RNA–Protein interactions for RNA: ENST00000261367.11

SNCAIP-201, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-201ENST00000261367 GNB4Q9HAV0 340 aa7.13□□□□□ -1.27
SNCAIP-201ENST00000261367 FGF21Q9NSA1 209 aa7.13□□□□□ -1.27
SNCAIP-201ENST00000261367 HIGD1AQ9Y241 93 aa7.13□□□□□ -1.27
SNCAIP-201ENST00000261367 PPIAL4AQ9Y536 164 aa7.13□□□□□ -1.27
SNCAIP-201ENST00000261367 TMEM8BA6NDV4 472 aa7.12□□□□□ -1.27
SNCAIP-201ENST00000261367 TMPRSS2O15393 492 aa7.12□□□□□ -1.27
SNCAIP-201ENST00000261367 HOXA3O43365 443 aaPredicted RBP7.12□□□□□ -1.27
SNCAIP-201ENST00000261367 GABRG2P18507 467 aa7.12□□□□□ -1.27
SNCAIP-201ENST00000261367 PIGYQ3MUY2 71 aa7.12□□□□□ -1.27
SNCAIP-201ENST00000261367 HDHD3Q9BSH5 251 aaPredicted RBP7.12□□□□□ -1.27
SNCAIP-201ENST00000261367 RNF186Q9NXI6 227 aa7.12□□□□□ -1.27
SNCAIP-201ENST00000261367 F11RQ9Y624 299 aaKnown RBP7.12□□□□□ -1.27
SNCAIP-201ENST00000261367 TRAV38-1A0A0B4J264 116 aa7.12□□□□□ -1.27
SNCAIP-201ENST00000261367 TIAF1O95411 115 aa7.12□□□□□ -1.27
SNCAIP-201ENST00000261367 NTN1O95631 604 aa7.12□□□□□ -1.27
SNCAIP-201ENST00000261367 C3orf79P0CE67 100 aa7.12□□□□□ -1.27
SNCAIP-201ENST00000261367 LGALS3P17931 250 aaKnown RBP7.12□□□□□ -1.27
SNCAIP-201ENST00000261367 MEOX1P50221 254 aa7.12□□□□□ -1.27
SNCAIP-201ENST00000261367 PDLIM4P50479 330 aa7.12□□□□□ -1.27
SNCAIP-201ENST00000261367 RNPS1Q15287 305 aaKnown RBP7.12□□□□□ -1.27
SNCAIP-201ENST00000261367 OR1K1Q8NGR3 316 aa7.12□□□□□ -1.27
SNCAIP-201ENST00000261367 C6orf106Q9H6K1 298 aaPredicted RBP7.12□□□□□ -1.27
SNCAIP-201ENST00000261367 ZDBF2Q9HCK1 2354 aa7.12□□□□□ -1.27
SNCAIP-201ENST00000261367 CA6P23280 308 aa7.12□□□□□ -1.27
SNCAIP-201ENST00000261367 CD38P28907 300 aa7.12□□□□□ -1.27
SNCAIP-201ENST00000261367 YPEL3P61236 119 aaPredicted RBP7.12□□□□□ -1.27
SNCAIP-201ENST00000261367 FAM27BQ5VT28 67 aa7.12□□□□□ -1.27
SNCAIP-201ENST00000261367 MORN3Q6PF18 240 aaPredicted RBP7.12□□□□□ -1.27
SNCAIP-201ENST00000261367 SLC25A47Q6Q0C1 308 aa7.12□□□□□ -1.27
SNCAIP-201ENST00000261367 LINC00114Q6XXX2 140 aa7.12□□□□□ -1.27
SNCAIP-201ENST00000261367 SVIPQ8NHG7 77 aa7.12□□□□□ -1.27
SNCAIP-201ENST00000261367 PGLYRP4Q96LB8 373 aa7.12□□□□□ -1.27
SNCAIP-201ENST00000261367 MYO9BQ13459 2157 aa7.12□□□□□ -1.27
SNCAIP-201ENST00000261367 A0A1W2PRE2 83 aa7.12□□□□□ -1.27
SNCAIP-201ENST00000261367 KLRC4-KLRK1H3BQV0 150 aa7.12□□□□□ -1.27
SNCAIP-201ENST00000261367 APOHP02749 345 aaPredicted RBP7.12□□□□□ -1.27
SNCAIP-201ENST00000261367 CEACAM21Q3KPI0 293 aa7.12□□□□□ -1.27
SNCAIP-201ENST00000261367 MPV17L2Q567V2 206 aa7.12□□□□□ -1.27
SNCAIP-201ENST00000261367 WBP2Q969T9 261 aa7.12□□□□□ -1.27
SNCAIP-201ENST00000261367 A0A1B0GUT8 65 aa7.11□□□□□ -1.27
SNCAIP-201ENST00000261367 ATXN7O15265 892 aaPredicted RBP7.11□□□□□ -1.27
SNCAIP-201ENST00000261367 LHX2P50458 406 aa7.11□□□□□ -1.27
SNCAIP-201ENST00000261367 HOXA4Q00056 320 aaPredicted RBP7.11□□□□□ -1.27
SNCAIP-201ENST00000261367 ZNF146Q15072 292 aa7.11□□□□□ -1.27
SNCAIP-201ENST00000261367 PMVKQ15126 192 aa7.11□□□□□ -1.27
SNCAIP-201ENST00000261367 C9orf50Q5SZB4 431 aa7.11□□□□□ -1.27
SNCAIP-201ENST00000261367 MIC13Q5XKP0 118 aa7.11□□□□□ -1.27
SNCAIP-201ENST00000261367 FAM90A2PQ658T7 463 aa7.11□□□□□ -1.27
SNCAIP-201ENST00000261367 DLX4Q92988 240 aaPredicted RBP7.11□□□□□ -1.27
SNCAIP-201ENST00000261367 GFI1Q99684 422 aa7.11□□□□□ -1.27
SNCAIP-201ENST00000261367 PIKFYVEQ9Y2I7 2098 aa7.11□□□□□ -1.27
SNCAIP-201ENST00000261367 SIVA1O15304 175 aa7.11□□□□□ -1.27
SNCAIP-201ENST00000261367 GNB2P62879 340 aa7.11□□□□□ -1.27
SNCAIP-201ENST00000261367 FXYD3Q14802 87 aa7.11□□□□□ -1.27
SNCAIP-201ENST00000261367 ADIPOQQ15848 244 aa7.11□□□□□ -1.27
SNCAIP-201ENST00000261367 ASPHD2Q6ICH7 369 aa7.11□□□□□ -1.27
SNCAIP-201ENST00000261367 ZNF818PQ6ZRF7 136 aa7.11□□□□□ -1.27
SNCAIP-201ENST00000261367 LOC105371242A0A075B767 164 aa7.11□□□□□ -1.27
SNCAIP-201ENST00000261367 PPIAL4CA0A0B4J2A2 164 aa7.11□□□□□ -1.27
SNCAIP-201ENST00000261367 A0A1W2PP11 408 aa7.11□□□□□ -1.27
SNCAIP-201ENST00000261367 A0A1W2PQM1 296 aa7.11□□□□□ -1.27
SNCAIP-201ENST00000261367 A6NCN8 305 aa7.11□□□□□ -1.27
SNCAIP-201ENST00000261367 PRRT4C9JH25 899 aa7.11□□□□□ -1.27
SNCAIP-201ENST00000261367 HBDP02042 147 aa7.11□□□□□ -1.27
SNCAIP-201ENST00000261367 PPIAL4GP0DN37 164 aa7.11□□□□□ -1.27
SNCAIP-201ENST00000261367 IL11P20809 199 aa7.11□□□□□ -1.27
SNCAIP-201ENST00000261367 CYB561P49447 251 aa7.11□□□□□ -1.27
SNCAIP-201ENST00000261367 MRPS11P82912 194 aaKnown RBP7.11□□□□□ -1.27
SNCAIP-201ENST00000261367 PSG9Q00887 426 aa7.11□□□□□ -1.27
SNCAIP-201ENST00000261367 CBLN3Q6UW01 205 aa7.11□□□□□ -1.27
SNCAIP-201ENST00000261367 ZNF788Q6ZQV5 615 aa7.11□□□□□ -1.27
SNCAIP-201ENST00000261367 ZNF296Q8WUU4 475 aaPredicted RBP7.11□□□□□ -1.27
SNCAIP-201ENST00000261367 DNASE2BQ8WZ79 361 aa7.11□□□□□ -1.27
SNCAIP-201ENST00000261367 MRPS18CQ9Y3D5 142 aaKnown RBP7.11□□□□□ -1.27
SNCAIP-201ENST00000261367 hADV38S2A0JD32 116 aa7.11□□□□□ -1.27
SNCAIP-201ENST00000261367 ZNF785A8K8V0 405 aa7.11□□□□□ -1.27
SNCAIP-201ENST00000261367 GAGE5Q13069 117 aa7.11□□□□□ -1.27
SNCAIP-201ENST00000261367 GAGE6Q13070 117 aa7.11□□□□□ -1.27
SNCAIP-201ENST00000261367 FHL5Q5TD97 284 aa7.11□□□□□ -1.27
SNCAIP-201ENST00000261367 MRPL43Q8N983 215 aaKnown RBP7.11□□□□□ -1.27
SNCAIP-201ENST00000261367 FGF11Q92914 225 aa7.11□□□□□ -1.27
SNCAIP-201ENST00000261367 AMELYQ99218 206 aa7.11□□□□□ -1.27
SNCAIP-201ENST00000261367 OR2H1Q9GZK4 316 aa7.11□□□□□ -1.27
SNCAIP-201ENST00000261367 VPS13AQ96RL7 3174 aa7.11□□□□□ -1.27
SNCAIP-201ENST00000261367 CHD9Q3L8U1 2897 aa7.11□□□□□ -1.27
SNCAIP-201ENST00000261367 SPTBN2O15020 2390 aa7.1□□□□□ -1.27
SNCAIP-201ENST00000261367 MS4A18H0YCH9 400 aa7.1□□□□□ -1.27
SNCAIP-201ENST00000261367 ORM2P19652 201 aa7.1□□□□□ -1.27
SNCAIP-201ENST00000261367 RAC3P60763 192 aa7.1□□□□□ -1.27
SNCAIP-201ENST00000261367 HSPE1P61604 102 aaKnown RBP7.1□□□□□ -1.27
SNCAIP-201ENST00000261367 TRA2AQ13595 282 aaKnown RBP eCLIP7.1□□□□□ -1.27
SNCAIP-201ENST00000261367 COL9A2Q14055 689 aaPredicted RBP7.1□□□□□ -1.27
SNCAIP-201ENST00000261367 MS4A18Q3C1V0 323 aa7.1□□□□□ -1.27
SNCAIP-201ENST00000261367 FAM19A2Q8N3H0 131 aa7.1□□□□□ -1.27
SNCAIP-201ENST00000261367 TSKUQ8WUA8 353 aa7.1□□□□□ -1.27
SNCAIP-201ENST00000261367 ARPC1AQ92747 370 aa7.1□□□□□ -1.27
SNCAIP-201ENST00000261367 PRELID3AQ96N28 172 aa7.1□□□□□ -1.27
SNCAIP-201ENST00000261367 WFDC6Q9BQY6 131 aa7.1□□□□□ -1.27
SNCAIP-201ENST00000261367 MORN2Q502X0 79 aa7.1□□□□□ -1.27
SNCAIP-201ENST00000261367 FAM166AQ6J272 317 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms