RNA–Protein interactions for RNA: ENST00000293780.4

CHRNE-201, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNE, Length 2,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-201ENST00000293780 MSMPQ1L6U9 139 aa13.95□□□□□ -0.18
CHRNE-201ENST00000293780 MIC13Q5XKP0 118 aa13.95□□□□□ -0.18
CHRNE-201ENST00000293780 LRP11Q86VZ4 500 aa13.95□□□□□ -0.18
CHRNE-201ENST00000293780 MGST2Q99735 147 aa13.95□□□□□ -0.18
CHRNE-201ENST00000293780 MS4A5Q9H3V2 200 aa13.95□□□□□ -0.18
CHRNE-201ENST00000293780 HEYLQ9NQ87 328 aaPredicted RBP13.95□□□□□ -0.18
CHRNE-201ENST00000293780 DUSP13Q9UII6 198 aa13.95□□□□□ -0.18
CHRNE-201ENST00000293780 IGHV2OR16-5A0A0B4J2B6 119 aa13.95□□□□□ -0.18
CHRNE-201ENST00000293780 IGHG3P01860 377 aa13.95□□□□□ -0.18
CHRNE-201ENST00000293780 IL3RAP26951 378 aa13.95□□□□□ -0.18
CHRNE-201ENST00000293780 RAB4BP61018 213 aa13.95□□□□□ -0.18
CHRNE-201ENST00000293780 NUTF2P61970 127 aaKnown RBP13.95□□□□□ -0.18
CHRNE-201ENST00000293780 FDCSPQ8NFU4 85 aa13.95□□□□□ -0.18
CHRNE-201ENST00000293780 SMG1Q96Q15 3661 aaKnown RBP13.94□□□□□ -0.18
CHRNE-201ENST00000293780 IGHV1-18A0A0C4DH31 117 aa13.94□□□□□ -0.18
CHRNE-201ENST00000293780 SOX15O60248 233 aa13.94□□□□□ -0.18
CHRNE-201ENST00000293780 VDAC2P45880 294 aaPredicted RBP13.94□□□□□ -0.18
CHRNE-201ENST00000293780 PDLIM4P50479 330 aa13.94□□□□□ -0.18
CHRNE-201ENST00000293780 FAM90A1Q86YD7 464 aa13.94□□□□□ -0.18
CHRNE-201ENST00000293780 ZNRF1Q8ND25 227 aa13.94□□□□□ -0.18
CHRNE-201ENST00000293780 BEND2Q8NDZ0 799 aa13.94□□□□□ -0.18
CHRNE-201ENST00000293780 LEAP2Q969E1 77 aa13.94□□□□□ -0.18
CHRNE-201ENST00000293780 ACY3Q96HD9 319 aa13.94□□□□□ -0.18
CHRNE-201ENST00000293780 LAMA5O15230 3695 aa13.94□□□□□ -0.18
CHRNE-201ENST00000293780 ARL14EPLP0DKL9 152 aa13.93□□□□□ -0.18
CHRNE-201ENST00000293780 BTF3P20290 206 aaKnown RBP13.93□□□□□ -0.18
CHRNE-201ENST00000293780 HNF1AP20823 631 aa13.93□□□□□ -0.18
CHRNE-201ENST00000293780 OPN3Q9H1Y3 402 aaPredicted RBP13.93□□□□□ -0.18
CHRNE-201ENST00000293780 A0A0U1RQK1 487 aa13.93□□□□□ -0.18
CHRNE-201ENST00000293780 ZNF320A2RRD8 509 aa13.93□□□□□ -0.18
CHRNE-201ENST00000293780 AQP7O14520 342 aa13.93□□□□□ -0.18
CHRNE-201ENST00000293780 EREGO14944 169 aa13.93□□□□□ -0.18
CHRNE-201ENST00000293780 RBFOX2O43251 390 aaKnown RBP eCLIP13.93□□□□□ -0.18
CHRNE-201ENST00000293780 PDE6DO43924 150 aa13.93□□□□□ -0.18
CHRNE-201ENST00000293780 GFRA3O60609 400 aa13.93□□□□□ -0.18
CHRNE-201ENST00000293780 TYMSP04818 313 aa13.93□□□□□ -0.18
CHRNE-201ENST00000293780 RELBQ01201 579 aa13.93□□□□□ -0.18
CHRNE-201ENST00000293780 CISD2Q8N5K1 135 aaKnown RBP13.93□□□□□ -0.18
CHRNE-201ENST00000293780 C1orf159Q96HA4 380 aa13.93□□□□□ -0.18
CHRNE-201ENST00000293780 BOD1L1Q8NFC6 3051 aa13.93□□□□□ -0.18
CHRNE-201ENST00000293780 CACNA1HO95180 2353 aa13.93□□□□□ -0.18
CHRNE-201ENST00000293780 TRBV20OR9-2A0A075B6H5 130 aa13.92□□□□□ -0.18
CHRNE-201ENST00000293780 A0A1B0GUS0 222 aa13.92□□□□□ -0.18
CHRNE-201ENST00000293780 PRSS46E5RG02 174 aa13.92□□□□□ -0.18
CHRNE-201ENST00000293780 GCGP01275 180 aa13.92□□□□□ -0.18
CHRNE-201ENST00000293780 AARDQ4LEZ3 155 aa13.92□□□□□ -0.18
CHRNE-201ENST00000293780 KCNIP4Q6PIL6 250 aa13.92□□□□□ -0.18
CHRNE-201ENST00000293780 SSMEM1Q8WWF3 244 aa13.92□□□□□ -0.18
CHRNE-201ENST00000293780 RAB1CQ92928 201 aa13.92□□□□□ -0.18
CHRNE-201ENST00000293780 KCNIP2Q9NS61 270 aa13.92□□□□□ -0.18
CHRNE-201ENST00000293780 PXMP4Q9Y6I8 212 aa13.92□□□□□ -0.18
CHRNE-201ENST00000293780 ICE1Q9Y2F5 2266 aa13.92□□□□□ -0.18
CHRNE-201ENST00000293780 CASP6P55212 293 aa13.92□□□□□ -0.18
CHRNE-201ENST00000293780 LOXL3P58215 753 aa13.92□□□□□ -0.18
CHRNE-201ENST00000293780 PDLIM3Q53GG5 364 aaPredicted RBP13.92□□□□□ -0.18
CHRNE-201ENST00000293780 MBNL2Q5VZF2 373 aaKnown RBP13.92□□□□□ -0.18
CHRNE-201ENST00000293780 ATG101Q9BSB4 218 aa13.92□□□□□ -0.18
CHRNE-201ENST00000293780 GGTLC1Q9BX51 225 aa13.92□□□□□ -0.18
CHRNE-201ENST00000293780 TMPRSS2O15393 492 aa13.91□□□□□ -0.18
CHRNE-201ENST00000293780 OPRK1P41145 380 aa13.91□□□□□ -0.18
CHRNE-201ENST00000293780 RPL15P61313 204 aaKnown RBP13.91□□□□□ -0.18
CHRNE-201ENST00000293780 IFI27L2Q9H2X8 130 aa13.91□□□□□ -0.18
CHRNE-201ENST00000293780 TMEM140Q9NV12 185 aa13.91□□□□□ -0.18
CHRNE-201ENST00000293780 SCO2A0A1W2PP80 73 aa13.91□□□□□ -0.18
CHRNE-201ENST00000293780 SRRM5B3KS81 715 aa13.91□□□□□ -0.18
CHRNE-201ENST00000293780 IGLV1-44P01699 117 aa13.91□□□□□ -0.18
CHRNE-201ENST00000293780 GCSAMQ8N6F7 178 aa13.91□□□□□ -0.18
CHRNE-201ENST00000293780 JPT1Q9UK76 154 aa13.91□□□□□ -0.18
CHRNE-201ENST00000293780 YPEL1O60688 119 aa13.9□□□□□ -0.18
CHRNE-201ENST00000293780 STAG3L2P0CL84 134 aa13.9□□□□□ -0.18
CHRNE-201ENST00000293780 STAG3L3P0CL85 134 aa13.9□□□□□ -0.18
CHRNE-201ENST00000293780 CNN1P51911 297 aaKnown RBP13.9□□□□□ -0.18
CHRNE-201ENST00000293780 TRIP6Q15654 476 aaKnown RBP13.9□□□□□ -0.18
CHRNE-201ENST00000293780 FAM201AQ5SY85 155 aa13.9□□□□□ -0.18
CHRNE-201ENST00000293780 SPATA31B1PQ5VZV4 182 aa13.9□□□□□ -0.18
CHRNE-201ENST00000293780 TRAT1Q6PIZ9 186 aa13.9□□□□□ -0.18
CHRNE-201ENST00000293780 TCF23Q7RTU1 214 aa13.9□□□□□ -0.18
CHRNE-201ENST00000293780 TMEM144Q7Z5S9 345 aa13.9□□□□□ -0.18
CHRNE-201ENST00000293780 C1orf162Q8NEQ5 155 aaPredicted RBP13.9□□□□□ -0.18
CHRNE-201ENST00000293780 YPEL2Q96QA6 119 aa13.9□□□□□ -0.18
CHRNE-201ENST00000293780 S1PR3Q99500 378 aa13.9□□□□□ -0.18
CHRNE-201ENST00000293780 TRAPPC1Q9Y5R8 145 aa13.9□□□□□ -0.18
CHRNE-201ENST00000293780 ZNF318Q5VUA4 2279 aa13.9□□□□□ -0.18
CHRNE-201ENST00000293780 PRR33A8MZF0 331 aa13.9□□□□□ -0.18
CHRNE-201ENST00000293780 RPP30P78346 268 aaKnown RBP13.9□□□□□ -0.18
CHRNE-201ENST00000293780 TMEM249Q2WGJ8 235 aa13.9□□□□□ -0.18
CHRNE-201ENST00000293780 SGMS2Q8NHU3 365 aa13.9□□□□□ -0.18
CHRNE-201ENST00000293780 SFRP2Q96HF1 295 aa13.9□□□□□ -0.18
CHRNE-201ENST00000293780 TCF19Q9Y242 345 aa13.9□□□□□ -0.18
CHRNE-201ENST00000293780 YTHDF2Q9Y5A9 579 aaKnown RBP13.9□□□□□ -0.18
CHRNE-201ENST00000293780 CACNA1GO43497 2377 aa13.89□□□□□ -0.19
CHRNE-201ENST00000293780 MYOD1P15172 320 aa13.89□□□□□ -0.19
CHRNE-201ENST00000293780 ERVK-16P61578 105 aa13.89□□□□□ -0.19
CHRNE-201ENST00000293780 LCN2P80188 198 aa13.89□□□□□ -0.19
CHRNE-201ENST00000293780 PAX5Q02548 391 aa13.89□□□□□ -0.19
CHRNE-201ENST00000293780 OR52E5Q8NH55 327 aa13.89□□□□□ -0.19
CHRNE-201ENST00000293780 TMEM68Q96MH6 324 aa13.89□□□□□ -0.19
CHRNE-201ENST00000293780 PLSCR4Q9NRQ2 329 aa13.89□□□□□ -0.19
CHRNE-201ENST00000293780 FAM90A9PA6NNJ1 464 aa13.89□□□□□ -0.19
CHRNE-201ENST00000293780 F6UZH7 168 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 160.9 ms