RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 SLC45A2Q9UMX9 530 aa4.48□□□□□ -1.69
VPS50-202ENST00000305866 C2orf70A6NJV1 201 aa4.47□□□□□ -1.69
VPS50-202ENST00000305866 LAMTOR5O43504 91 aa4.47□□□□□ -1.69
VPS50-202ENST00000305866 S1PR2O95136 353 aa4.47□□□□□ -1.69
VPS50-202ENST00000305866 MT-CO3P00414 261 aa4.47□□□□□ -1.69
VPS50-202ENST00000305866 GPX1P07203 203 aa4.47□□□□□ -1.69
VPS50-202ENST00000305866 EGR1P18146 543 aa4.47□□□□□ -1.69
VPS50-202ENST00000305866 IGFBP4P22692 258 aa4.47□□□□□ -1.69
VPS50-202ENST00000305866 MAGEA5P43359 124 aa4.47□□□□□ -1.69
VPS50-202ENST00000305866 ARSJQ5FYB0 599 aaPredicted RBP4.47□□□□□ -1.69
VPS50-202ENST00000305866 MDP1Q86V88 176 aa4.47□□□□□ -1.69
VPS50-202ENST00000305866 ST6GALNAC3Q8NDV1 305 aa4.47□□□□□ -1.69
VPS50-202ENST00000305866 TMEM190Q8WZ59 177 aa4.47□□□□□ -1.69
VPS50-202ENST00000305866 GGTLC1Q9BX51 225 aa4.47□□□□□ -1.69
VPS50-202ENST00000305866 ZNF442Q9H7R0 627 aa4.47□□□□□ -1.69
VPS50-202ENST00000305866 FKBP11Q9NYL4 201 aa4.47□□□□□ -1.69
VPS50-202ENST00000305866 ATMQ13315 3056 aa4.47□□□□□ -1.69
VPS50-202ENST00000305866 TRGV10A0A0A0MS01 117 aa4.47□□□□□ -1.69
VPS50-202ENST00000305866 UBE2L5PA0A1B0GUS4 154 aa4.47□□□□□ -1.69
VPS50-202ENST00000305866 CEBPZOSA8MTT3 80 aa4.47□□□□□ -1.69
VPS50-202ENST00000305866 SH2D1BO14796 132 aa4.47□□□□□ -1.69
VPS50-202ENST00000305866 PAGE4O60829 102 aa4.47□□□□□ -1.69
VPS50-202ENST00000305866 MPDU1O75352 247 aa4.47□□□□□ -1.69
VPS50-202ENST00000305866 SERF1AO75920 110 aa4.47□□□□□ -1.69
VPS50-202ENST00000305866 OR7C1O76099 320 aaPredicted RBP4.47□□□□□ -1.69
VPS50-202ENST00000305866 CCL2P13500 99 aa4.47□□□□□ -1.69
VPS50-202ENST00000305866 OR3A1P47881 315 aa4.47□□□□□ -1.69
VPS50-202ENST00000305866 MEOX1P50221 254 aa4.47□□□□□ -1.69
VPS50-202ENST00000305866 ZNF83P51522 516 aa4.47□□□□□ -1.69
VPS50-202ENST00000305866 ZNF134P52741 427 aa4.47□□□□□ -1.69
VPS50-202ENST00000305866 RPS18P62269 152 aaKnown RBP4.47□□□□□ -1.69
VPS50-202ENST00000305866 TBC1D28Q2M2D7 210 aa4.47□□□□□ -1.69
VPS50-202ENST00000305866 ACOT6Q3I5F7 207 aaPredicted RBP4.47□□□□□ -1.69
VPS50-202ENST00000305866 ALKBH6Q3KRA9 238 aa4.47□□□□□ -1.69
VPS50-202ENST00000305866 ACP7Q6ZNF0 438 aa4.47□□□□□ -1.69
VPS50-202ENST00000305866 SGMS2Q8NHU3 365 aa4.47□□□□□ -1.69
VPS50-202ENST00000305866 RNASE8Q8TDE3 154 aaKnown RBP4.47□□□□□ -1.69
VPS50-202ENST00000305866 WIPF2Q8TF74 440 aaPredicted RBP4.47□□□□□ -1.69
VPS50-202ENST00000305866 IGLV3-9A0A075B6K5 115 aa4.47□□□□□ -1.69
VPS50-202ENST00000305866 TRAV39A0A0B4J263 110 aa4.47□□□□□ -1.69
VPS50-202ENST00000305866 A0A1W2PS18 150 aa4.47□□□□□ -1.69
VPS50-202ENST00000305866 MBD3L4A6NDZ8 208 aaPredicted RBP4.47□□□□□ -1.69
VPS50-202ENST00000305866 MBD3L3A6NE82 208 aaPredicted RBP4.47□□□□□ -1.69
VPS50-202ENST00000305866 MBD3L5A6NJ08 208 aaPredicted RBP4.47□□□□□ -1.69
VPS50-202ENST00000305866 H0YJW9 148 aa4.47□□□□□ -1.69
VPS50-202ENST00000305866 GFRA3O60609 400 aa4.47□□□□□ -1.69
VPS50-202ENST00000305866 FOXH1O75593 365 aa4.47□□□□□ -1.69
VPS50-202ENST00000305866 IGLC2P0DOY2 106 aa4.47□□□□□ -1.69
VPS50-202ENST00000305866 IGLC3P0DOY3 106 aa4.47□□□□□ -1.69
VPS50-202ENST00000305866 S100GP29377 79 aa4.47□□□□□ -1.69
VPS50-202ENST00000305866 OPRK1P41145 380 aa4.47□□□□□ -1.69
VPS50-202ENST00000305866 TBR1Q16650 682 aa4.47□□□□□ -1.69
VPS50-202ENST00000305866 RNFT1Q5M7Z0 435 aa4.47□□□□□ -1.69
VPS50-202ENST00000305866 MRPL41Q8IXM3 137 aaKnown RBP4.47□□□□□ -1.69
VPS50-202ENST00000305866 NECAP1Q8NC96 275 aa4.47□□□□□ -1.69
VPS50-202ENST00000305866 ZNF439Q8NDP4 499 aa4.47□□□□□ -1.69
VPS50-202ENST00000305866 MBD3L2Q8NHZ7 208 aaPredicted RBP4.47□□□□□ -1.69
VPS50-202ENST00000305866 CIB3Q96Q77 187 aaPredicted RBP4.47□□□□□ -1.69
VPS50-202ENST00000305866 HSD17B10Q99714 261 aaKnown RBP4.47□□□□□ -1.69
VPS50-202ENST00000305866 OR2J1Q9GZK6 312 aa4.47□□□□□ -1.69
VPS50-202ENST00000305866 CXXC4Q9H2H0 198 aa4.47□□□□□ -1.69
VPS50-202ENST00000305866 SLC25A22Q9H936 323 aa4.47□□□□□ -1.69
VPS50-202ENST00000305866 CLN8Q9UBY8 286 aa4.47□□□□□ -1.69
VPS50-202ENST00000305866 A0A1B0GXF2 115 aa4.46□□□□□ -1.69
VPS50-202ENST00000305866 SCO2A0A1W2PP80 73 aa4.46□□□□□ -1.69
VPS50-202ENST00000305866 TMEM30CPA0ZSE6 113 aa4.46□□□□□ -1.69
VPS50-202ENST00000305866 C12orf77C9JDV5 145 aa4.46□□□□□ -1.69
VPS50-202ENST00000305866 TNFRSF13BO14836 293 aaPredicted RBP4.46□□□□□ -1.69
VPS50-202ENST00000305866 OR10J1P30954 320 aa4.46□□□□□ -1.69
VPS50-202ENST00000305866 PPP1CBP62140 327 aa4.46□□□□□ -1.69
VPS50-202ENST00000305866 HBG1P69891 147 aa4.46□□□□□ -1.69
VPS50-202ENST00000305866 HBG2P69892 147 aa4.46□□□□□ -1.69
VPS50-202ENST00000305866 RELBQ01201 579 aa4.46□□□□□ -1.69
VPS50-202ENST00000305866 SPATA31B1PQ5VZV4 182 aa4.46□□□□□ -1.69
VPS50-202ENST00000305866 STX12Q86Y82 276 aa4.46□□□□□ -1.69
VPS50-202ENST00000305866 TMEM147Q9BVK8 224 aa4.46□□□□□ -1.69
VPS50-202ENST00000305866 TECRQ9NZ01 308 aaKnown RBP4.46□□□□□ -1.69
VPS50-202ENST00000305866 METRNQ9UJH8 293 aa4.46□□□□□ -1.69
VPS50-202ENST00000305866 PPIAL4AQ9Y536 164 aa4.46□□□□□ -1.69
VPS50-202ENST00000305866 AKAP9Q99996 3911 aa4.46□□□□□ -1.7
VPS50-202ENST00000305866 CGB1A6NKQ9 187 aa4.46□□□□□ -1.7
VPS50-202ENST00000305866 M0R143 59 aa4.46□□□□□ -1.7
VPS50-202ENST00000305866 HYPMO75409 117 aa4.46□□□□□ -1.7
VPS50-202ENST00000305866 KIR2DS2P43631 304 aa4.46□□□□□ -1.7
VPS50-202ENST00000305866 PAX8Q06710 450 aa4.46□□□□□ -1.7
VPS50-202ENST00000305866 FOXF2Q12947 444 aa4.46□□□□□ -1.7
VPS50-202ENST00000305866 KLF5Q13887 457 aaPredicted RBP4.46□□□□□ -1.7
VPS50-202ENST00000305866 IQCJQ1A5X6 159 aa4.46□□□□□ -1.7
VPS50-202ENST00000305866 MSMPQ1L6U9 139 aa4.46□□□□□ -1.7
VPS50-202ENST00000305866 ABHD17BQ5VST6 288 aa4.46□□□□□ -1.7
VPS50-202ENST00000305866 RUSC1-AS1Q66K80 236 aa4.46□□□□□ -1.7
VPS50-202ENST00000305866 WDR82Q6UXN9 313 aa4.46□□□□□ -1.7
VPS50-202ENST00000305866 OR10G7Q8NGN6 311 aa4.46□□□□□ -1.7
VPS50-202ENST00000305866 S100PBPQ96BU1 408 aa4.46□□□□□ -1.7
VPS50-202ENST00000305866 NEIL1Q96FI4 390 aaPredicted RBP4.46□□□□□ -1.7
VPS50-202ENST00000305866 FAM167A-AS1Q96KT0 104 aa4.46□□□□□ -1.7
VPS50-202ENST00000305866 TAAR6Q96RI8 345 aa4.46□□□□□ -1.7
VPS50-202ENST00000305866 GNB4Q9HAV0 340 aa4.46□□□□□ -1.7
VPS50-202ENST00000305866 IL36BQ9NZH7 164 aa4.46□□□□□ -1.7
VPS50-202ENST00000305866 C1RLQ9NZP8 487 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms