RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 SPAG8Q99932 426 aaPredicted RBP11.68□□□□□ -0.54
CLCN6-201ENST00000312413 ECM29Q5VYK3 1845 aa11.68□□□□□ -0.54
CLCN6-201ENST00000312413 NDUFA2O43678 99 aa11.68□□□□□ -0.54
CLCN6-201ENST00000312413 IGHV4-34P06331 123 aa11.68□□□□□ -0.54
CLCN6-201ENST00000312413 OPN3Q9H1Y3 402 aaPredicted RBP11.68□□□□□ -0.54
CLCN6-201ENST00000312413 TRAV9-1A0A075B6T8 112 aa11.67□□□□□ -0.54
CLCN6-201ENST00000312413 IGKV3D-11A0A0A0MRZ8 115 aa11.67□□□□□ -0.54
CLCN6-201ENST00000312413 A0A1W2PQF6 199 aa11.67□□□□□ -0.54
CLCN6-201ENST00000312413 APOHP02749 345 aaPredicted RBP11.67□□□□□ -0.54
CLCN6-201ENST00000312413 IGKV3-11P04433 115 aa11.67□□□□□ -0.54
CLCN6-201ENST00000312413 TSPAN7P41732 249 aa11.67□□□□□ -0.54
CLCN6-201ENST00000312413 ZNF56Q15929 161 aa11.67□□□□□ -0.54
CLCN6-201ENST00000312413 DNM1P46Q6ZS02 220 aa11.67□□□□□ -0.54
CLCN6-201ENST00000312413 TCF23Q7RTU1 214 aa11.67□□□□□ -0.54
CLCN6-201ENST00000312413 CLDN16Q9Y5I7 305 aa11.67□□□□□ -0.54
CLCN6-201ENST00000312413 LOC390937A0A1W2PQ73 354 aa11.67□□□□□ -0.54
CLCN6-201ENST00000312413 ATP5LO75964 103 aa11.67□□□□□ -0.54
CLCN6-201ENST00000312413 REG1AP05451 166 aa11.67□□□□□ -0.54
CLCN6-201ENST00000312413 TBR1Q16650 682 aa11.67□□□□□ -0.54
CLCN6-201ENST00000312413 C1orf185Q5T7R7 199 aa11.67□□□□□ -0.54
CLCN6-201ENST00000312413 FAM74A4Q5TZK3 123 aa11.67□□□□□ -0.54
CLCN6-201ENST00000312413 LINC00305Q7Z4B0 112 aa11.67□□□□□ -0.54
CLCN6-201ENST00000312413 SDF2L1Q9HCN8 221 aa11.67□□□□□ -0.54
CLCN6-201ENST00000312413 LAMTOR2Q9Y2Q5 125 aa11.67□□□□□ -0.54
CLCN6-201ENST00000312413 RNF222A6NCQ9 220 aa11.67□□□□□ -0.54
CLCN6-201ENST00000312413 KLF4O43474 513 aa11.67□□□□□ -0.54
CLCN6-201ENST00000312413 HOXB1P14653 301 aaPredicted RBP11.67□□□□□ -0.54
CLCN6-201ENST00000312413 TMEM171Q8WVE6 324 aa11.67□□□□□ -0.54
CLCN6-201ENST00000312413 DERL1Q9BUN8 251 aa11.67□□□□□ -0.54
CLCN6-201ENST00000312413 DUSP15Q9H1R2 295 aaPredicted RBP11.67□□□□□ -0.54
CLCN6-201ENST00000312413 IGHV1-45A0A0A0MS14 117 aa11.66□□□□□ -0.54
CLCN6-201ENST00000312413 CELA2AP08217 269 aa11.66□□□□□ -0.54
CLCN6-201ENST00000312413 TMEM186Q96B77 213 aa11.66□□□□□ -0.54
CLCN6-201ENST00000312413 FAM186AA6NE01 2351 aa11.66□□□□□ -0.54
CLCN6-201ENST00000312413 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.66□□□□□ -0.54
CLCN6-201ENST00000312413 C10orf128Q5T292 105 aa11.66□□□□□ -0.54
CLCN6-201ENST00000312413 OR9G1Q8NH87 305 aa11.66□□□□□ -0.54
CLCN6-201ENST00000312413 LEAP2Q969E1 77 aa11.66□□□□□ -0.54
CLCN6-201ENST00000312413 IGHMP01871 453 aa11.66□□□□□ -0.54
CLCN6-201ENST00000312413 VCX2Q9H322 139 aa11.66□□□□□ -0.54
CLCN6-201ENST00000312413 CA1P00915 261 aaPredicted RBP11.66□□□□□ -0.54
CLCN6-201ENST00000312413 PCSK4Q6UW60 755 aa11.66□□□□□ -0.54
CLCN6-201ENST00000312413 IFNL4K9M1U5 179 aa11.66□□□□□ -0.54
CLCN6-201ENST00000312413 CGAP01215 116 aa11.66□□□□□ -0.54
CLCN6-201ENST00000312413 TSPOP30536 169 aa11.66□□□□□ -0.54
CLCN6-201ENST00000312413 SAMD13Q5VXD3 122 aa11.66□□□□□ -0.54
CLCN6-201ENST00000312413 LRTM2Q8N967 370 aa11.66□□□□□ -0.54
CLCN6-201ENST00000312413 OR13C6PQ8NH95 151 aa11.66□□□□□ -0.54
CLCN6-201ENST00000312413 CLDND2Q8NHS1 167 aa11.66□□□□□ -0.54
CLCN6-201ENST00000312413 WBP1LQ9NX94 342 aa11.66□□□□□ -0.54
CLCN6-201ENST00000312413 BCORQ6W2J9 1755 aa11.65□□□□□ -0.54
CLCN6-201ENST00000312413 A0A1B0GUT8 65 aa11.65□□□□□ -0.54
CLCN6-201ENST00000312413 PRR33A8MZF0 331 aa11.65□□□□□ -0.54
CLCN6-201ENST00000312413 FHL5Q5TD97 284 aa11.65□□□□□ -0.54
CLCN6-201ENST00000312413 ZNF324BQ6AW86 544 aaPredicted RBP11.65□□□□□ -0.54
CLCN6-201ENST00000312413 IGHV3OR16-12A0A075B7B8 117 aa11.65□□□□□ -0.54
CLCN6-201ENST00000312413 NPIPB13A6NJU9 1138 aa11.65□□□□□ -0.54
CLCN6-201ENST00000312413 NPIPB4C9JG80 1138 aa11.65□□□□□ -0.54
CLCN6-201ENST00000312413 MOSP00540 346 aa11.65□□□□□ -0.54
CLCN6-201ENST00000312413 IGHV3-48P01763 117 aa11.65□□□□□ -0.54
CLCN6-201ENST00000312413 NBEAP1P0C6P0 100 aa11.65□□□□□ -0.54
CLCN6-201ENST00000312413 SUMO2P61956 95 aaKnown RBP11.65□□□□□ -0.54
CLCN6-201ENST00000312413 NUDT10Q8NFP7 164 aa11.65□□□□□ -0.54
CLCN6-201ENST00000312413 KLF14Q8TD94 323 aaPredicted RBP11.65□□□□□ -0.54
CLCN6-201ENST00000312413 NUDT11Q96G61 164 aa11.65□□□□□ -0.54
CLCN6-201ENST00000312413 AICDAQ9GZX7 198 aa11.65□□□□□ -0.54
CLCN6-201ENST00000312413 A0A0G2JK05 382 aa11.65□□□□□ -0.54
CLCN6-201ENST00000312413 FOXI3A8MTJ6 420 aaPredicted RBP11.65□□□□□ -0.54
CLCN6-201ENST00000312413 ICAM4Q14773 271 aa11.65□□□□□ -0.54
CLCN6-201ENST00000312413 FAM106AQ4KMX7 169 aa11.65□□□□□ -0.54
CLCN6-201ENST00000312413 RAX2Q96IS3 184 aa11.65□□□□□ -0.54
CLCN6-201ENST00000312413 SCO2A0A1W2PP80 73 aa11.65□□□□□ -0.55
CLCN6-201ENST00000312413 RAMP1O60894 148 aa11.65□□□□□ -0.55
CLCN6-201ENST00000312413 PRR7Q8TB68 274 aa11.65□□□□□ -0.55
CLCN6-201ENST00000312413 CTHRC1Q96CG8 243 aa11.65□□□□□ -0.55
CLCN6-201ENST00000312413 NPPCP23582 126 aa11.64□□□□□ -0.55
CLCN6-201ENST00000312413 UCP1P25874 307 aa11.64□□□□□ -0.55
CLCN6-201ENST00000312413 FAM19A2Q8N3H0 131 aa11.64□□□□□ -0.55
CLCN6-201ENST00000312413 C5orf30Q96GV9 206 aa11.64□□□□□ -0.55
CLCN6-201ENST00000312413 AHRRA9YTQ3 701 aa11.64□□□□□ -0.55
CLCN6-201ENST00000312413 CRYBA2P53672 197 aa11.64□□□□□ -0.55
CLCN6-201ENST00000312413 FAM159AQ6UWV7 190 aa11.64□□□□□ -0.55
CLCN6-201ENST00000312413 C1orf53Q5VUE5 145 aa11.64□□□□□ -0.55
CLCN6-201ENST00000312413 PMS2CLQ68D20 193 aa11.64□□□□□ -0.55
CLCN6-201ENST00000312413 C19orf48Q6RUI8 117 aa11.64□□□□□ -0.55
CLCN6-201ENST00000312413 TRAV24A0A0B4J272 114 aa11.64□□□□□ -0.55
CLCN6-201ENST00000312413 C4orf51C9J302 202 aa11.64□□□□□ -0.55
CLCN6-201ENST00000312413 PEX7O00628 323 aa11.64□□□□□ -0.55
CLCN6-201ENST00000312413 CDK5RAP2Q96SN8 1893 aa11.64□□□□□ -0.55
CLCN6-201ENST00000312413 STRCP1A6NGW2 1772 aa11.63□□□□□ -0.55
CLCN6-201ENST00000312413 TRAV14DV4A0A0A6YYC5 116 aa11.63□□□□□ -0.55
CLCN6-201ENST00000312413 GPR183P32249 361 aa11.63□□□□□ -0.55
CLCN6-201ENST00000312413 FOXC2Q99958 501 aa11.63□□□□□ -0.55
CLCN6-201ENST00000312413 DOCK2Q92608 1830 aa11.63□□□□□ -0.55
CLCN6-201ENST00000312413 NPIPB11E5RHQ5 1161 aa11.63□□□□□ -0.55
CLCN6-201ENST00000312413 TYMSP04818 313 aa11.63□□□□□ -0.55
CLCN6-201ENST00000312413 ATP5G3P48201 142 aa11.63□□□□□ -0.55
CLCN6-201ENST00000312413 PEAR1Q5VY43 1037 aaPredicted RBP11.63□□□□□ -0.55
CLCN6-201ENST00000312413 NRN1Q9NPD7 142 aa11.63□□□□□ -0.55
CLCN6-201ENST00000312413 CKAP5Q14008 2032 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms