RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 UBE2G1P62253 170 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 RUNX1Q01196 453 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 ZNF345Q14585 488 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 CT45A1Q5HYN5 189 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 NHLRC3Q5JS37 347 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 VAX1Q5SQQ9 334 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 STPG2Q8N412 459 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 TPRX1Q8N7U7 411 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 OR5A2Q8NGI9 324 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 OR4D5Q8NGN0 318 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 CT45A3Q8NHU0 189 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 FLVCR1-AS1Q8TAF5 88 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 BTF3L4Q96K17 158 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 OR2A7Q96R45 310 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 SEC11CQ9BY50 192 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 TLNRD1Q9H1K6 362 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 AUP1Q9Y679 476 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 ANKRD36A6QL64 1941 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 POLEQ07864 2286 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 PPIAL4CA0A0B4J2A2 164 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 SPAARA0A1B0GVQ0 90 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 TMEM213A2RRL7 107 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 OR5H1A6NKK0 313 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 FAM74A7A6NL05 159 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 DHRS7CA6NNS2 312 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 G3V3Q6 166 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 RPL36A-HNRNPH2H7BZ11 118 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 M0R296 226 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 SP1P08047 785 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 IFI6P09912 130 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 PPIAL4GP0DN37 164 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 MUC1P15941 1255 aaPredicted RBP2.41□□□□□ -2.02
HERC4-201ENST00000277817 ATP6V0CP27449 155 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 MPGP29372 298 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 G6PCP35575 357 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 RBM11P57052 281 aaKnown RBP2.41□□□□□ -2.02
HERC4-201ENST00000277817 ERVFC1-1P60608 527 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 HLA-DRB3P79483 266 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 KLRB1Q12918 225 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 FAM74A3Q4VXF1 159 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 MDP1Q86V88 176 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 LHFPL5Q8TAF8 219 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 SLC25A40Q8TBP6 338 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 DNASE2BQ8WZ79 361 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 FAM210BQ96KR6 192 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 MCRIP2Q9BUT9 160 aaKnown RBP2.41□□□□□ -2.02
HERC4-201ENST00000277817 HES7Q9BYE0 225 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 TTTY12Q9BZ98 90 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 ZDHHC11Q9H8X9 412 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 ZNF71Q9NQZ8 489 aaPredicted RBP2.41□□□□□ -2.02
HERC4-201ENST00000277817 AURKAIP1Q9NWT8 199 aaPredicted RBP2.41□□□□□ -2.02
HERC4-201ENST00000277817 ZNF835Q9Y2P0 537 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 OR2W1Q9Y3N9 320 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 SNRNP200O75643 2136 aaKnown RBP2.41□□□□□ -2.02
HERC4-201ENST00000277817 EYSQ5T1H1 3165 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 A0A1B0GUS0 222 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 H3BQ15 152 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 J3QRE1 110 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 EIF3GO75821 320 aaKnown RBP eCLIP2.41□□□□□ -2.02
HERC4-201ENST00000277817 LYPD3O95274 346 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 CDS2O95674 445 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 HAND1O96004 215 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 BTCP35070 178 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 MDH2P40926 338 aaKnown RBP2.41□□□□□ -2.02
HERC4-201ENST00000277817 NPBWR2P48146 333 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 SULT1A1P50225 295 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 TAS2R45P59539 299 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 UNC119Q13432 240 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 TGIF1Q15583 401 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 FBXW9Q5XUX1 488 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 ZNF880Q6PDB4 577 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 MOB1BQ7L9L4 216 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 SLC36A1Q7Z2H8 476 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 APRG1Q8IVJ8 170 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 PUSL1Q8N0Z8 303 aaKnown RBP2.41□□□□□ -2.02
HERC4-201ENST00000277817 TMEM251Q8N6I4 163 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 POM121L2Q96KW2 1035 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 ATP5SQ99766 215 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 SOSTQ9BQB4 213 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 TM2D2Q9BX73 214 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 SRXN1Q9BYN0 137 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 CLCF1Q9UBD9 225 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 ROS1P08922 2347 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 MKI67P46013 3256 aaKnown RBP2.41□□□□□ -2.02
HERC4-201ENST00000277817 DOCK4Q8N1I0 1966 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 HEATR5BQ9P2D3 2071 aa2.4□□□□□ -2.02
HERC4-201ENST00000277817 THADAQ6YHU6 1953 aa2.4□□□□□ -2.02
HERC4-201ENST00000277817 IGKV3D-11A0A0A0MRZ8 115 aa2.4□□□□□ -2.02
HERC4-201ENST00000277817 TMEM14DPA8MWL7 114 aa2.4□□□□□ -2.02
HERC4-201ENST00000277817 SYNGR1O43759 233 aa2.4□□□□□ -2.02
HERC4-201ENST00000277817 HRASP01112 189 aa2.4□□□□□ -2.02
HERC4-201ENST00000277817 SEC11BP0C7V7 166 aa2.4□□□□□ -2.02
HERC4-201ENST00000277817 PRF1P14222 555 aa2.4□□□□□ -2.02
HERC4-201ENST00000277817 PPP1CCP36873 323 aaKnown RBP2.4□□□□□ -2.02
HERC4-201ENST00000277817 GALR1P47211 349 aa2.4□□□□□ -2.02
HERC4-201ENST00000277817 FHITP49789 147 aa2.4□□□□□ -2.02
HERC4-201ENST00000277817 MEOX2P50222 304 aa2.4□□□□□ -2.02
HERC4-201ENST00000277817 KLF3P57682 345 aaPredicted RBP2.4□□□□□ -2.02
HERC4-201ENST00000277817 ERVS71-1P61550 626 aa2.4□□□□□ -2.02
HERC4-201ENST00000277817 IZUMO4Q1ZYL8 232 aa2.4□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms