RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 MVB12AQ96EY5 273 aa9.64□□□□□ -0.87
CHFR-201ENST00000266880 PLXNA1Q9UIW2 1896 aa9.64□□□□□ -0.87
CHFR-201ENST00000266880 A0A1W2PP11 408 aa9.64□□□□□ -0.87
CHFR-201ENST00000266880 J3QT63 122 aa9.64□□□□□ -0.87
CHFR-201ENST00000266880 UCP1P25874 307 aa9.64□□□□□ -0.87
CHFR-201ENST00000266880 CT62P0C5K7 136 aa9.63□□□□□ -0.87
CHFR-201ENST00000266880 NR2C2APQ86WQ0 139 aa9.63□□□□□ -0.87
CHFR-201ENST00000266880 TMEM252Q8N6L7 170 aa9.63□□□□□ -0.87
CHFR-201ENST00000266880 OR4D11Q8NGI4 311 aa9.63□□□□□ -0.87
CHFR-201ENST00000266880 C7orf66A4D0T2 115 aa9.63□□□□□ -0.87
CHFR-201ENST00000266880 ZBTB34Q8NCN2 500 aa9.63□□□□□ -0.87
CHFR-201ENST00000266880 RAX2Q96IS3 184 aa9.63□□□□□ -0.87
CHFR-201ENST00000266880 FGF5P12034 268 aa9.63□□□□□ -0.87
CHFR-201ENST00000266880 IFITM3Q01628 133 aa9.63□□□□□ -0.87
CHFR-201ENST00000266880 ELSPBP1Q96BH3 223 aa9.63□□□□□ -0.87
CHFR-201ENST00000266880 RNF7Q9UBF6 113 aa9.63□□□□□ -0.87
CHFR-201ENST00000266880 PSG1P11464 419 aa9.63□□□□□ -0.87
CHFR-201ENST00000266880 EGR1P18146 543 aa9.63□□□□□ -0.87
CHFR-201ENST00000266880 LRRC61Q9BV99 259 aa9.63□□□□□ -0.87
CHFR-201ENST00000266880 ZIC3O60481 467 aa9.63□□□□□ -0.87
CHFR-201ENST00000266880 DANCRP0C864 163 aa9.63□□□□□ -0.87
CHFR-201ENST00000266880 HIST1H4AP62805 103 aaKnown RBP9.63□□□□□ -0.87
CHFR-201ENST00000266880 PAPPA-AS1Q5QFB9 102 aa9.63□□□□□ -0.87
CHFR-201ENST00000266880 NAA38Q9BRA0 125 aaKnown RBP9.63□□□□□ -0.87
CHFR-201ENST00000266880 NRN1Q9NPD7 142 aa9.63□□□□□ -0.87
CHFR-201ENST00000266880 KLHDC2Q9Y2U9 406 aa9.63□□□□□ -0.87
CHFR-201ENST00000266880 LIPT2A6NK58 231 aa9.63□□□□□ -0.87
CHFR-201ENST00000266880 SPXQ9BT56 116 aa9.63□□□□□ -0.87
CHFR-201ENST00000266880 NPVFQ9HCQ7 196 aa9.63□□□□□ -0.87
CHFR-201ENST00000266880 ATP5LO75964 103 aa9.63□□□□□ -0.87
CHFR-201ENST00000266880 RND2P52198 227 aa9.63□□□□□ -0.87
CHFR-201ENST00000266880 DUX5Q96PT3 197 aa9.63□□□□□ -0.87
CHFR-201ENST00000266880 M0R381 172 aa9.63□□□□□ -0.87
CHFR-201ENST00000266880 C10orf35Q96D05 121 aa9.63□□□□□ -0.87
CHFR-201ENST00000266880 TMEM106BQ9NUM4 274 aa9.63□□□□□ -0.87
CHFR-201ENST00000266880 ZFP64Q9NPA5 681 aa9.63□□□□□ -0.87
CHFR-201ENST00000266880 TRAV17A0A0B4J275 112 aa9.62□□□□□ -0.87
CHFR-201ENST00000266880 SELLP14151 372 aa9.62□□□□□ -0.87
CHFR-201ENST00000266880 RFLNBQ8N5W9 214 aa9.62□□□□□ -0.87
CHFR-201ENST00000266880 DDX60LQ5H9U9 1706 aaKnown RBP9.62□□□□□ -0.87
CHFR-201ENST00000266880 RBMY1BA6NDE4 496 aaKnown RBP9.62□□□□□ -0.87
CHFR-201ENST00000266880 RBMY1EA6NEQ0 496 aaKnown RBP9.62□□□□□ -0.87
CHFR-201ENST00000266880 S1PR2O95136 353 aa9.62□□□□□ -0.87
CHFR-201ENST00000266880 RBMY1DP0C7P1 496 aaKnown RBP9.62□□□□□ -0.87
CHFR-201ENST00000266880 RBMY1A1P0DJD3 496 aaKnown RBP9.62□□□□□ -0.87
CHFR-201ENST00000266880 RBMY1CP0DJD4 496 aa9.62□□□□□ -0.87
CHFR-201ENST00000266880 SOX8P57073 446 aa9.62□□□□□ -0.87
CHFR-201ENST00000266880 C9orf153Q5TBE3 101 aa9.62□□□□□ -0.87
CHFR-201ENST00000266880 SPINK14Q6IE38 97 aa9.62□□□□□ -0.87
CHFR-201ENST00000266880 KCNE1BA0A087WTH5 132 aa9.62□□□□□ -0.87
CHFR-201ENST00000266880 DCAF10Q5QP82 559 aa9.62□□□□□ -0.87
CHFR-201ENST00000266880 WNT9BO14905 357 aa9.62□□□□□ -0.87
CHFR-201ENST00000266880 HMGA1P17096 107 aaKnown RBP9.62□□□□□ -0.87
CHFR-201ENST00000266880 SLC25A20O43772 301 aa9.62□□□□□ -0.87
CHFR-201ENST00000266880 TRAV5A0A0B4J249 113 aa9.62□□□□□ -0.87
CHFR-201ENST00000266880 KLK10O43240 276 aa9.62□□□□□ -0.87
CHFR-201ENST00000266880 SCTP09683 121 aa9.62□□□□□ -0.87
CHFR-201ENST00000266880 SAMD5Q5TGI4 173 aa9.62□□□□□ -0.87
CHFR-201ENST00000266880 NABP2Q9BQ15 211 aa9.62□□□□□ -0.87
CHFR-201ENST00000266880 TXNDC17Q9BRA2 123 aa9.62□□□□□ -0.87
CHFR-201ENST00000266880 CASP8AP2Q9UKL3 1982 aa9.62□□□□□ -0.87
CHFR-201ENST00000266880 CBLN3Q6UW01 205 aa9.62□□□□□ -0.87
CHFR-201ENST00000266880 KBTBD11-OT1A0A1B0GTJ5 212 aa9.62□□□□□ -0.87
CHFR-201ENST00000266880 ZNHIT1O43257 154 aa9.62□□□□□ -0.87
CHFR-201ENST00000266880 PEX7O00628 323 aa9.61□□□□□ -0.87
CHFR-201ENST00000266880 NPSP0C0P6 89 aa9.61□□□□□ -0.87
CHFR-201ENST00000266880 CDKN1BP46527 198 aa9.61□□□□□ -0.87
CHFR-201ENST00000266880 RPL31P62899 125 aaKnown RBP9.61□□□□□ -0.87
CHFR-201ENST00000266880 OR11H4Q8NGC9 324 aa9.61□□□□□ -0.87
CHFR-201ENST00000266880 SVIPQ8NHG7 77 aa9.61□□□□□ -0.87
CHFR-201ENST00000266880 VKORC1Q9BQB6 163 aa9.61□□□□□ -0.87
CHFR-201ENST00000266880 RAMP1O60894 148 aa9.61□□□□□ -0.87
CHFR-201ENST00000266880 UCP3P55916 312 aa9.61□□□□□ -0.87
CHFR-201ENST00000266880 PNKDQ8N490 385 aa9.61□□□□□ -0.87
CHFR-201ENST00000266880 TPRX1Q8N7U7 411 aa9.61□□□□□ -0.87
CHFR-201ENST00000266880 ZPLD1Q8TCW7 415 aa9.61□□□□□ -0.87
CHFR-201ENST00000266880 PRTN3P24158 256 aa9.61□□□□□ -0.87
CHFR-201ENST00000266880 SELENOTP62341 195 aa9.61□□□□□ -0.87
CHFR-201ENST00000266880 ASCL5Q7RTU5 278 aa9.61□□□□□ -0.87
CHFR-201ENST00000266880 TRAV2A0A0B4J234 112 aa9.61□□□□□ -0.87
CHFR-201ENST00000266880 A8MWV9 139 aa9.61□□□□□ -0.87
CHFR-201ENST00000266880 FOXL2P58012 376 aa9.61□□□□□ -0.87
CHFR-201ENST00000266880 ZNF236Q9UL36 1845 aa9.61□□□□□ -0.87
CHFR-201ENST00000266880 CEACAM4O75871 244 aa9.61□□□□□ -0.87
CHFR-201ENST00000266880 GZMHP20718 246 aa9.61□□□□□ -0.87
CHFR-201ENST00000266880 POU2AF1Q16633 256 aa9.61□□□□□ -0.87
CHFR-201ENST00000266880 GAGE13Q4V321 117 aa9.61□□□□□ -0.87
CHFR-201ENST00000266880 PRR32B1ATL7 298 aa9.61□□□□□ -0.87
CHFR-201ENST00000266880 Q5BKY6 102 aa9.61□□□□□ -0.87
CHFR-201ENST00000266880 TNFRSF6BO95407 300 aa9.61□□□□□ -0.87
CHFR-201ENST00000266880 CCDC144NLQ6NUI1 221 aa9.61□□□□□ -0.87
CHFR-201ENST00000266880 ZNF645Q8N7E2 425 aa9.61□□□□□ -0.87
CHFR-201ENST00000266880 PLXNB2O15031 1838 aa9.61□□□□□ -0.87
CHFR-201ENST00000266880 HOXA3O43365 443 aaPredicted RBP9.61□□□□□ -0.87
CHFR-201ENST00000266880 RNASE4P34096 147 aaKnown RBP9.61□□□□□ -0.87
CHFR-201ENST00000266880 GPR146Q96CH1 333 aa9.61□□□□□ -0.87
CHFR-201ENST00000266880 PARP14Q460N5 1801 aa9.61□□□□□ -0.87
CHFR-201ENST00000266880 PPIAL4EA0A075B759 164 aa9.61□□□□□ -0.87
CHFR-201ENST00000266880 PPIAL4FP0DN26 164 aa9.61□□□□□ -0.87
CHFR-201ENST00000266880 GABRG2P18507 467 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms