RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 HOXB1P14653 301 aaPredicted RBP12.06□□□□□ -0.48
TMEM47-201ENST00000275954 RPL11P62913 178 aaKnown RBP12.06□□□□□ -0.48
TMEM47-201ENST00000275954 HIST1H3AP68431 136 aa12.06□□□□□ -0.48
TMEM47-201ENST00000275954 GAMTQ14353 236 aa12.06□□□□□ -0.48
TMEM47-201ENST00000275954 ZNF106Q9H2Y7 1883 aaKnown RBP12.06□□□□□ -0.48
TMEM47-201ENST00000275954 RAB4AP20338 218 aa12.05□□□□□ -0.48
TMEM47-201ENST00000275954 GNLYP22749 145 aa12.05□□□□□ -0.48
TMEM47-201ENST00000275954 CNN1P51911 297 aaKnown RBP12.05□□□□□ -0.48
TMEM47-201ENST00000275954 PMS2P11Q13670 270 aa12.05□□□□□ -0.48
TMEM47-201ENST00000275954 MIOXQ9UGB7 285 aa12.05□□□□□ -0.48
TMEM47-201ENST00000275954 DBX1A6NMT0 343 aa12.05□□□□□ -0.48
TMEM47-201ENST00000275954 OR10J1P30954 320 aa12.05□□□□□ -0.48
TMEM47-201ENST00000275954 CAMPP49913 170 aa12.05□□□□□ -0.48
TMEM47-201ENST00000275954 NUBP1P53384 320 aa12.05□□□□□ -0.48
TMEM47-201ENST00000275954 TMEM42Q69YG0 159 aa12.05□□□□□ -0.48
TMEM47-201ENST00000275954 OR1B1Q8NGR6 318 aa12.05□□□□□ -0.48
TMEM47-201ENST00000275954 IL22RA2Q969J5 263 aa12.05□□□□□ -0.48
TMEM47-201ENST00000275954 LSM10Q969L4 123 aaKnown RBP12.05□□□□□ -0.48
TMEM47-201ENST00000275954 MEGF10Q96KG7 1140 aa12.05□□□□□ -0.48
TMEM47-201ENST00000275954 CRIM1Q9NZV1 1036 aa12.05□□□□□ -0.48
TMEM47-201ENST00000275954 TCF19Q9Y242 345 aa12.05□□□□□ -0.48
TMEM47-201ENST00000275954 TMEM56-RWDD3S4R434 201 aa12.05□□□□□ -0.48
TMEM47-201ENST00000275954 GLRXP35754 106 aa12.05□□□□□ -0.48
TMEM47-201ENST00000275954 KIR2DS2P43631 304 aa12.05□□□□□ -0.48
TMEM47-201ENST00000275954 SPCS3P61009 180 aa12.05□□□□□ -0.48
TMEM47-201ENST00000275954 SLC35E4Q6ICL7 350 aa12.05□□□□□ -0.48
TMEM47-201ENST00000275954 EIF4E3Q8N5X7 224 aaKnown RBP12.05□□□□□ -0.48
TMEM47-201ENST00000275954 NPVFQ9HCQ7 196 aa12.05□□□□□ -0.48
TMEM47-201ENST00000275954 FN1P02751 2386 aaKnown RBP12.04□□□□□ -0.48
TMEM47-201ENST00000275954 ZNF503-AS2A6NEH8 195 aa12.04□□□□□ -0.48
TMEM47-201ENST00000275954 FCN1O00602 326 aa12.04□□□□□ -0.48
TMEM47-201ENST00000275954 FGF16O43320 207 aa12.04□□□□□ -0.48
TMEM47-201ENST00000275954 C16orf82Q7Z2V1 217 aa12.04□□□□□ -0.48
TMEM47-201ENST00000275954 SLC25A5P05141 298 aaKnown RBP12.04□□□□□ -0.48
TMEM47-201ENST00000275954 KRTDAPP60985 99 aa12.04□□□□□ -0.48
TMEM47-201ENST00000275954 WDR82Q6UXN9 313 aa12.04□□□□□ -0.48
TMEM47-201ENST00000275954 OR10G8Q8NGN5 311 aa12.04□□□□□ -0.48
TMEM47-201ENST00000275954 GP6Q9HCN6 339 aa12.04□□□□□ -0.48
TMEM47-201ENST00000275954 FKBP11Q9NYL4 201 aa12.04□□□□□ -0.48
TMEM47-201ENST00000275954 PRNDQ9UKY0 176 aa12.04□□□□□ -0.48
TMEM47-201ENST00000275954 SGMS2Q8NHU3 365 aa12.04□□□□□ -0.48
TMEM47-201ENST00000275954 WDR61Q9GZS3 305 aaKnown RBP12.04□□□□□ -0.48
TMEM47-201ENST00000275954 IFT22Q9H7X7 185 aa12.04□□□□□ -0.48
TMEM47-201ENST00000275954 MANBALQ9NQG1 85 aa12.04□□□□□ -0.48
TMEM47-201ENST00000275954 PMCHP20382 165 aa12.03□□□□□ -0.48
TMEM47-201ENST00000275954 KIR2DL2P43627 348 aaPredicted RBP12.03□□□□□ -0.48
TMEM47-201ENST00000275954 LYZP61626 148 aa12.03□□□□□ -0.48
TMEM47-201ENST00000275954 ID3Q02535 119 aa12.03□□□□□ -0.48
TMEM47-201ENST00000275954 KRTCAP3Q53RY4 240 aa12.03□□□□□ -0.48
TMEM47-201ENST00000275954 METRNQ9UJH8 293 aa12.03□□□□□ -0.48
TMEM47-201ENST00000275954 SLC25A17O43808 307 aa12.03□□□□□ -0.48
TMEM47-201ENST00000275954 CTRB1P17538 263 aa12.03□□□□□ -0.48
TMEM47-201ENST00000275954 TFF3Q07654 80 aa12.03□□□□□ -0.48
TMEM47-201ENST00000275954 RTP5Q14D33 572 aa12.03□□□□□ -0.48
TMEM47-201ENST00000275954 CTRB2Q6GPI1 263 aa12.03□□□□□ -0.48
TMEM47-201ENST00000275954 KDF1Q8NAX2 398 aaPredicted RBP12.03□□□□□ -0.48
TMEM47-201ENST00000275954 OR4X1Q8NH49 305 aa12.03□□□□□ -0.48
TMEM47-201ENST00000275954 ZNF714Q96N38 554 aa12.03□□□□□ -0.48
TMEM47-201ENST00000275954 CARHSP1Q9Y2V2 147 aaKnown RBP12.03□□□□□ -0.48
TMEM47-201ENST00000275954 IQCF6A8MYZ5 107 aa12.03□□□□□ -0.48
TMEM47-201ENST00000275954 NAPSAO96009 420 aa12.03□□□□□ -0.48
TMEM47-201ENST00000275954 TIMM23BQ5SRD1 257 aa12.03□□□□□ -0.48
TMEM47-201ENST00000275954 OR1L8Q8NGR8 309 aa12.03□□□□□ -0.48
TMEM47-201ENST00000275954 TGOLN2O43493 480 aa12.02□□□□□ -0.48
TMEM47-201ENST00000275954 REG1AP05451 166 aa12.02□□□□□ -0.48
TMEM47-201ENST00000275954 DHRS7BQ6IAN0 325 aaPredicted RBP12.02□□□□□ -0.48
TMEM47-201ENST00000275954 MRPL54Q6P161 138 aaKnown RBP12.02□□□□□ -0.48
TMEM47-201ENST00000275954 PCGF1Q9BSM1 259 aa12.02□□□□□ -0.48
TMEM47-201ENST00000275954 CISD1Q9NZ45 108 aaKnown RBP12.02□□□□□ -0.48
TMEM47-201ENST00000275954 PEAR1Q5VY43 1037 aaPredicted RBP12.02□□□□□ -0.49
TMEM47-201ENST00000275954 ZNF324BQ6AW86 544 aaPredicted RBP12.02□□□□□ -0.49
TMEM47-201ENST00000275954 FAM53AQ6NSI3 398 aaPredicted RBP12.02□□□□□ -0.49
TMEM47-201ENST00000275954 SPSB4Q96A44 273 aa12.02□□□□□ -0.49
TMEM47-201ENST00000275954 SGK494Q96LW2 274 aa12.02□□□□□ -0.49
TMEM47-201ENST00000275954 HIF1ANQ9NWT6 349 aa12.02□□□□□ -0.49
TMEM47-201ENST00000275954 LYNX1G3V0Z9 82 aa12.02□□□□□ -0.49
TMEM47-201ENST00000275954 LYNX1P0DP58 116 aa12.02□□□□□ -0.49
TMEM47-201ENST00000275954 RANP62826 216 aaKnown RBP12.02□□□□□ -0.49
TMEM47-201ENST00000275954 FOXL2NBQ6ZUU3 175 aa12.02□□□□□ -0.49
TMEM47-201ENST00000275954 VSTM2AQ8TAG5 236 aa12.02□□□□□ -0.49
TMEM47-201ENST00000275954 GPR61Q9BZJ8 451 aa12.02□□□□□ -0.49
TMEM47-201ENST00000275954 HILPDAQ9Y5L2 63 aa12.02□□□□□ -0.49
TMEM47-201ENST00000275954 A0A1W2PN81 502 aa12.01□□□□□ -0.49
TMEM47-201ENST00000275954 LY86O95711 162 aa12.01□□□□□ -0.49
TMEM47-201ENST00000275954 PRRX1P54821 245 aa12.01□□□□□ -0.49
TMEM47-201ENST00000275954 HERPUD1Q15011 391 aa12.01□□□□□ -0.49
TMEM47-201ENST00000275954 DNM1P46Q6ZS02 220 aa12.01□□□□□ -0.49
TMEM47-201ENST00000275954 MDS2Q8NDY4 140 aa12.01□□□□□ -0.49
TMEM47-201ENST00000275954 OR4D5Q8NGN0 318 aa12.01□□□□□ -0.49
TMEM47-201ENST00000275954 TECRQ9NZ01 308 aaKnown RBP12.01□□□□□ -0.49
TMEM47-201ENST00000275954 A0A0G2JRQ6 117 aa12.01□□□□□ -0.49
TMEM47-201ENST00000275954 CFPP27918 469 aa12.01□□□□□ -0.49
TMEM47-201ENST00000275954 HSPE1P61604 102 aaKnown RBP12.01□□□□□ -0.49
TMEM47-201ENST00000275954 ZNF497Q6ZNH5 498 aa12.01□□□□□ -0.49
TMEM47-201ENST00000275954 DTX1Q86Y01 620 aa12.01□□□□□ -0.49
TMEM47-201ENST00000275954 SIGLECL1Q8N7X8 197 aa12.01□□□□□ -0.49
TMEM47-201ENST00000275954 POM121Q96HA1 1249 aa12.01□□□□□ -0.49
TMEM47-201ENST00000275954 FRYQ5TBA9 3013 aa12.01□□□□□ -0.49
TMEM47-201ENST00000275954 J3QW42 95 aa12.01□□□□□ -0.49
TMEM47-201ENST00000275954 CD40P25942 277 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms