RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 OR52M1Q8NGK5 317 aa15.03■□□□□ -0
NOTCH3-201ENST00000263388 ZNF418Q8TF45 676 aaPredicted RBP15.03■□□□□ -0
NOTCH3-201ENST00000263388 SIRT4Q9Y6E7 314 aaPredicted RBP15.03■□□□□ -0
NOTCH3-201ENST00000263388 SIGLEC14Q08ET2 396 aa15.03■□□□□ -0
NOTCH3-201ENST00000263388 OR4D5Q8NGN0 318 aa15.03■□□□□ -0
NOTCH3-201ENST00000263388 NPDC1Q9NQX5 325 aaPredicted RBP15.03■□□□□ -0
NOTCH3-201ENST00000263388 ODAMA1E959 279 aa15.02■□□□□ -0
NOTCH3-201ENST00000263388 TSPOP30536 169 aa15.02■□□□□ -0
NOTCH3-201ENST00000263388 C7orf71A4D174 169 aa15.02■□□□□ -0
NOTCH3-201ENST00000263388 SOD3P08294 240 aa15.02■□□□□ -0
NOTCH3-201ENST00000263388 PRF1P14222 555 aa15.02■□□□□ -0
NOTCH3-201ENST00000263388 HIST1H1AQ02539 215 aaPredicted RBP15.02■□□□□ -0
NOTCH3-201ENST00000263388 PRDM14Q9GZV8 571 aa15.02■□□□□ -0
NOTCH3-201ENST00000263388 PGLYRP1O75594 196 aaPredicted RBP15.02□□□□□ -0.01
NOTCH3-201ENST00000263388 IGHMP01871 453 aa15.02□□□□□ -0.01
NOTCH3-201ENST00000263388 SSTR5P35346 364 aa15.02□□□□□ -0.01
NOTCH3-201ENST00000263388 P2RY4P51582 365 aa15.02□□□□□ -0.01
NOTCH3-201ENST00000263388 LAMTOR1Q6IAA8 161 aa15.02□□□□□ -0.01
NOTCH3-201ENST00000263388 ZNF501Q96CX3 271 aaPredicted RBP15.02□□□□□ -0.01
NOTCH3-201ENST00000263388 PLAURQ03405 335 aa15.02□□□□□ -0.01
NOTCH3-201ENST00000263388 SLC25A53Q5H9E4 307 aa15.02□□□□□ -0.01
NOTCH3-201ENST00000263388 CD200R1LQ6Q8B3 271 aa15.02□□□□□ -0.01
NOTCH3-201ENST00000263388 TNCP24821 2201 aa15.02□□□□□ -0.01
NOTCH3-201ENST00000263388 USF3Q68DE3 2245 aa15.02□□□□□ -0.01
NOTCH3-201ENST00000263388 CENPVL1A0A0U1RR11 272 aa15.02□□□□□ -0.01
NOTCH3-201ENST00000263388 ZFP36L2P47974 494 aaKnown RBP15.02□□□□□ -0.01
NOTCH3-201ENST00000263388 NPIPB13A6NJU9 1138 aa15.01□□□□□ -0.01
NOTCH3-201ENST00000263388 NPIPB4C9JG80 1138 aa15.01□□□□□ -0.01
NOTCH3-201ENST00000263388 TYMSP04818 313 aa15.01□□□□□ -0.01
NOTCH3-201ENST00000263388 ZNF146Q15072 292 aa15.01□□□□□ -0.01
NOTCH3-201ENST00000263388 C1orf100Q5SVJ3 147 aa15.01□□□□□ -0.01
NOTCH3-201ENST00000263388 CCL13Q99616 98 aa15.01□□□□□ -0.01
NOTCH3-201ENST00000263388 A0A1W2PPE3 182 aa15.01□□□□□ -0.01
NOTCH3-201ENST00000263388 MED12LQ86YW9 2145 aa15.01□□□□□ -0.01
NOTCH3-201ENST00000263388 DPH3Q96FX2 82 aa15.01□□□□□ -0.01
NOTCH3-201ENST00000263388 SLC25A47Q6Q0C1 308 aa15.01□□□□□ -0.01
NOTCH3-201ENST00000263388 ZNF488Q96MN9 340 aa15.01□□□□□ -0.01
NOTCH3-201ENST00000263388 BEX4Q9NWD9 120 aaPredicted RBP15.01□□□□□ -0.01
NOTCH3-201ENST00000263388 A0A0J9YW62 118 aa15.01□□□□□ -0.01
NOTCH3-201ENST00000263388 SNAI3Q3KNW1 292 aa15.01□□□□□ -0.01
NOTCH3-201ENST00000263388 SELENOHQ8IZQ5 122 aaKnown RBP15.01□□□□□ -0.01
NOTCH3-201ENST00000263388 TMEM52Q8NDY8 209 aa15.01□□□□□ -0.01
NOTCH3-201ENST00000263388 SMIM8Q96KF7 97 aa15.01□□□□□ -0.01
NOTCH3-201ENST00000263388 FCGR2BP31994 310 aaPredicted RBP15.01□□□□□ -0.01
NOTCH3-201ENST00000263388 NEU1Q99519 415 aa15.01□□□□□ -0.01
NOTCH3-201ENST00000263388 A1L4Q6 167 aa15.01□□□□□ -0.01
NOTCH3-201ENST00000263388 C8orf88P0DMB2 117 aa15.01□□□□□ -0.01
NOTCH3-201ENST00000263388 ANOS1P23352 680 aa15.01□□□□□ -0.01
NOTCH3-201ENST00000263388 GPR82Q96P67 336 aa15.01□□□□□ -0.01
NOTCH3-201ENST00000263388 C2orf16Q68DN1 1984 aa15□□□□□ -0.01
NOTCH3-201ENST00000263388 C1QL1O75973 258 aa15□□□□□ -0.01
NOTCH3-201ENST00000263388 AICDAQ9GZX7 198 aa15□□□□□ -0.01
NOTCH3-201ENST00000263388 NHLRC3Q5JS37 347 aa15□□□□□ -0.01
NOTCH3-201ENST00000263388 HCP5Q6MZN7 132 aa15□□□□□ -0.01
NOTCH3-201ENST00000263388 SPAG8Q99932 426 aaPredicted RBP15□□□□□ -0.01
NOTCH3-201ENST00000263388 TMEM250H0YL14 139 aa15□□□□□ -0.01
NOTCH3-201ENST00000263388 CXorf66Q5JRM2 361 aaPredicted RBP15□□□□□ -0.01
NOTCH3-201ENST00000263388 TMEM101Q96IK0 257 aa15□□□□□ -0.01
NOTCH3-201ENST00000263388 LHFPL6Q9Y693 200 aa15□□□□□ -0.01
NOTCH3-201ENST00000263388 IL11P20809 199 aa15□□□□□ -0.01
NOTCH3-201ENST00000263388 FGF5P12034 268 aa15□□□□□ -0.01
NOTCH3-201ENST00000263388 IFITM3Q01628 133 aa15□□□□□ -0.01
NOTCH3-201ENST00000263388 RNFT1Q5M7Z0 435 aa15□□□□□ -0.01
NOTCH3-201ENST00000263388 PUSL1Q8N0Z8 303 aaKnown RBP15□□□□□ -0.01
NOTCH3-201ENST00000263388 MIC13Q5XKP0 118 aa15□□□□□ -0.01
NOTCH3-201ENST00000263388 WBP1LQ9NX94 342 aa15□□□□□ -0.01
NOTCH3-201ENST00000263388 LTBP4Q8N2S1 1624 aa15□□□□□ -0.01
NOTCH3-201ENST00000263388 PSMG4Q5JS54 123 aa15□□□□□ -0.01
NOTCH3-201ENST00000263388 OBSL1O75147 1896 aa15□□□□□ -0.01
NOTCH3-201ENST00000263388 C9orf172C9J069 976 aa14.99□□□□□ -0.01
NOTCH3-201ENST00000263388 GPR6P46095 362 aaPredicted RBP14.99□□□□□ -0.01
NOTCH3-201ENST00000263388 CX3CL1P78423 397 aa14.99□□□□□ -0.01
NOTCH3-201ENST00000263388 ZNF414Q96IQ9 312 aa14.99□□□□□ -0.01
NOTCH3-201ENST00000263388 TRBV5-7A0A0A0MS05 114 aa14.99□□□□□ -0.01
NOTCH3-201ENST00000263388 PGPA6NDG6 321 aa14.99□□□□□ -0.01
NOTCH3-201ENST00000263388 C19orf67A6NJJ6 358 aa14.99□□□□□ -0.01
NOTCH3-201ENST00000263388 SUMO2P61956 95 aaKnown RBP14.99□□□□□ -0.01
NOTCH3-201ENST00000263388 EAF1Q96JC9 268 aaPredicted RBP14.99□□□□□ -0.01
NOTCH3-201ENST00000263388 SH3BGRL3Q9H299 93 aa14.99□□□□□ -0.01
NOTCH3-201ENST00000263388 A0A1W2PQF6 199 aa14.99□□□□□ -0.01
NOTCH3-201ENST00000263388 GDF9O60383 454 aa14.99□□□□□ -0.01
NOTCH3-201ENST00000263388 MOSPD3O75425 235 aa14.99□□□□□ -0.01
NOTCH3-201ENST00000263388 SRIP30626 198 aa14.99□□□□□ -0.01
NOTCH3-201ENST00000263388 H2BFSP57053 126 aa14.99□□□□□ -0.01
NOTCH3-201ENST00000263388 SLC22A18ASQ8N1D0 253 aa14.99□□□□□ -0.01
NOTCH3-201ENST00000263388 CGB1A6NKQ9 187 aa14.99□□□□□ -0.01
NOTCH3-201ENST00000263388 IDI2-AS1Q9NZ38 188 aa14.99□□□□□ -0.01
NOTCH3-201ENST00000263388 SNRPD3P62318 126 aaKnown RBP14.99□□□□□ -0.01
NOTCH3-201ENST00000263388 PSMG3Q9BT73 122 aaPredicted RBP14.99□□□□□ -0.01
NOTCH3-201ENST00000263388 PARLQ9H300 379 aa14.99□□□□□ -0.01
NOTCH3-201ENST00000263388 LPAR2Q9HBW0 351 aa14.98□□□□□ -0.01
NOTCH3-201ENST00000263388 RECKO95980 971 aa14.98□□□□□ -0.01
NOTCH3-201ENST00000263388 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.98□□□□□ -0.01
NOTCH3-201ENST00000263388 Q96M66 194 aa14.98□□□□□ -0.01
NOTCH3-201ENST00000263388 CALYQ9NYX4 217 aa14.98□□□□□ -0.01
NOTCH3-201ENST00000263388 TLNRD1Q9H1K6 362 aa14.98□□□□□ -0.01
NOTCH3-201ENST00000263388 NCOA6Q14686 2063 aaPredicted RBP14.98□□□□□ -0.01
NOTCH3-201ENST00000263388 UCP3P55916 312 aa14.98□□□□□ -0.01
NOTCH3-201ENST00000263388 HSPE1P61604 102 aaKnown RBP14.98□□□□□ -0.01
NOTCH3-201ENST00000263388 UNC119Q13432 240 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms