RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 CLN8Q9UBY8 286 aa9.21□□□□□ -0.94
LSM3-201ENST00000306024 PXMP4Q9Y6I8 212 aa9.21□□□□□ -0.94
LSM3-201ENST00000306024 TUSC2O75896 110 aa9.2□□□□□ -0.94
LSM3-201ENST00000306024 TBC1D28Q2M2D7 210 aa9.2□□□□□ -0.94
LSM3-201ENST00000306024 SPSB1Q96BD6 273 aa9.2□□□□□ -0.94
LSM3-201ENST00000306024 HIPK2Q9H2X6 1198 aa9.2□□□□□ -0.94
LSM3-201ENST00000306024 CST9LQ9H4G1 147 aa9.2□□□□□ -0.94
LSM3-201ENST00000306024 PKDREJQ9NTG1 2253 aa9.2□□□□□ -0.94
LSM3-201ENST00000306024 A0A1W2PN81 502 aa9.2□□□□□ -0.94
LSM3-201ENST00000306024 TMEM238C9JI98 176 aa9.2□□□□□ -0.94
LSM3-201ENST00000306024 TMEM50AO95807 157 aa9.2□□□□□ -0.94
LSM3-201ENST00000306024 PSG1P11464 419 aa9.2□□□□□ -0.94
LSM3-201ENST00000306024 SNAI3Q3KNW1 292 aa9.2□□□□□ -0.94
LSM3-201ENST00000306024 C10orf128Q5T292 105 aa9.2□□□□□ -0.94
LSM3-201ENST00000306024 VWA1Q6PCB0 445 aa9.2□□□□□ -0.94
LSM3-201ENST00000306024 LYPD6Q86Y78 171 aa9.2□□□□□ -0.94
LSM3-201ENST00000306024 RND1Q92730 232 aa9.2□□□□□ -0.94
LSM3-201ENST00000306024 TMEM45BQ96B21 275 aa9.2□□□□□ -0.94
LSM3-201ENST00000306024 GPR146Q96CH1 333 aa9.2□□□□□ -0.94
LSM3-201ENST00000306024 SFRP2Q96HF1 295 aa9.2□□□□□ -0.94
LSM3-201ENST00000306024 TM2D1Q9BX74 207 aa9.2□□□□□ -0.94
LSM3-201ENST00000306024 MYO15AQ9UKN7 3530 aa9.2□□□□□ -0.94
LSM3-201ENST00000306024 HYPMO75409 117 aa9.2□□□□□ -0.94
LSM3-201ENST00000306024 SELENOVP59797 346 aa9.2□□□□□ -0.94
LSM3-201ENST00000306024 ST6GALNAC6Q969X2 333 aa9.2□□□□□ -0.94
LSM3-201ENST00000306024 ZNF331Q9NQX6 463 aaPredicted RBP9.2□□□□□ -0.94
LSM3-201ENST00000306024 HEATR1Q9H583 2144 aaKnown RBP9.2□□□□□ -0.94
LSM3-201ENST00000306024 EDDM3BP56851 147 aa9.19□□□□□ -0.94
LSM3-201ENST00000306024 ID3Q02535 119 aa9.19□□□□□ -0.94
LSM3-201ENST00000306024 ZNF818PQ6ZRF7 136 aa9.19□□□□□ -0.94
LSM3-201ENST00000306024 FAM19A2Q8N3H0 131 aa9.19□□□□□ -0.94
LSM3-201ENST00000306024 PDE6DO43924 150 aa9.19□□□□□ -0.94
LSM3-201ENST00000306024 PSG2P11465 335 aa9.19□□□□□ -0.94
LSM3-201ENST00000306024 RPEL1Q2QD12 228 aa9.19□□□□□ -0.94
LSM3-201ENST00000306024 PRR30Q53SZ7 412 aaPredicted RBP9.19□□□□□ -0.94
LSM3-201ENST00000306024 MRPL54Q6P161 138 aaKnown RBP9.19□□□□□ -0.94
LSM3-201ENST00000306024 FAM57AQ8TBR7 257 aa9.19□□□□□ -0.94
LSM3-201ENST00000306024 OR2H1Q9GZK4 316 aa9.19□□□□□ -0.94
LSM3-201ENST00000306024 TRAV30A0A087WSZ9 112 aa9.19□□□□□ -0.94
LSM3-201ENST00000306024 CCL21O00585 134 aa9.19□□□□□ -0.94
LSM3-201ENST00000306024 SH2D1BO14796 132 aa9.19□□□□□ -0.94
LSM3-201ENST00000306024 RNASEKQ6P5S7 137 aaKnown RBP9.19□□□□□ -0.94
LSM3-201ENST00000306024 ZNF525Q8N782 197 aa9.19□□□□□ -0.94
LSM3-201ENST00000306024 PRDM14Q9GZV8 571 aa9.19□□□□□ -0.94
LSM3-201ENST00000306024 GP6Q9HCN6 339 aa9.19□□□□□ -0.94
LSM3-201ENST00000306024 AKAP6Q13023 2319 aa9.19□□□□□ -0.94
LSM3-201ENST00000306024 IGKV3D-15A0A087WSY6 115 aa9.18□□□□□ -0.94
LSM3-201ENST00000306024 FAM90A27PA6NNH2 459 aa9.18□□□□□ -0.94
LSM3-201ENST00000306024 M0R2Z0 102 aa9.18□□□□□ -0.94
LSM3-201ENST00000306024 SLC17A3O00476 420 aa9.18□□□□□ -0.94
LSM3-201ENST00000306024 IGLC2P0DOY2 106 aa9.18□□□□□ -0.94
LSM3-201ENST00000306024 IGLC3P0DOY3 106 aa9.18□□□□□ -0.94
LSM3-201ENST00000306024 PSG4Q00888 419 aa9.18□□□□□ -0.94
LSM3-201ENST00000306024 HIST3H3Q16695 136 aa9.18□□□□□ -0.94
LSM3-201ENST00000306024 LHFPL2Q6ZUX7 228 aa9.18□□□□□ -0.94
LSM3-201ENST00000306024 WFDC8Q8IUA0 241 aa9.18□□□□□ -0.94
LSM3-201ENST00000306024 OR8I2Q8N0Y5 310 aa9.18□□□□□ -0.94
LSM3-201ENST00000306024 PRR7Q8TB68 274 aa9.18□□□□□ -0.94
LSM3-201ENST00000306024 AGMATQ9BSE5 352 aa9.18□□□□□ -0.94
LSM3-201ENST00000306024 DKK4Q9UBT3 224 aa9.18□□□□□ -0.94
LSM3-201ENST00000306024 FBXL7Q9UJT9 491 aa9.18□□□□□ -0.94
LSM3-201ENST00000306024 TNRC6AQ8NDV7 1962 aaKnown RBP9.18□□□□□ -0.94
LSM3-201ENST00000306024 VSTM5A8MXK1 200 aa9.18□□□□□ -0.94
LSM3-201ENST00000306024 TYMSP04818 313 aa9.18□□□□□ -0.94
LSM3-201ENST00000306024 CTXN2P0C2S0 81 aa9.18□□□□□ -0.94
LSM3-201ENST00000306024 TSPOP30536 169 aa9.18□□□□□ -0.94
LSM3-201ENST00000306024 FOXG1P55316 489 aaPredicted RBP9.18□□□□□ -0.94
LSM3-201ENST00000306024 ZNF726P1Q15940 193 aa9.18□□□□□ -0.94
LSM3-201ENST00000306024 PMCHL1Q16048 86 aa9.18□□□□□ -0.94
LSM3-201ENST00000306024 LRRC75BQ2VPJ9 315 aa9.18□□□□□ -0.94
LSM3-201ENST00000306024 TMEM211Q6ICI0 200 aa9.18□□□□□ -0.94
LSM3-201ENST00000306024 OR7C2O60412 319 aa9.18□□□□□ -0.94
LSM3-201ENST00000306024 WISP2O76076 250 aa9.18□□□□□ -0.94
LSM3-201ENST00000306024 NUDT3O95989 172 aa9.18□□□□□ -0.94
LSM3-201ENST00000306024 NAPSAO96009 420 aa9.18□□□□□ -0.94
LSM3-201ENST00000306024 SPATA46Q5T0L3 261 aa9.18□□□□□ -0.94
LSM3-201ENST00000306024 GTF2H5Q6ZYL4 71 aa9.18□□□□□ -0.94
LSM3-201ENST00000306024 RPP25LQ8N5L8 163 aaKnown RBP9.18□□□□□ -0.94
LSM3-201ENST00000306024 OR52L2PQ8NGH6 319 aa9.18□□□□□ -0.94
LSM3-201ENST00000306024 UBALD1Q8TB05 177 aa9.18□□□□□ -0.94
LSM3-201ENST00000306024 TMEM147Q9BVK8 224 aa9.18□□□□□ -0.94
LSM3-201ENST00000306024 LINC00470Q9BZP3 86 aa9.18□□□□□ -0.94
LSM3-201ENST00000306024 PLEKHA3Q9HB20 300 aa9.18□□□□□ -0.94
LSM3-201ENST00000306024 ZNF581Q9P0T4 197 aa9.18□□□□□ -0.94
LSM3-201ENST00000306024 SELENOKQ9Y6D0 94 aa9.18□□□□□ -0.94
LSM3-201ENST00000306024 PRR14LQ5THK1 2151 aa9.17□□□□□ -0.94
LSM3-201ENST00000306024 IGHV2OR16-5A0A0B4J2B6 119 aa9.17□□□□□ -0.94
LSM3-201ENST00000306024 PRSS47A8MTI9 375 aa9.17□□□□□ -0.94
LSM3-201ENST00000306024 M0R1B8 84 aa9.17□□□□□ -0.94
LSM3-201ENST00000306024 MT-CO2P00403 227 aa9.17□□□□□ -0.94
LSM3-201ENST00000306024 SCTP09683 121 aa9.17□□□□□ -0.94
LSM3-201ENST00000306024 SRIP30626 198 aa9.17□□□□□ -0.94
LSM3-201ENST00000306024 ZNF83P51522 516 aa9.17□□□□□ -0.94
LSM3-201ENST00000306024 RDH5Q92781 318 aa9.17□□□□□ -0.94
LSM3-201ENST00000306024 MTCH1Q9NZJ7 389 aa9.17□□□□□ -0.94
LSM3-201ENST00000306024 DUSP13Q9UII6 198 aa9.17□□□□□ -0.94
LSM3-201ENST00000306024 GAGE10A6NGK3 116 aa9.17□□□□□ -0.94
LSM3-201ENST00000306024 ANKRD30BLA7E2S9 258 aa9.17□□□□□ -0.94
LSM3-201ENST00000306024 AGFG2O95081 481 aa9.17□□□□□ -0.94
LSM3-201ENST00000306024 F2RP25116 425 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms