RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 OCIAD2Q56VL3 154 aa15.78■□□□□ 0.12
COL4A3BP-201ENST00000261415 ZNF611Q8N823 705 aa15.78■□□□□ 0.12
COL4A3BP-201ENST00000261415 OR5C1Q8NGR4 320 aa15.78■□□□□ 0.12
COL4A3BP-201ENST00000261415 RNF2Q99496 336 aa15.78■□□□□ 0.12
COL4A3BP-201ENST00000261415 BET1LQ9NYM9 111 aa15.78■□□□□ 0.12
COL4A3BP-201ENST00000261415 TRAPPC1Q9Y5R8 145 aa15.78■□□□□ 0.12
COL4A3BP-201ENST00000261415 ARFGEF3Q5TH69 2177 aa15.78■□□□□ 0.12
COL4A3BP-201ENST00000261415 RNF212BA8MTL3 300 aa15.78■□□□□ 0.12
COL4A3BP-201ENST00000261415 SERPINE3A8MV23 424 aa15.78■□□□□ 0.12
COL4A3BP-201ENST00000261415 KBTBD11O94819 623 aa15.78■□□□□ 0.12
COL4A3BP-201ENST00000261415 ESDP10768 282 aa15.78■□□□□ 0.12
COL4A3BP-201ENST00000261415 HNRNPA3P51991 378 aaKnown RBP15.78■□□□□ 0.12
COL4A3BP-201ENST00000261415 SELENOVP59797 346 aa15.78■□□□□ 0.12
COL4A3BP-201ENST00000261415 ADIPOQQ15848 244 aa15.78■□□□□ 0.12
COL4A3BP-201ENST00000261415 ABCA11PQ4W5N1 156 aa15.78■□□□□ 0.12
COL4A3BP-201ENST00000261415 TMEM252Q8N6L7 170 aa15.78■□□□□ 0.12
COL4A3BP-201ENST00000261415 VN1R17PQ8TDU5 208 aa15.78■□□□□ 0.12
COL4A3BP-201ENST00000261415 MBD3L1Q8WWY6 194 aa15.78■□□□□ 0.12
COL4A3BP-201ENST00000261415 RPUSD4Q96CM3 377 aaKnown RBP15.78■□□□□ 0.12
COL4A3BP-201ENST00000261415 ABHD14BQ96IU4 210 aa15.78■□□□□ 0.12
COL4A3BP-201ENST00000261415 SLC2A9Q9NRM0 540 aa15.78■□□□□ 0.12
COL4A3BP-201ENST00000261415 A0A1W2PP11 408 aa15.77■□□□□ 0.12
COL4A3BP-201ENST00000261415 CDS2O95674 445 aa15.77■□□□□ 0.12
COL4A3BP-201ENST00000261415 APOBEC3AP31941 199 aaPredicted RBP15.77■□□□□ 0.12
COL4A3BP-201ENST00000261415 RPL23P62829 140 aaKnown RBP15.77■□□□□ 0.12
COL4A3BP-201ENST00000261415 WDR86Q86TI4 376 aa15.77■□□□□ 0.12
COL4A3BP-201ENST00000261415 NEUROG1Q92886 237 aa15.77■□□□□ 0.12
COL4A3BP-201ENST00000261415 HS3ST6Q96QI5 342 aa15.77■□□□□ 0.12
COL4A3BP-201ENST00000261415 ZNF701Q9NV72 531 aaPredicted RBP15.77■□□□□ 0.12
COL4A3BP-201ENST00000261415 PXMP4Q9Y6I8 212 aa15.77■□□□□ 0.12
COL4A3BP-201ENST00000261415 LOXP28300 417 aaPredicted RBP15.77■□□□□ 0.11
COL4A3BP-201ENST00000261415 RTN4IP1Q8WWV3 396 aaPredicted RBP15.77■□□□□ 0.11
COL4A3BP-201ENST00000261415 TOMM40LQ969M1 308 aa15.77■□□□□ 0.11
COL4A3BP-201ENST00000261415 TXN2Q99757 166 aa15.77■□□□□ 0.11
COL4A3BP-201ENST00000261415 MANBALQ9NQG1 85 aa15.77■□□□□ 0.11
COL4A3BP-201ENST00000261415 TAAR3PQ9P1P4 343 aa15.77■□□□□ 0.11
COL4A3BP-201ENST00000261415 IGKV1-12A0A0C4DH73 117 aa15.76■□□□□ 0.11
COL4A3BP-201ENST00000261415 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.76■□□□□ 0.11
COL4A3BP-201ENST00000261415 CEBPZOSA8MTT3 80 aa15.76■□□□□ 0.11
COL4A3BP-201ENST00000261415 E7EQL1 145 aa15.76■□□□□ 0.11
COL4A3BP-201ENST00000261415 PLAUP00749 431 aa15.76■□□□□ 0.11
COL4A3BP-201ENST00000261415 IGKV1D-12P01611 117 aa15.76■□□□□ 0.11
COL4A3BP-201ENST00000261415 RPL15P61313 204 aaKnown RBP15.76■□□□□ 0.11
COL4A3BP-201ENST00000261415 SUMO1P63165 101 aaKnown RBP15.76■□□□□ 0.11
COL4A3BP-201ENST00000261415 SP6Q3SY56 376 aa15.76■□□□□ 0.11
COL4A3BP-201ENST00000261415 ASCL4Q6XD76 172 aa15.76■□□□□ 0.11
COL4A3BP-201ENST00000261415 FAM89BQ8N5H3 189 aa15.76■□□□□ 0.11
COL4A3BP-201ENST00000261415 Q8NFD4 153 aa15.76■□□□□ 0.11
COL4A3BP-201ENST00000261415 CST9LQ9H4G1 147 aa15.76■□□□□ 0.11
COL4A3BP-201ENST00000261415 ZNF665Q9H7R5 613 aa15.76■□□□□ 0.11
COL4A3BP-201ENST00000261415 ZNF581Q9P0T4 197 aa15.76■□□□□ 0.11
COL4A3BP-201ENST00000261415 RBM7Q9Y580 266 aaKnown RBP15.76■□□□□ 0.11
COL4A3BP-201ENST00000261415 LRBAP50851 2863 aa15.76■□□□□ 0.11
COL4A3BP-201ENST00000261415 IGFBP2P18065 325 aa15.75■□□□□ 0.11
COL4A3BP-201ENST00000261415 TNFSF4P23510 183 aa15.75■□□□□ 0.11
COL4A3BP-201ENST00000261415 OR5AU1Q8NGC0 362 aa15.75■□□□□ 0.11
COL4A3BP-201ENST00000261415 BANF2Q9H503 90 aa15.75■□□□□ 0.11
COL4A3BP-201ENST00000261415 M0QZ24 198 aa15.75■□□□□ 0.11
COL4A3BP-201ENST00000261415 NUPR1O60356 82 aa15.75■□□□□ 0.11
COL4A3BP-201ENST00000261415 OMGP23515 440 aa15.75■□□□□ 0.11
COL4A3BP-201ENST00000261415 CTRLP40313 264 aa15.75■□□□□ 0.11
COL4A3BP-201ENST00000261415 DYNLT3P51808 116 aa15.75■□□□□ 0.11
COL4A3BP-201ENST00000261415 ARF6P62330 175 aa15.75■□□□□ 0.11
COL4A3BP-201ENST00000261415 Q6ZN92 141 aa15.75■□□□□ 0.11
COL4A3BP-201ENST00000261415 ATP5SQ99766 215 aa15.75■□□□□ 0.11
COL4A3BP-201ENST00000261415 TMEM204Q9BSN7 226 aa15.75■□□□□ 0.11
COL4A3BP-201ENST00000261415 PPIAL4AQ9Y536 164 aa15.75■□□□□ 0.11
COL4A3BP-201ENST00000261415 COL12A1Q99715 3063 aa15.75■□□□□ 0.11
COL4A3BP-201ENST00000261415 DUXBA0A1W2PPF3 345 aa15.74■□□□□ 0.11
COL4A3BP-201ENST00000261415 LRP5LA4QPB2 252 aa15.74■□□□□ 0.11
COL4A3BP-201ENST00000261415 K7ERU9 68 aa15.74■□□□□ 0.11
COL4A3BP-201ENST00000261415 NKX2-1P43699 371 aaPredicted RBP15.74■□□□□ 0.11
COL4A3BP-201ENST00000261415 RUNX1Q01196 453 aa15.74■□□□□ 0.11
COL4A3BP-201ENST00000261415 ZNF154Q13106 437 aa15.74■□□□□ 0.11
COL4A3BP-201ENST00000261415 KLHDC1Q8N7A1 406 aa15.74■□□□□ 0.11
COL4A3BP-201ENST00000261415 ZNF709Q8N972 641 aa15.74■□□□□ 0.11
COL4A3BP-201ENST00000261415 OR2Z1Q8NG97 314 aa15.74■□□□□ 0.11
COL4A3BP-201ENST00000261415 MSI2Q96DH6 328 aaKnown RBP15.74■□□□□ 0.11
COL4A3BP-201ENST00000261415 CXXC4Q9H2H0 198 aa15.74■□□□□ 0.11
COL4A3BP-201ENST00000261415 CDC42EP3Q9UKI2 254 aa15.74■□□□□ 0.11
COL4A3BP-201ENST00000261415 VSTM5A8MXK1 200 aa15.74■□□□□ 0.11
COL4A3BP-201ENST00000261415 TMEM250H0YL14 139 aa15.74■□□□□ 0.11
COL4A3BP-201ENST00000261415 NBEAP1P0C6P0 100 aa15.74■□□□□ 0.11
COL4A3BP-201ENST00000261415 ZNF728P0DKX0 622 aa15.74■□□□□ 0.11
COL4A3BP-201ENST00000261415 OR51T1Q8NGJ9 327 aa15.74■□□□□ 0.11
COL4A3BP-201ENST00000261415 HSPB9Q9BQS6 159 aa15.74■□□□□ 0.11
COL4A3BP-201ENST00000261415 PKIBQ9C010 78 aa15.74■□□□□ 0.11
COL4A3BP-201ENST00000261415 IL36GQ9NZH8 169 aa15.74■□□□□ 0.11
COL4A3BP-201ENST00000261415 MRPS16Q9Y3D3 137 aaKnown RBP15.74■□□□□ 0.11
COL4A3BP-201ENST00000261415 IGHV3-64DA0A0J9YX35 117 aa15.73■□□□□ 0.11
COL4A3BP-201ENST00000261415 SYNGR1O43759 233 aa15.73■□□□□ 0.11
COL4A3BP-201ENST00000261415 SAXO1Q8IYX7 474 aa15.73■□□□□ 0.11
COL4A3BP-201ENST00000261415 SCCPDHQ8NBX0 429 aa15.73■□□□□ 0.11
COL4A3BP-201ENST00000261415 FAM222BQ8WU58 562 aa15.73■□□□□ 0.11
COL4A3BP-201ENST00000261415 SPIN2AQ99865 258 aa15.73■□□□□ 0.11
COL4A3BP-201ENST00000261415 SPIN2BQ9BPZ2 258 aa15.73■□□□□ 0.11
COL4A3BP-201ENST00000261415 DYSFO75923 2080 aa15.73■□□□□ 0.11
COL4A3BP-201ENST00000261415 J3QT63 122 aa15.73■□□□□ 0.11
COL4A3BP-201ENST00000261415 IFNA5P01569 189 aa15.73■□□□□ 0.11
COL4A3BP-201ENST00000261415 GRPP07492 148 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms