RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 LY96Q9Y6Y9 160 aa8.62□□□□□ -1.03
UPF3B-201ENST00000276201 C19orf84I3L1E1 186 aa8.61□□□□□ -1.03
UPF3B-201ENST00000276201 GPM6AP51674 278 aa8.61□□□□□ -1.03
UPF3B-201ENST00000276201 EIF4EBP1Q13541 118 aaPredicted RBP8.61□□□□□ -1.03
UPF3B-201ENST00000276201 FFAR4Q5NUL3 377 aa8.61□□□□□ -1.03
UPF3B-201ENST00000276201 ZNF497Q6ZNH5 498 aa8.61□□□□□ -1.03
UPF3B-201ENST00000276201 NUFIP2Q7Z417 695 aaKnown RBP8.61□□□□□ -1.03
UPF3B-201ENST00000276201 FAM58AQ8N1B3 248 aa8.61□□□□□ -1.03
UPF3B-201ENST00000276201 ATG101Q9BSB4 218 aa8.61□□□□□ -1.03
UPF3B-201ENST00000276201 SLC25A22Q9H936 323 aa8.61□□□□□ -1.03
UPF3B-201ENST00000276201 MBNL3Q9NUK0 354 aaKnown RBP8.61□□□□□ -1.03
UPF3B-201ENST00000276201 TRBV9A0A0B4J1U6 114 aa8.61□□□□□ -1.03
UPF3B-201ENST00000276201 C11orf94C9JXX5 98 aa8.61□□□□□ -1.03
UPF3B-201ENST00000276201 RAB29O14966 203 aa8.61□□□□□ -1.03
UPF3B-201ENST00000276201 PAGE4O60829 102 aa8.61□□□□□ -1.03
UPF3B-201ENST00000276201 PATE4P0C8F1 98 aa8.61□□□□□ -1.03
UPF3B-201ENST00000276201 PRSS12P56730 875 aa8.61□□□□□ -1.03
UPF3B-201ENST00000276201 Q0VG73 95 aa8.61□□□□□ -1.03
UPF3B-201ENST00000276201 FOXF2Q12947 444 aa8.61□□□□□ -1.03
UPF3B-201ENST00000276201 TPTE2P1Q5T6R2 138 aa8.61□□□□□ -1.03
UPF3B-201ENST00000276201 FAM78BQ5VT40 261 aa8.61□□□□□ -1.03
UPF3B-201ENST00000276201 MRPL21Q7Z2W9 205 aaKnown RBP8.61□□□□□ -1.03
UPF3B-201ENST00000276201 FGFRL1Q8N441 504 aa8.61□□□□□ -1.03
UPF3B-201ENST00000276201 WDR31Q8NA23 367 aa8.61□□□□□ -1.03
UPF3B-201ENST00000276201 OR10D3Q8NH80 312 aa8.61□□□□□ -1.03
UPF3B-201ENST00000276201 ALKBH3Q96Q83 286 aaPredicted RBP8.61□□□□□ -1.03
UPF3B-201ENST00000276201 TBX15Q96SF7 602 aa8.61□□□□□ -1.03
UPF3B-201ENST00000276201 TMEM204Q9BSN7 226 aa8.61□□□□□ -1.03
UPF3B-201ENST00000276201 NPCDR1Q9BY65 106 aa8.61□□□□□ -1.03
UPF3B-201ENST00000276201 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.61□□□□□ -1.03
UPF3B-201ENST00000276201 UNC79Q9P2D8 2635 aa8.6□□□□□ -1.03
UPF3B-201ENST00000276201 MED12LQ86YW9 2145 aa8.6□□□□□ -1.03
UPF3B-201ENST00000276201 A0A0U1RQK1 487 aa8.6□□□□□ -1.03
UPF3B-201ENST00000276201 ZNF320A2RRD8 509 aa8.6□□□□□ -1.03
UPF3B-201ENST00000276201 CXCL13O43927 109 aa8.6□□□□□ -1.03
UPF3B-201ENST00000276201 MPDU1O75352 247 aa8.6□□□□□ -1.03
UPF3B-201ENST00000276201 KRASP01116 189 aa8.6□□□□□ -1.03
UPF3B-201ENST00000276201 GNG3P63215 75 aa8.6□□□□□ -1.03
UPF3B-201ENST00000276201 TFF3Q07654 80 aa8.6□□□□□ -1.03
UPF3B-201ENST00000276201 AARDQ4LEZ3 155 aa8.6□□□□□ -1.03
UPF3B-201ENST00000276201 Q8IYB0 196 aa8.6□□□□□ -1.03
UPF3B-201ENST00000276201 GCNT2Q8N0V5 402 aa8.6□□□□□ -1.03
UPF3B-201ENST00000276201 ZNF709Q8N972 641 aa8.6□□□□□ -1.03
UPF3B-201ENST00000276201 OR10P1Q8NGE3 313 aa8.6□□□□□ -1.03
UPF3B-201ENST00000276201 CMTM2Q8TAZ6 248 aa8.6□□□□□ -1.03
UPF3B-201ENST00000276201 KCNIP1Q9NZI2 227 aa8.6□□□□□ -1.03
UPF3B-201ENST00000276201 IL36RNQ9UBH0 155 aa8.6□□□□□ -1.03
UPF3B-201ENST00000276201 INTS1Q8N201 2190 aaKnown RBP8.6□□□□□ -1.03
UPF3B-201ENST00000276201 LRRC30A6NM36 301 aa8.59□□□□□ -1.03
UPF3B-201ENST00000276201 J3QT63 122 aa8.59□□□□□ -1.03
UPF3B-201ENST00000276201 SYNGR1O43759 233 aa8.59□□□□□ -1.03
UPF3B-201ENST00000276201 BMP5P22003 454 aa8.59□□□□□ -1.03
UPF3B-201ENST00000276201 CDC34P49427 236 aaPredicted RBP8.59□□□□□ -1.03
UPF3B-201ENST00000276201 GNB1P62873 340 aa8.59□□□□□ -1.03
UPF3B-201ENST00000276201 TMEM183BQ1AE95 376 aa8.59□□□□□ -1.03
UPF3B-201ENST00000276201 IZUMO4Q1ZYL8 232 aa8.59□□□□□ -1.03
UPF3B-201ENST00000276201 DRAM1Q8N682 238 aa8.59□□□□□ -1.03
UPF3B-201ENST00000276201 SFRP2Q96HF1 295 aa8.59□□□□□ -1.03
UPF3B-201ENST00000276201 OR1A1Q9P1Q5 309 aa8.59□□□□□ -1.03
UPF3B-201ENST00000276201 SAA2-SAA4A0A096LPE2 208 aa8.59□□□□□ -1.03
UPF3B-201ENST00000276201 REG1AP05451 166 aa8.59□□□□□ -1.03
UPF3B-201ENST00000276201 G0S2P27469 103 aa8.59□□□□□ -1.03
UPF3B-201ENST00000276201 GCH1P30793 250 aa8.59□□□□□ -1.03
UPF3B-201ENST00000276201 BRS3P32247 399 aa8.59□□□□□ -1.03
UPF3B-201ENST00000276201 MRPS11P82912 194 aaKnown RBP8.59□□□□□ -1.03
UPF3B-201ENST00000276201 COX19Q49B96 90 aa8.59□□□□□ -1.03
UPF3B-201ENST00000276201 TMEM256Q8N2U0 113 aa8.59□□□□□ -1.03
UPF3B-201ENST00000276201 ZNF645Q8N7E2 425 aa8.59□□□□□ -1.03
UPF3B-201ENST00000276201 Q8N7P7 452 aa8.59□□□□□ -1.03
UPF3B-201ENST00000276201 WDR83OSQ9Y284 106 aa8.59□□□□□ -1.03
UPF3B-201ENST00000276201 CENPEQ02224 2701 aa8.59□□□□□ -1.03
UPF3B-201ENST00000276201 HCFC1P51610 2035 aa8.59□□□□□ -1.04
UPF3B-201ENST00000276201 FAM90A9PA6NNJ1 464 aa8.58□□□□□ -1.04
UPF3B-201ENST00000276201 IL6RP08887 468 aaPredicted RBP8.58□□□□□ -1.04
UPF3B-201ENST00000276201 CD1BP29016 333 aa8.58□□□□□ -1.04
UPF3B-201ENST00000276201 ARR3P36575 388 aa8.58□□□□□ -1.04
UPF3B-201ENST00000276201 FAM216AQ8WUB2 273 aa8.58□□□□□ -1.04
UPF3B-201ENST00000276201 GATAD1Q8WUU5 269 aa8.58□□□□□ -1.04
UPF3B-201ENST00000276201 RDH5Q92781 318 aa8.58□□□□□ -1.04
UPF3B-201ENST00000276201 SFXN3Q9BWM7 321 aa8.58□□□□□ -1.04
UPF3B-201ENST00000276201 CRIM1Q9NZV1 1036 aa8.58□□□□□ -1.04
UPF3B-201ENST00000276201 MDFIC2A0A1B0GVS7 189 aa8.58□□□□□ -1.04
UPF3B-201ENST00000276201 ZNF705FA8MVS1 300 aaPredicted RBP8.58□□□□□ -1.04
UPF3B-201ENST00000276201 ZNF705DP0CH99 300 aaPredicted RBP8.58□□□□□ -1.04
UPF3B-201ENST00000276201 ZNF705BP0CI00 300 aaPredicted RBP8.58□□□□□ -1.04
UPF3B-201ENST00000276201 ADMP35318 185 aa8.58□□□□□ -1.04
UPF3B-201ENST00000276201 CHRNA7P36544 502 aa8.58□□□□□ -1.04
UPF3B-201ENST00000276201 GUSBP1Q15486 140 aa8.58□□□□□ -1.04
UPF3B-201ENST00000276201 OR8G2PQ6IF36 304 aa8.58□□□□□ -1.04
UPF3B-201ENST00000276201 Q6ZWC4 215 aa8.58□□□□□ -1.04
UPF3B-201ENST00000276201 AURKAIP1Q9NWT8 199 aaPredicted RBP8.58□□□□□ -1.04
UPF3B-201ENST00000276201 TP53TG3Q9ULZ0 132 aa8.58□□□□□ -1.04
UPF3B-201ENST00000276201 PPP1R3CQ9UQK1 317 aa8.58□□□□□ -1.04
UPF3B-201ENST00000276201 ARL2-SNX15V9GYD0 113 aa8.58□□□□□ -1.04
UPF3B-201ENST00000276201 ADGRG4Q8IZF6 3080 aa8.58□□□□□ -1.04
UPF3B-201ENST00000276201 ANKRD30BLA7E2S9 258 aa8.57□□□□□ -1.04
UPF3B-201ENST00000276201 CYSRT1A8MQ03 144 aa8.57□□□□□ -1.04
UPF3B-201ENST00000276201 C9JCJ5 164 aa8.57□□□□□ -1.04
UPF3B-201ENST00000276201 J3QW42 95 aa8.57□□□□□ -1.04
UPF3B-201ENST00000276201 IGFBP2P18065 325 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 211.1 ms