RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 NGFP01138 241 aa15.09■□□□□ 0.01
CLSTN3-202ENST00000331148 CDKN1BP46527 198 aa15.09■□□□□ 0.01
CLSTN3-202ENST00000331148 CYB561P49447 251 aa15.09■□□□□ 0.01
CLSTN3-202ENST00000331148 GNG3P63215 75 aa15.09■□□□□ 0.01
CLSTN3-202ENST00000331148 ARF1P84077 181 aaKnown RBP15.09■□□□□ 0.01
CLSTN3-202ENST00000331148 NRN1LQ496H8 165 aa15.09■□□□□ 0.01
CLSTN3-202ENST00000331148 MCEMP1Q8IX19 187 aa15.09■□□□□ 0.01
CLSTN3-202ENST00000331148 MMD2Q8IY49 270 aa15.09■□□□□ 0.01
CLSTN3-202ENST00000331148 APH1AQ96BI3 265 aa15.09■□□□□ 0.01
CLSTN3-202ENST00000331148 OR2D2Q9H210 308 aa15.09■□□□□ 0.01
CLSTN3-202ENST00000331148 YTHDF2Q9Y5A9 579 aaKnown RBP15.09■□□□□ 0.01
CLSTN3-202ENST00000331148 TRAV34A0A0B4J273 112 aa15.09■□□□□ 0.01
CLSTN3-202ENST00000331148 A0A0G2JMM0 328 aa15.09■□□□□ 0.01
CLSTN3-202ENST00000331148 A0A1W2PPB8 328 aa15.09■□□□□ 0.01
CLSTN3-202ENST00000331148 A0A1W2PRS3 328 aa15.09■□□□□ 0.01
CLSTN3-202ENST00000331148 KIR3DP1A8MWS1 328 aa15.09■□□□□ 0.01
CLSTN3-202ENST00000331148 RRHO14718 337 aa15.09■□□□□ 0.01
CLSTN3-202ENST00000331148 STAG3L2P0CL84 134 aa15.09■□□□□ 0.01
CLSTN3-202ENST00000331148 STAG3L3P0CL85 134 aa15.09■□□□□ 0.01
CLSTN3-202ENST00000331148 PMCHP20382 165 aa15.09■□□□□ 0.01
CLSTN3-202ENST00000331148 UBE2V1Q13404 147 aa15.09■□□□□ 0.01
CLSTN3-202ENST00000331148 ZNF718Q3SXZ3 478 aa15.09■□□□□ 0.01
CLSTN3-202ENST00000331148 C9orf135Q5VTT2 229 aa15.09■□□□□ 0.01
CLSTN3-202ENST00000331148 ZNF808Q8N4W9 903 aaPredicted RBP15.09■□□□□ 0.01
CLSTN3-202ENST00000331148 ST6GALNAC3Q8NDV1 305 aa15.09■□□□□ 0.01
CLSTN3-202ENST00000331148 PRRG4Q9BZD6 226 aa15.09■□□□□ 0.01
CLSTN3-202ENST00000331148 TUBG2Q9NRH3 451 aa15.09■□□□□ 0.01
CLSTN3-202ENST00000331148 OR5B21A6NL26 309 aa15.08■□□□□ 0
CLSTN3-202ENST00000331148 A8MXE2 369 aa15.08■□□□□ 0
CLSTN3-202ENST00000331148 RAB29O14966 203 aa15.08■□□□□ 0
CLSTN3-202ENST00000331148 RBMXL2O75526 392 aaKnown RBP15.08■□□□□ 0
CLSTN3-202ENST00000331148 CXorf1O96002 111 aa15.08■□□□□ 0
CLSTN3-202ENST00000331148 SRD5A2P31213 254 aa15.08■□□□□ 0
CLSTN3-202ENST00000331148 TGFBR3Q03167 851 aa15.08■□□□□ 0
CLSTN3-202ENST00000331148 EIF4EBP1Q13541 118 aaPredicted RBP15.08■□□□□ 0
CLSTN3-202ENST00000331148 RCHY1Q96PM5 261 aa15.08■□□□□ 0
CLSTN3-202ENST00000331148 PKIBQ9C010 78 aa15.08■□□□□ 0
CLSTN3-202ENST00000331148 MBNL3Q9NUK0 354 aaKnown RBP15.08■□□□□ 0
CLSTN3-202ENST00000331148 DOCK10Q96BY6 2186 aa15.08■□□□□ 0
CLSTN3-202ENST00000331148 A0A1W2PS18 150 aa15.08■□□□□ 0
CLSTN3-202ENST00000331148 ANKRD30BLA7E2S9 258 aa15.08■□□□□ 0
CLSTN3-202ENST00000331148 C17orf98A8MV24 154 aa15.08■□□□□ 0
CLSTN3-202ENST00000331148 CLDN14O95500 239 aa15.08■□□□□ 0
CLSTN3-202ENST00000331148 OR2H2O95918 312 aa15.08■□□□□ 0
CLSTN3-202ENST00000331148 BRWD1-AS2P59051 145 aa15.08■□□□□ 0
CLSTN3-202ENST00000331148 RPP30P78346 268 aaKnown RBP15.08■□□□□ 0
CLSTN3-202ENST00000331148 OR10J3Q5JRS4 329 aa15.08■□□□□ 0
CLSTN3-202ENST00000331148 OR8I2Q8N0Y5 310 aa15.08■□□□□ 0
CLSTN3-202ENST00000331148 ZBTB34Q8NCN2 500 aa15.08■□□□□ 0
CLSTN3-202ENST00000331148 COX11Q9Y6N1 276 aa15.08■□□□□ 0
CLSTN3-202ENST00000331148 OPRK1P41145 380 aa15.07■□□□□ 0
CLSTN3-202ENST00000331148 RPL31P62899 125 aaKnown RBP15.07■□□□□ 0
CLSTN3-202ENST00000331148 IGFBP7Q16270 282 aa15.07■□□□□ 0
CLSTN3-202ENST00000331148 ABHD17BQ5VST6 288 aa15.07■□□□□ 0
CLSTN3-202ENST00000331148 UNQ5815/PRO19632Q6UWF5 114 aa15.07■□□□□ 0
CLSTN3-202ENST00000331148 Q6ZVH6 145 aa15.07■□□□□ 0
CLSTN3-202ENST00000331148 H2BFWTQ7Z2G1 175 aa15.07■□□□□ 0
CLSTN3-202ENST00000331148 NAT8BQ9UHF3 227 aa15.07■□□□□ 0
CLSTN3-202ENST00000331148 V9GYV3 84 aa15.07■□□□□ 0
CLSTN3-202ENST00000331148 ZNF503-AS2A6NEH8 195 aa15.06■□□□□ 0
CLSTN3-202ENST00000331148 NEURL1O76050 574 aa15.06■□□□□ 0
CLSTN3-202ENST00000331148 C3orf79P0CE67 100 aa15.06■□□□□ 0
CLSTN3-202ENST00000331148 RAC2P15153 192 aa15.06■□□□□ 0
CLSTN3-202ENST00000331148 ZNF83P51522 516 aa15.06■□□□□ 0
CLSTN3-202ENST00000331148 HTD2P86397 168 aa15.06■□□□□ 0
CLSTN3-202ENST00000331148 CATR1Q13166 79 aa15.06■□□□□ 0
CLSTN3-202ENST00000331148 FER1L6-AS2Q96M78 137 aa15.06■□□□□ 0
CLSTN3-202ENST00000331148 FAM166BA8MTA8 275 aa15.06■□□□□ 0
CLSTN3-202ENST00000331148 C9JCJ5 164 aa15.06■□□□□ 0
CLSTN3-202ENST00000331148 J3QT63 122 aa15.06■□□□□ 0
CLSTN3-202ENST00000331148 ZNF324O75467 553 aaPredicted RBP15.06■□□□□ 0
CLSTN3-202ENST00000331148 MT-ND6P03923 174 aa15.06■□□□□ 0
CLSTN3-202ENST00000331148 CEACAM8P31997 349 aaPredicted RBP15.06■□□□□ 0
CLSTN3-202ENST00000331148 HINT1P49773 126 aaPredicted RBP15.06■□□□□ 0
CLSTN3-202ENST00000331148 KLHDC1Q8N7A1 406 aa15.06■□□□□ 0
CLSTN3-202ENST00000331148 EAF1Q96JC9 268 aaPredicted RBP15.06■□□□□ 0
CLSTN3-202ENST00000331148 MPC1Q9Y5U8 109 aa15.06■□□□□ 0
CLSTN3-202ENST00000331148 LY96Q9Y6Y9 160 aa15.06■□□□□ 0
CLSTN3-202ENST00000331148 LOC105371242A0A075B767 164 aa15.05■□□□□ 0
CLSTN3-202ENST00000331148 CA6P23280 308 aa15.05■□□□□ 0
CLSTN3-202ENST00000331148 TSPOP30536 169 aa15.05■□□□□ 0
CLSTN3-202ENST00000331148 PRRX1P54821 245 aa15.05■□□□□ 0
CLSTN3-202ENST00000331148 WDR73Q6P4I2 378 aa15.05■□□□□ 0
CLSTN3-202ENST00000331148 NIT1Q86X76 327 aa15.05■□□□□ 0
CLSTN3-202ENST00000331148 LYG1Q8N1E2 194 aa15.05■□□□□ 0
CLSTN3-202ENST00000331148 TCTEX1D1Q8N7M0 179 aa15.05■□□□□ 0
CLSTN3-202ENST00000331148 ZNF738Q8NE65 137 aa15.05■□□□□ 0
CLSTN3-202ENST00000331148 C11orf52Q96A22 123 aa15.05■□□□□ 0
CLSTN3-202ENST00000331148 ALKBH7Q9BT30 221 aaPredicted RBP15.05■□□□□ 0
CLSTN3-202ENST00000331148 WNT10AQ9GZT5 417 aa15.05■□□□□ 0
CLSTN3-202ENST00000331148 ABI3Q9P2A4 366 aa15.05■□□□□ 0
CLSTN3-202ENST00000331148 DPRXA6NFQ7 191 aa15.05■□□□□ -0
CLSTN3-202ENST00000331148 TM4SF5O14894 197 aa15.05■□□□□ -0
CLSTN3-202ENST00000331148 MPDU1O75352 247 aa15.05■□□□□ -0
CLSTN3-202ENST00000331148 NHLH1Q02575 133 aa15.05■□□□□ -0
CLSTN3-202ENST00000331148 KIAA1644Q3SXP7 199 aa15.05■□□□□ -0
CLSTN3-202ENST00000331148 TMEM136Q6ZRR5 245 aa15.05■□□□□ -0
CLSTN3-202ENST00000331148 TMEM45BQ96B21 275 aa15.05■□□□□ -0
CLSTN3-202ENST00000331148 DEPPQ9NTK1 212 aa15.05■□□□□ -0
CLSTN3-202ENST00000331148 MRPS16Q9Y3D3 137 aaKnown RBP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms