RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 ZNF497Q6ZNH5 498 aa10.82□□□□□ -0.68
SNX1-201ENST00000261889 KCNE4Q8WWG9 221 aa10.82□□□□□ -0.68
SNX1-201ENST00000261889 GALMQ96C23 342 aa10.82□□□□□ -0.68
SNX1-201ENST00000261889 P2RX4Q99571 388 aa10.82□□□□□ -0.68
SNX1-201ENST00000261889 TTTY12Q9BZ98 90 aa10.82□□□□□ -0.68
SNX1-201ENST00000261889 MS4A5Q9H3V2 200 aa10.82□□□□□ -0.68
SNX1-201ENST00000261889 DUXBA0A1W2PPF3 345 aa10.82□□□□□ -0.68
SNX1-201ENST00000261889 K7EN84 100 aa10.82□□□□□ -0.68
SNX1-201ENST00000261889 MMDQ15546 238 aa10.82□□□□□ -0.68
SNX1-201ENST00000261889 PDLIM3Q53GG5 364 aaPredicted RBP10.82□□□□□ -0.68
SNX1-201ENST00000261889 RIPPLY2Q5TAB7 128 aa10.82□□□□□ -0.68
SNX1-201ENST00000261889 PRAMEF5Q5TYX0 476 aa10.82□□□□□ -0.68
SNX1-201ENST00000261889 SFRP2Q96HF1 295 aa10.82□□□□□ -0.68
SNX1-201ENST00000261889 RCHY1Q96PM5 261 aa10.82□□□□□ -0.68
SNX1-201ENST00000261889 UHRF2Q96PU4 802 aa10.82□□□□□ -0.68
SNX1-201ENST00000261889 FOXJ2Q9P0K8 574 aa10.82□□□□□ -0.68
SNX1-201ENST00000261889 SNURFLB1AK76 121 aa10.81□□□□□ -0.68
SNX1-201ENST00000261889 TGOLN2O43493 480 aa10.81□□□□□ -0.68
SNX1-201ENST00000261889 CD59P13987 128 aa10.81□□□□□ -0.68
SNX1-201ENST00000261889 KCNIP4Q6PIL6 250 aa10.81□□□□□ -0.68
SNX1-201ENST00000261889 R3HDM4Q96D70 268 aa10.81□□□□□ -0.68
SNX1-201ENST00000261889 LINC00479Q96M42 142 aa10.81□□□□□ -0.68
SNX1-201ENST00000261889 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.81□□□□□ -0.68
SNX1-201ENST00000261889 GNG12Q9UBI6 72 aa10.81□□□□□ -0.68
SNX1-201ENST00000261889 SPTBN1Q01082 2364 aaKnown RBP10.81□□□□□ -0.68
SNX1-201ENST00000261889 C15orf62A8K5M9 175 aa10.81□□□□□ -0.68
SNX1-201ENST00000261889 PMS2P5A8MQ11 134 aa10.81□□□□□ -0.68
SNX1-201ENST00000261889 TOX3O15405 576 aaPredicted RBP10.81□□□□□ -0.68
SNX1-201ENST00000261889 CD1BP29016 333 aa10.81□□□□□ -0.68
SNX1-201ENST00000261889 RPL31P62899 125 aaKnown RBP10.81□□□□□ -0.68
SNX1-201ENST00000261889 SPRNQ5BIV9 151 aa10.81□□□□□ -0.68
SNX1-201ENST00000261889 COQ2Q96H96 371 aa10.81□□□□□ -0.68
SNX1-201ENST00000261889 WDR54Q9H977 334 aa10.81□□□□□ -0.68
SNX1-201ENST00000261889 KCNIP1Q9NZI2 227 aa10.81□□□□□ -0.68
SNX1-201ENST00000261889 SPTAN1Q13813 2472 aaKnown RBP10.8□□□□□ -0.68
SNX1-201ENST00000261889 J3QT63 122 aa10.8□□□□□ -0.68
SNX1-201ENST00000261889 M0R1X1 148 aa10.8□□□□□ -0.68
SNX1-201ENST00000261889 TCF21O43680 179 aa10.8□□□□□ -0.68
SNX1-201ENST00000261889 CGAP01215 116 aa10.8□□□□□ -0.68
SNX1-201ENST00000261889 MGST1P10620 155 aaKnown RBP10.8□□□□□ -0.68
SNX1-201ENST00000261889 ABHD17BQ5VST6 288 aa10.8□□□□□ -0.68
SNX1-201ENST00000261889 DEFB108BQ8NET1 73 aa10.8□□□□□ -0.68
SNX1-201ENST00000261889 ST6GALNAC6Q969X2 333 aa10.8□□□□□ -0.68
SNX1-201ENST00000261889 NOL4LQ96MY1 436 aaPredicted RBP10.8□□□□□ -0.68
SNX1-201ENST00000261889 MRPL18Q9H0U6 180 aaKnown RBP10.8□□□□□ -0.68
SNX1-201ENST00000261889 NTN3O00634 580 aaPredicted RBP10.8□□□□□ -0.68
SNX1-201ENST00000261889 ACP1P24666 158 aa10.8□□□□□ -0.68
SNX1-201ENST00000261889 ERVFC1-1P60608 527 aa10.8□□□□□ -0.68
SNX1-201ENST00000261889 RPL15P61313 204 aaKnown RBP10.8□□□□□ -0.68
SNX1-201ENST00000261889 PRB3Q04118 309 aaPredicted RBP10.8□□□□□ -0.68
SNX1-201ENST00000261889 RNFT1Q5M7Z0 435 aa10.8□□□□□ -0.68
SNX1-201ENST00000261889 DUX4L9Q6RFH8 374 aaPredicted RBP10.8□□□□□ -0.68
SNX1-201ENST00000261889 PIP4P1Q86T03 277 aa10.8□□□□□ -0.68
SNX1-201ENST00000261889 ZNRF1Q8ND25 227 aa10.8□□□□□ -0.68
SNX1-201ENST00000261889 OR4P4Q8NGL7 312 aa10.8□□□□□ -0.68
SNX1-201ENST00000261889 Q8TCH9 128 aa10.8□□□□□ -0.68
SNX1-201ENST00000261889 LSM10Q969L4 123 aaKnown RBP10.8□□□□□ -0.68
SNX1-201ENST00000261889 PYGO2Q9BRQ0 406 aa10.8□□□□□ -0.68
SNX1-201ENST00000261889 AGMATQ9BSE5 352 aa10.8□□□□□ -0.68
SNX1-201ENST00000261889 HSPB7Q9UBY9 170 aa10.8□□□□□ -0.68
SNX1-201ENST00000261889 DUSP13Q9UII6 198 aa10.8□□□□□ -0.68
SNX1-201ENST00000261889 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.8□□□□□ -0.68
SNX1-201ENST00000261889 GCGP01275 180 aa10.8□□□□□ -0.68
SNX1-201ENST00000261889 APELAP0DMC3 54 aa10.8□□□□□ -0.68
SNX1-201ENST00000261889 ARSJQ5FYB0 599 aaPredicted RBP10.8□□□□□ -0.68
SNX1-201ENST00000261889 OR1L6Q8NGR2 347 aa10.8□□□□□ -0.68
SNX1-201ENST00000261889 MCRIP2Q9BUT9 160 aaKnown RBP10.8□□□□□ -0.68
SNX1-201ENST00000261889 ELOVL5Q9NYP7 299 aa10.8□□□□□ -0.68
SNX1-201ENST00000261889 ZNF391Q9UJN7 358 aa10.8□□□□□ -0.68
SNX1-201ENST00000261889 GGCTO75223 188 aaKnown RBP10.79□□□□□ -0.68
SNX1-201ENST00000261889 CRISP2P16562 243 aa10.79□□□□□ -0.68
SNX1-201ENST00000261889 IL11RAQ14626 422 aa10.79□□□□□ -0.68
SNX1-201ENST00000261889 C1orf229Q6ZS94 237 aaPredicted RBP10.79□□□□□ -0.68
SNX1-201ENST00000261889 PROP1O75360 226 aa10.79□□□□□ -0.68
SNX1-201ENST00000261889 PLAUP00749 431 aa10.79□□□□□ -0.68
SNX1-201ENST00000261889 TCTAP57738 103 aa10.79□□□□□ -0.68
SNX1-201ENST00000261889 TMEM68Q96MH6 324 aa10.79□□□□□ -0.68
SNX1-201ENST00000261889 FBXL7Q9UJT9 491 aa10.79□□□□□ -0.68
SNX1-201ENST00000261889 PXMP4Q9Y6I8 212 aa10.79□□□□□ -0.68
SNX1-201ENST00000261889 CUBNO60494 3623 aa10.79□□□□□ -0.68
SNX1-201ENST00000261889 FOXF2Q12947 444 aa10.79□□□□□ -0.68
SNX1-201ENST00000261889 RNPS1Q15287 305 aaKnown RBP10.79□□□□□ -0.68
SNX1-201ENST00000261889 RNASEH2CQ8TDP1 164 aaKnown RBP10.79□□□□□ -0.68
SNX1-201ENST00000261889 ZCCHC14Q8WYQ9 949 aaKnown RBP10.79□□□□□ -0.68
SNX1-201ENST00000261889 STRADBQ9C0K7 418 aa10.79□□□□□ -0.68
SNX1-201ENST00000261889 ZFHX2Q9C0A1 2572 aaPredicted RBP10.78□□□□□ -0.68
SNX1-201ENST00000261889 TMEM250H0YL14 139 aa10.78□□□□□ -0.68
SNX1-201ENST00000261889 MLNRO43193 412 aa10.78□□□□□ -0.68
SNX1-201ENST00000261889 CRYBB3P26998 211 aa10.78□□□□□ -0.68
SNX1-201ENST00000261889 GNG10P50151 68 aa10.78□□□□□ -0.68
SNX1-201ENST00000261889 SRSF6Q13247 344 aaKnown RBP10.78□□□□□ -0.68
SNX1-201ENST00000261889 MSMO1Q15800 293 aa10.78□□□□□ -0.68
SNX1-201ENST00000261889 PRR27Q6MZM9 219 aa10.78□□□□□ -0.68
SNX1-201ENST00000261889 ZNF645Q8N7E2 425 aa10.78□□□□□ -0.68
SNX1-201ENST00000261889 Q8N7P7 452 aa10.78□□□□□ -0.68
SNX1-201ENST00000261889 MGST2Q99735 147 aa10.78□□□□□ -0.68
SNX1-201ENST00000261889 RTL8AQ9BWD3 113 aa10.78□□□□□ -0.68
SNX1-201ENST00000261889 BOKQ9UMX3 212 aaPredicted RBP10.78□□□□□ -0.68
SNX1-201ENST00000261889 RPH3ALQ9UNE2 315 aa10.78□□□□□ -0.68
SNX1-201ENST00000261889 ACOT6Q3I5F7 207 aaPredicted RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms