RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 WISP1O95388 367 aa9.96□□□□□ -0.81
SHMT2-201ENST00000328923 HTR1DP28221 377 aa9.96□□□□□ -0.81
SHMT2-201ENST00000328923 SLC35B1P78383 322 aa9.96□□□□□ -0.81
SHMT2-201ENST00000328923 NMSQ5H8A3 153 aa9.96□□□□□ -0.81
SHMT2-201ENST00000328923 TMEM164Q5U3C3 297 aa9.96□□□□□ -0.81
SHMT2-201ENST00000328923 CRIP3Q6Q6R5 217 aa9.96□□□□□ -0.81
SHMT2-201ENST00000328923 OR5A1Q8NGJ0 315 aa9.96□□□□□ -0.81
SHMT2-201ENST00000328923 OCC1Q8TAD7 63 aa9.96□□□□□ -0.81
SHMT2-201ENST00000328923 OR4C12Q96R67 309 aa9.96□□□□□ -0.81
SHMT2-201ENST00000328923 SCRT2Q9NQ03 307 aa9.96□□□□□ -0.81
SHMT2-201ENST00000328923 MRPL16Q9NX20 251 aaKnown RBP9.96□□□□□ -0.81
SHMT2-201ENST00000328923 ZNF835Q9Y2P0 537 aa9.96□□□□□ -0.81
SHMT2-201ENST00000328923 ZDBF2Q9HCK1 2354 aa9.96□□□□□ -0.81
SHMT2-201ENST00000328923 TRAV9-1A0A075B6T8 112 aa9.96□□□□□ -0.82
SHMT2-201ENST00000328923 KIR2DS5A0A0G2JLQ3 304 aa9.96□□□□□ -0.82
SHMT2-201ENST00000328923 A0A0G2JNG1 304 aa9.96□□□□□ -0.82
SHMT2-201ENST00000328923 CTXND1A0A1B0GTU2 59 aa9.96□□□□□ -0.82
SHMT2-201ENST00000328923 KIR2DS3K7RE56 304 aa9.96□□□□□ -0.82
SHMT2-201ENST00000328923 SNAI2O43623 268 aa9.96□□□□□ -0.82
SHMT2-201ENST00000328923 RHBDL1O75783 438 aa9.96□□□□□ -0.82
SHMT2-201ENST00000328923 IAPPP10997 89 aa9.96□□□□□ -0.82
SHMT2-201ENST00000328923 CRYBB3P26998 211 aa9.96□□□□□ -0.82
SHMT2-201ENST00000328923 CYB561P49447 251 aa9.96□□□□□ -0.82
SHMT2-201ENST00000328923 PPP1CAP62136 330 aa9.96□□□□□ -0.82
SHMT2-201ENST00000328923 ATP5G2Q06055 141 aa9.96□□□□□ -0.82
SHMT2-201ENST00000328923 KIR2DS5Q14953 304 aa9.96□□□□□ -0.82
SHMT2-201ENST00000328923 ZNF542PQ5EBM4 170 aa9.96□□□□□ -0.82
SHMT2-201ENST00000328923 MRPL54Q6P161 138 aaKnown RBP9.96□□□□□ -0.82
SHMT2-201ENST00000328923 TMEM136Q6ZRR5 245 aa9.96□□□□□ -0.82
SHMT2-201ENST00000328923 MTURNQ8N3F0 131 aa9.96□□□□□ -0.82
SHMT2-201ENST00000328923 HES4Q9HCC6 221 aa9.96□□□□□ -0.82
SHMT2-201ENST00000328923 PTRH2Q9Y3E5 179 aaKnown RBP9.96□□□□□ -0.82
SHMT2-201ENST00000328923 TRBV9A0A0B4J1U6 114 aa9.95□□□□□ -0.82
SHMT2-201ENST00000328923 SPTY2D1-AS1A0A0U1RR47 76 aa9.95□□□□□ -0.82
SHMT2-201ENST00000328923 TMEM189A5PLL7 270 aa9.95□□□□□ -0.82
SHMT2-201ENST00000328923 H3BRM9 83 aa9.95□□□□□ -0.82
SHMT2-201ENST00000328923 DEGS1O15121 323 aa9.95□□□□□ -0.82
SHMT2-201ENST00000328923 CELA2BP08218 269 aaPredicted RBP9.95□□□□□ -0.82
SHMT2-201ENST00000328923 PTGDSP41222 190 aa9.95□□□□□ -0.82
SHMT2-201ENST00000328923 ZNF121P58317 390 aaPredicted RBP9.95□□□□□ -0.82
SHMT2-201ENST00000328923 PRR31Q5SQ13 230 aa9.95□□□□□ -0.82
SHMT2-201ENST00000328923 TBC1D26Q86UD7 250 aa9.95□□□□□ -0.82
SHMT2-201ENST00000328923 MED12LQ86YW9 2145 aa9.95□□□□□ -0.82
SHMT2-201ENST00000328923 SFTPA2Q8IWL1 248 aa9.95□□□□□ -0.82
SHMT2-201ENST00000328923 MMD2Q8IY49 270 aa9.95□□□□□ -0.82
SHMT2-201ENST00000328923 VSTM2AQ8TAG5 236 aa9.95□□□□□ -0.82
SHMT2-201ENST00000328923 TAF15Q92804 592 aaKnown RBP eCLIP9.95□□□□□ -0.82
SHMT2-201ENST00000328923 RAB37Q96AX2 223 aa9.95□□□□□ -0.82
SHMT2-201ENST00000328923 HILPDAQ9Y5L2 63 aa9.95□□□□□ -0.82
SHMT2-201ENST00000328923 ZNF716A6NP11 495 aa9.95□□□□□ -0.82
SHMT2-201ENST00000328923 HSBP1O75506 76 aa9.95□□□□□ -0.82
SHMT2-201ENST00000328923 IGLV3-1P01715 115 aa9.95□□□□□ -0.82
SHMT2-201ENST00000328923 APOA2P02652 100 aa9.95□□□□□ -0.82
SHMT2-201ENST00000328923 PF4V1P10720 104 aa9.95□□□□□ -0.82
SHMT2-201ENST00000328923 SEC11AP67812 179 aa9.95□□□□□ -0.82
SHMT2-201ENST00000328923 IZUMO4Q1ZYL8 232 aa9.95□□□□□ -0.82
SHMT2-201ENST00000328923 OR5D13Q8NGL4 314 aa9.95□□□□□ -0.82
SHMT2-201ENST00000328923 CITED1Q99966 193 aa9.95□□□□□ -0.82
SHMT2-201ENST00000328923 CLCF1Q9UBD9 225 aa9.95□□□□□ -0.82
SHMT2-201ENST00000328923 ADAMTS9Q9P2N4 1935 aa9.95□□□□□ -0.82
SHMT2-201ENST00000328923 C19orf67A6NJJ6 358 aa9.94□□□□□ -0.82
SHMT2-201ENST00000328923 SHISA8B8ZZ34 492 aa9.94□□□□□ -0.82
SHMT2-201ENST00000328923 H0YIG0 161 aa9.94□□□□□ -0.82
SHMT2-201ENST00000328923 HLA-DRB1P01911 266 aa9.94□□□□□ -0.82
SHMT2-201ENST00000328923 HIST1H1EP10412 219 aaKnown RBP9.94□□□□□ -0.82
SHMT2-201ENST00000328923 IL11P20809 199 aa9.94□□□□□ -0.82
SHMT2-201ENST00000328923 RPEL1Q2QD12 228 aa9.94□□□□□ -0.82
SHMT2-201ENST00000328923 ADAMTSL5Q6ZMM2 481 aa9.94□□□□□ -0.82
SHMT2-201ENST00000328923 C2orf91Q6ZV80 131 aa9.94□□□□□ -0.82
SHMT2-201ENST00000328923 OR10G9Q8NGN4 311 aa9.94□□□□□ -0.82
SHMT2-201ENST00000328923 OR10G7Q8NGN6 311 aa9.94□□□□□ -0.82
SHMT2-201ENST00000328923 PP6455Q8WZ26 134 aa9.94□□□□□ -0.82
SHMT2-201ENST00000328923 ST8SIA1Q92185 356 aa9.94□□□□□ -0.82
SHMT2-201ENST00000328923 SPSB4Q96A44 273 aa9.94□□□□□ -0.82
SHMT2-201ENST00000328923 Q96M66 194 aa9.94□□□□□ -0.82
SHMT2-201ENST00000328923 A0A0G2JRQ6 117 aa9.94□□□□□ -0.82
SHMT2-201ENST00000328923 A0A1W2PPC4 97 aa9.94□□□□□ -0.82
SHMT2-201ENST00000328923 K7EN84 100 aa9.94□□□□□ -0.82
SHMT2-201ENST00000328923 TNFRSF13BO14836 293 aaPredicted RBP9.94□□□□□ -0.82
SHMT2-201ENST00000328923 OR1D4P47884 311 aa9.94□□□□□ -0.82
SHMT2-201ENST00000328923 HERV-K104P61576 105 aa9.94□□□□□ -0.82
SHMT2-201ENST00000328923 GRB2P62993 217 aaKnown RBP9.94□□□□□ -0.82
SHMT2-201ENST00000328923 TMEM97Q5BJF2 176 aa9.94□□□□□ -0.82
SHMT2-201ENST00000328923 SLC37A2Q8TED4 501 aa9.94□□□□□ -0.82
SHMT2-201ENST00000328923 MMABQ96EY8 250 aaPredicted RBP9.94□□□□□ -0.82
SHMT2-201ENST00000328923 A0A1W2PPM0 123 aa9.93□□□□□ -0.82
SHMT2-201ENST00000328923 C17orf51A8MQB3 221 aa9.93□□□□□ -0.82
SHMT2-201ENST00000328923 ISLRO14498 428 aa9.93□□□□□ -0.82
SHMT2-201ENST00000328923 RPL32P62910 135 aaKnown RBP9.93□□□□□ -0.82
SHMT2-201ENST00000328923 Q6ZSR3 168 aa9.93□□□□□ -0.82
SHMT2-201ENST00000328923 C18orf32Q8TCD1 76 aa9.93□□□□□ -0.82
SHMT2-201ENST00000328923 LMX1AQ8TE12 382 aa9.93□□□□□ -0.82
SHMT2-201ENST00000328923 C10orf35Q96D05 121 aa9.93□□□□□ -0.82
SHMT2-201ENST00000328923 MBD6Q96DN6 1003 aa9.93□□□□□ -0.82
SHMT2-201ENST00000328923 TMEM70Q9BUB7 260 aa9.93□□□□□ -0.82
SHMT2-201ENST00000328923 STRADBQ9C0K7 418 aa9.93□□□□□ -0.82
SHMT2-201ENST00000328923 METTL7AQ9H8H3 244 aa9.93□□□□□ -0.82
SHMT2-201ENST00000328923 FGF21Q9NSA1 209 aa9.93□□□□□ -0.82
SHMT2-201ENST00000328923 MED29Q9NX70 200 aa9.93□□□□□ -0.82
SHMT2-201ENST00000328923 B5MCH6 92 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms