RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 IGLL1P15814 213 aa20.33■□□□□ 0.85
SOX1-201ENST00000330949 VHLLQ6RSH7 139 aa20.33■□□□□ 0.85
SOX1-201ENST00000330949 DEFB126Q9BYW3 111 aa20.33■□□□□ 0.85
SOX1-201ENST00000330949 OR2D2Q9H210 308 aa20.33■□□□□ 0.85
SOX1-201ENST00000330949 SPINK4O60575 86 aa20.33■□□□□ 0.84
SOX1-201ENST00000330949 OR4A47Q6IF82 309 aa20.33■□□□□ 0.84
SOX1-201ENST00000330949 ZNF596Q8TC21 504 aa20.33■□□□□ 0.84
SOX1-201ENST00000330949 C19orf25Q9UFG5 118 aaPredicted RBP20.33■□□□□ 0.84
SOX1-201ENST00000330949 HLA-BQ31612 363 aa20.32■□□□□ 0.84
SOX1-201ENST00000330949 RBMXL2O75526 392 aaKnown RBP20.32■□□□□ 0.84
SOX1-201ENST00000330949 COLCA1Q6ZS62 124 aa20.32■□□□□ 0.84
SOX1-201ENST00000330949 SCCPDHQ8NBX0 429 aa20.32■□□□□ 0.84
SOX1-201ENST00000330949 DKK1O94907 266 aa20.31■□□□□ 0.84
SOX1-201ENST00000330949 LINC00869P0C866 280 aa20.31■□□□□ 0.84
SOX1-201ENST00000330949 PDLIM3Q53GG5 364 aaPredicted RBP20.31■□□□□ 0.84
SOX1-201ENST00000330949 BCL2L2Q92843 193 aaPredicted RBP20.31■□□□□ 0.84
SOX1-201ENST00000330949 ZNHIT1O43257 154 aa20.31■□□□□ 0.84
SOX1-201ENST00000330949 S100A7P31151 101 aa20.31■□□□□ 0.84
SOX1-201ENST00000330949 ZNF816Q0VGE8 651 aaPredicted RBP20.31■□□□□ 0.84
SOX1-201ENST00000330949 CEACAM16Q2WEN9 425 aa20.31■□□□□ 0.84
SOX1-201ENST00000330949 HES4Q9HCC6 221 aa20.31■□□□□ 0.84
SOX1-201ENST00000330949 A0A0J9YW62 118 aa20.31■□□□□ 0.84
SOX1-201ENST00000330949 RRHO14718 337 aa20.31■□□□□ 0.84
SOX1-201ENST00000330949 TAX1BP3O14907 124 aa20.31■□□□□ 0.84
SOX1-201ENST00000330949 MT-CO2P00403 227 aa20.31■□□□□ 0.84
SOX1-201ENST00000330949 ZBTB34Q8NCN2 500 aa20.31■□□□□ 0.84
SOX1-201ENST00000330949 GTF3C1Q12789 2109 aa20.3■□□□□ 0.84
SOX1-201ENST00000330949 Q56UQ5 140 aa20.3■□□□□ 0.84
SOX1-201ENST00000330949 SRXN1Q9BYN0 137 aa20.3■□□□□ 0.84
SOX1-201ENST00000330949 TRAPPC2LQ9UL33 140 aa20.3■□□□□ 0.84
SOX1-201ENST00000330949 A0A1W2PQM1 296 aa20.3■□□□□ 0.84
SOX1-201ENST00000330949 TBR1Q16650 682 aa20.3■□□□□ 0.84
SOX1-201ENST00000330949 AAED1Q7RTV5 226 aa20.3■□□□□ 0.84
SOX1-201ENST00000330949 MRPL21Q7Z2W9 205 aaKnown RBP20.3■□□□□ 0.84
SOX1-201ENST00000330949 ZNF488Q96MN9 340 aa20.3■□□□□ 0.84
SOX1-201ENST00000330949 CRIM1Q9NZV1 1036 aa20.3■□□□□ 0.84
SOX1-201ENST00000330949 C15orf62A8K5M9 175 aa20.29■□□□□ 0.84
SOX1-201ENST00000330949 RAB29O14966 203 aa20.29■□□□□ 0.84
SOX1-201ENST00000330949 APCSP02743 223 aa20.29■□□□□ 0.84
SOX1-201ENST00000330949 GCHFRP30047 84 aa20.29■□□□□ 0.84
SOX1-201ENST00000330949 DSCR4P56555 118 aaPredicted RBP20.29■□□□□ 0.84
SOX1-201ENST00000330949 CLEC2AQ6UVW9 174 aa20.29■□□□□ 0.84
SOX1-201ENST00000330949 ZNF645Q8N7E2 425 aa20.29■□□□□ 0.84
SOX1-201ENST00000330949 RARRES3Q9UL19 164 aa20.29■□□□□ 0.84
SOX1-201ENST00000330949 FAM181BA6NEQ2 426 aa20.29■□□□□ 0.84
SOX1-201ENST00000330949 HSBP1O75506 76 aa20.29■□□□□ 0.84
SOX1-201ENST00000330949 NTF4P34130 210 aa20.29■□□□□ 0.84
SOX1-201ENST00000330949 GNG4P50150 75 aa20.29■□□□□ 0.84
SOX1-201ENST00000330949 CATR1Q13166 79 aa20.29■□□□□ 0.84
SOX1-201ENST00000330949 MPV17L2Q567V2 206 aa20.29■□□□□ 0.84
SOX1-201ENST00000330949 H2BFWTQ7Z2G1 175 aa20.29■□□□□ 0.84
SOX1-201ENST00000330949 CLDN14O95500 239 aa20.28■□□□□ 0.84
SOX1-201ENST00000330949 OSTCQ9NRP0 149 aa20.28■□□□□ 0.84
SOX1-201ENST00000330949 OCIAD1Q9NX40 245 aa20.28■□□□□ 0.84
SOX1-201ENST00000330949 CEP192Q8TEP8 1941 aa20.28■□□□□ 0.84
SOX1-201ENST00000330949 TNRC6AQ8NDV7 1962 aaKnown RBP20.28■□□□□ 0.84
SOX1-201ENST00000330949 CDIPTO14735 213 aa20.28■□□□□ 0.84
SOX1-201ENST00000330949 DNPH1O43598 174 aa20.28■□□□□ 0.84
SOX1-201ENST00000330949 UBE2G1P62253 170 aa20.28■□□□□ 0.84
SOX1-201ENST00000330949 ERASQ7Z444 233 aa20.28■□□□□ 0.84
SOX1-201ENST00000330949 OR8B3Q8NGG8 313 aa20.28■□□□□ 0.84
SOX1-201ENST00000330949 C18orf32Q8TCD1 76 aa20.28■□□□□ 0.84
SOX1-201ENST00000330949 OR8B2Q96RD0 313 aa20.28■□□□□ 0.84
SOX1-201ENST00000330949 TNRC6BQ9UPQ9 1833 aaKnown RBP20.27■□□□□ 0.84
SOX1-201ENST00000330949 RELBQ01201 579 aa20.27■□□□□ 0.84
SOX1-201ENST00000330949 GJE1A6NN92 205 aa20.27■□□□□ 0.84
SOX1-201ENST00000330949 SLC35B1P78383 322 aa20.27■□□□□ 0.84
SOX1-201ENST00000330949 SPINK9Q5DT21 86 aa20.27■□□□□ 0.84
SOX1-201ENST00000330949 DEFB125Q8N687 156 aa20.27■□□□□ 0.84
SOX1-201ENST00000330949 UBALD1Q8TB05 177 aa20.27■□□□□ 0.84
SOX1-201ENST00000330949 USF3Q68DE3 2245 aa20.27■□□□□ 0.84
SOX1-201ENST00000330949 ZIC3O60481 467 aa20.26■□□□□ 0.83
SOX1-201ENST00000330949 RAC3P60763 192 aa20.26■□□□□ 0.83
SOX1-201ENST00000330949 DEPPQ9NTK1 212 aa20.26■□□□□ 0.83
SOX1-201ENST00000330949 RPH3ALQ9UNE2 315 aa20.26■□□□□ 0.83
SOX1-201ENST00000330949 WASHC3Q9Y3C0 194 aa20.26■□□□□ 0.83
SOX1-201ENST00000330949 ESPL1Q14674 2120 aa20.26■□□□□ 0.83
SOX1-201ENST00000330949 LIFP15018 202 aa20.26■□□□□ 0.83
SOX1-201ENST00000330949 CENPWQ5EE01 88 aa20.26■□□□□ 0.83
SOX1-201ENST00000330949 MRPL54Q6P161 138 aaKnown RBP20.26■□□□□ 0.83
SOX1-201ENST00000330949 J3QR06 171 aa20.26■□□□□ 0.83
SOX1-201ENST00000330949 M0R2Z0 102 aa20.26■□□□□ 0.83
SOX1-201ENST00000330949 SPATA46Q5T0L3 261 aa20.26■□□□□ 0.83
SOX1-201ENST00000330949 TREML4Q6UXN2 200 aa20.26■□□□□ 0.83
SOX1-201ENST00000330949 ZNF497Q6ZNH5 498 aa20.26■□□□□ 0.83
SOX1-201ENST00000330949 PHF7Q9BWX1 381 aaPredicted RBP20.26■□□□□ 0.83
SOX1-201ENST00000330949 OR2T8A6NH00 312 aa20.25■□□□□ 0.83
SOX1-201ENST00000330949 AREGP15514 252 aa20.25■□□□□ 0.83
SOX1-201ENST00000330949 CCNOP22674 350 aa20.25■□□□□ 0.83
SOX1-201ENST00000330949 EBLN2Q6P2I7 272 aa20.25■□□□□ 0.83
SOX1-201ENST00000330949 ST20Q9HBF5 79 aa20.25■□□□□ 0.83
SOX1-201ENST00000330949 KMT2EQ8IZD2 1858 aa20.25■□□□□ 0.83
SOX1-201ENST00000330949 GAGE12BA1L429 117 aa20.25■□□□□ 0.83
SOX1-201ENST00000330949 HELTA6NFD8 242 aa20.25■□□□□ 0.83
SOX1-201ENST00000330949 MIC13Q5XKP0 118 aa20.25■□□□□ 0.83
SOX1-201ENST00000330949 AMMECR1LQ6DCA0 310 aa20.25■□□□□ 0.83
SOX1-201ENST00000330949 GGTLC1Q9BX51 225 aa20.25■□□□□ 0.83
SOX1-201ENST00000330949 IGHV5-10-1A0A0J9YXX1 117 aa20.24■□□□□ 0.83
SOX1-201ENST00000330949 NEURL1O76050 574 aa20.24■□□□□ 0.83
SOX1-201ENST00000330949 RAC2P15153 192 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms