -1.31
HPS4-201ENST00000336873 HIST2H2BEQ16778 126 aa6.89□□□□□ -1.31
HPS4-201ENST00000336873 NMSQ5H8A3 153 aa6.89□□□□□ -1.31
HPS4-201ENST00000336873 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.89□□□□□ -1.31
HPS4-201ENST00000336873 DOLPP1Q86YN1 238 aa6.89□□□□□ -1.31
HPS4-201ENST00000336873 HIST1H2BHQ93079 126 aa6.89□□□□□ -1.31
HPS4-201ENST00000336873 HIST1H2BNQ99877 126 aa6.89□□□□□ -1.31
HPS4-201ENST00000336873 HIST1H2BMQ99879 126 aa6.89□□□□□ -1.31
HPS4-201ENST00000336873 PAM16Q9Y3D7 125 aa6.89□□□□□ -1.31
HPS4-201ENST00000336873 LRRC30A6NM36 301 aa6.89□□□□□ -1.31
HPS4-201ENST00000336873 CDX4O14627 284 aaPredicted RBP6.89□□□□□ -1.31
HPS4-201ENST00000336873 PRRG2O14669 202 aa6.89□□□□□ -1.31
HPS4-201ENST00000336873 IGKV1-39P01597 117 aa6.89□□□□□ -1.31
HPS4-201ENST00000336873 IGKV1D-39P04432 117 aa6.89□□□□□ -1.31
HPS4-201ENST00000336873 CD24P25063 80 aa6.89□□□□□ -1.31
HPS4-201ENST00000336873 CHRNB4P30926 498 aa6.89□□□□□ -1.31
HPS4-201ENST00000336873 ELOBQ15370 118 aa6.89□□□□□ -1.31
HPS4-201ENST00000336873 TMEM42Q69YG0 159 aa6.89□□□□□ -1.31
HPS4-201ENST00000336873 TGIF2LYQ8IUE0 185 aa6.89□□□□□ -1.31
HPS4-201ENST00000336873 TMEM56Q96MV1 263 aa6.89□□□□□ -1.31
HPS4-201ENST00000336873 SLC35D1Q9NTN3 355 aa6.89□□□□□ -1.31
HPS4-201ENST00000336873 METTL1Q9UBP6 276 aaKnown RBP6.89□□□□□ -1.31
HPS4-201ENST00000336873 RNF24Q9Y225 148 aa6.89□□□□□ -1.31
HPS4-201ENST00000336873 TMEM56-RWDD3S4R434 201 aa6.89□□□□□ -1.31
HPS4-201ENST00000336873 C20orf202A1L168 122 aa6.89□□□□□ -1.31
HPS4-201ENST00000336873 SOD3P08294 240 aa6.89□□□□□ -1.31
HPS4-201ENST00000336873 CCL3L1P16619 93 aa6.89□□□□□ -1.31
HPS4-201ENST00000336873 RANP62826 216 aaKnown RBP6.89□□□□□ -1.31
HPS4-201ENST00000336873 ANKRD39Q53RE8 183 aa6.89□□□□□ -1.31
HPS4-201ENST00000336873 SPSB3Q6PJ21 355 aa6.89□□□□□ -1.31
HPS4-201ENST00000336873 GFRALQ6UXV0 394 aa6.89□□□□□ -1.31
HPS4-201ENST00000336873 ZNF355PQ9NSJ1 428 aa6.89□□□□□ -1.31
HPS4-201ENST00000336873 ZNF835Q9Y2P0 537 aa6.89□□□□□ -1.31
HPS4-201ENST00000336873 PXMP4Q9Y6I8 212 aa6.89□□□□□ -1.31
HPS4-201ENST00000336873 J3QR06 171 aa6.88□□□□□ -1.31
HPS4-201ENST00000336873 MLNRO43193 412 aa6.88□□□□□ -1.31
HPS4-201ENST00000336873 CBLN1P23435 193 aa6.88□□□□□ -1.31
HPS4-201ENST00000336873 CFPP27918 469 aa6.88□□□□□ -1.31
HPS4-201ENST00000336873 SRSF4Q08170 494 aaKnown RBP6.88□□□□□ -1.31
HPS4-201ENST00000336873 IL15RAQ13261 267 aa6.88□□□□□ -1.31
HPS4-201ENST00000336873 P2RY6Q15077 328 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms