RNA–Protein interactions for RNA: ENST00000261303.12

PSMC1-201, Transcript of proteasome 26S subunit, ATPase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMC1, Length 4,448 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC1-201ENST00000261303 FAM216BQ8N7L0 139 aa11.89□□□□□ -0.51
PSMC1-201ENST00000261303 MIOXQ9UGB7 285 aa11.89□□□□□ -0.51
PSMC1-201ENST00000261303 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.89□□□□□ -0.516e-7■■■■■ 32.1
PSMC1-201ENST00000261303 PLAUP00749 431 aa11.89□□□□□ -0.51
PSMC1-201ENST00000261303 HNRNPA3P51991 378 aaKnown RBP11.89□□□□□ -0.51
PSMC1-201ENST00000261303 Q0VFX4 171 aa11.89□□□□□ -0.51
PSMC1-201ENST00000261303 ZNF788Q6ZQV5 615 aa11.89□□□□□ -0.51
PSMC1-201ENST00000261303 LHFPL1Q86WI0 220 aa11.89□□□□□ -0.51
PSMC1-201ENST00000261303 FAM90A1Q86YD7 464 aa11.89□□□□□ -0.51
PSMC1-201ENST00000261303 DNAJC4Q9NNZ3 241 aa11.89□□□□□ -0.51
PSMC1-201ENST00000261303 TMEM106BQ9NUM4 274 aa11.89□□□□□ -0.51
PSMC1-201ENST00000261303 RALYQ9UKM9 306 aaKnown RBP11.89□□□□□ -0.51
PSMC1-201ENST00000261303 PCNX2A6NKB5 2137 aa11.89□□□□□ -0.51
PSMC1-201ENST00000261303 E9PQ18 207 aa11.89□□□□□ -0.51
PSMC1-201ENST00000261303 TRGC2P03986 189 aa11.89□□□□□ -0.51
PSMC1-201ENST00000261303 C8orf88P0DMB2 117 aa11.89□□□□□ -0.51
PSMC1-201ENST00000261303 APOBEC3AP31941 199 aaPredicted RBP11.89□□□□□ -0.51
PSMC1-201ENST00000261303 MFAP2P55001 183 aa11.89□□□□□ -0.51
PSMC1-201ENST00000261303 HIST3H3Q16695 136 aa11.89□□□□□ -0.51
PSMC1-201ENST00000261303 PNRC2Q9NPJ4 139 aaKnown RBP11.89□□□□□ -0.51
PSMC1-201ENST00000261303 TRAV24A0A0B4J272 114 aa11.88□□□□□ -0.51
PSMC1-201ENST00000261303 CXorf65A6NEN9 183 aa11.88□□□□□ -0.51
PSMC1-201ENST00000261303 TMEM250H0YL14 139 aa11.88□□□□□ -0.51
PSMC1-201ENST00000261303 CSN3P07498 182 aa11.88□□□□□ -0.51
PSMC1-201ENST00000261303 RIGQ13278 110 aa11.88□□□□□ -0.51
PSMC1-201ENST00000261303 OR5R1Q8NH85 324 aa11.88□□□□□ -0.51
PSMC1-201ENST00000261303 CLEC7AQ9BXN2 247 aa11.88□□□□□ -0.51
PSMC1-201ENST00000261303 NHLRC2Q8NBF2 726 aa11.88□□□□□ -0.51
PSMC1-201ENST00000261303 SHANK1Q9Y566 2161 aa11.88□□□□□ -0.51
PSMC1-201ENST00000261303 USF3Q68DE3 2245 aa11.88□□□□□ -0.51
PSMC1-201ENST00000261303 KLRB1Q12918 225 aa11.88□□□□□ -0.51
PSMC1-201ENST00000261303 LINC01560Q8TB33 94 aa11.88□□□□□ -0.51
PSMC1-201ENST00000261303 KBTBD11-OT1A0A1B0GTJ5 212 aa11.87□□□□□ -0.51
PSMC1-201ENST00000261303 TM4SF5O14894 197 aa11.87□□□□□ -0.51
PSMC1-201ENST00000261303 LIPFP07098 398 aa11.87□□□□□ -0.51
PSMC1-201ENST00000261303 ARL14EPLP0DKL9 152 aa11.87□□□□□ -0.51
PSMC1-201ENST00000261303 RPL29P47914 159 aaKnown RBP11.87□□□□□ -0.51
PSMC1-201ENST00000261303 OR2D3Q8NGH3 330 aa11.87□□□□□ -0.51
PSMC1-201ENST00000261303 OSR1Q8TAX0 266 aaPredicted RBP11.87□□□□□ -0.51
PSMC1-201ENST00000261303 PLXNA4Q9HCM2 1894 aa11.87□□□□□ -0.51
PSMC1-201ENST00000261303 ISLRO14498 428 aa11.87□□□□□ -0.51
PSMC1-201ENST00000261303 FAM87AP0C7U9 286 aa11.87□□□□□ -0.51
PSMC1-201ENST00000261303 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.87□□□□□ -0.51
PSMC1-201ENST00000261303 CARHSP1Q9Y2V2 147 aaKnown RBP11.87□□□□□ -0.51
PSMC1-201ENST00000261303 FANCMQ8IYD8 2048 aa11.87□□□□□ -0.51
PSMC1-201ENST00000261303 ZFHX2Q9C0A1 2572 aaPredicted RBP11.87□□□□□ -0.51
PSMC1-201ENST00000261303 C5orf63A6NC05 138 aa11.87□□□□□ -0.51
PSMC1-201ENST00000261303 A8MWL6 223 aa11.87□□□□□ -0.51
PSMC1-201ENST00000261303 OTX1P32242 354 aaPredicted RBP11.87□□□□□ -0.51
PSMC1-201ENST00000261303 ZNF506Q5JVG8 444 aa11.87□□□□□ -0.51
PSMC1-201ENST00000261303 DNM1P46Q6ZS02 220 aa11.87□□□□□ -0.51
PSMC1-201ENST00000261303 LRP11Q86VZ4 500 aa11.87□□□□□ -0.51
PSMC1-201ENST00000261303 OR4A5Q8NH83 315 aa11.87□□□□□ -0.51
PSMC1-201ENST00000261303 GATAD1Q8WUU5 269 aa11.87□□□□□ -0.51
PSMC1-201ENST00000261303 NABP2Q9BQ15 211 aa11.87□□□□□ -0.51
PSMC1-201ENST00000261303 PARLQ9H300 379 aa11.87□□□□□ -0.51
PSMC1-201ENST00000261303 CLEC5AQ9NY25 188 aa11.87□□□□□ -0.51
PSMC1-201ENST00000261303 NAGKQ9UJ70 344 aa11.87□□□□□ -0.51
PSMC1-201ENST00000261303 KCNMB2Q9Y691 235 aa11.87□□□□□ -0.51
PSMC1-201ENST00000261303 OR2J3O76001 311 aa11.87□□□□□ -0.51
PSMC1-201ENST00000261303 ORM1P02763 201 aa11.87□□□□□ -0.51
PSMC1-201ENST00000261303 FAM106CPP0CH98 169 aa11.87□□□□□ -0.51
PSMC1-201ENST00000261303 LRRC75BQ2VPJ9 315 aa11.87□□□□□ -0.51
PSMC1-201ENST00000261303 CLEC2AQ6UVW9 174 aa11.87□□□□□ -0.51
PSMC1-201ENST00000261303 EIF4E3Q8N5X7 224 aaKnown RBP11.87□□□□□ -0.51
PSMC1-201ENST00000261303 C19orf24Q9BVV8 132 aa11.87□□□□□ -0.51
PSMC1-201ENST00000261303 SCN8AQ9UQD0 1980 aa11.86□□□□□ -0.51
PSMC1-201ENST00000261303 DNASE2O00115 360 aaPredicted RBP11.86□□□□□ -0.51
PSMC1-201ENST00000261303 SRP14P37108 136 aaKnown RBP11.86□□□□□ -0.51
PSMC1-201ENST00000261303 BSPH1Q075Z2 132 aa11.86□□□□□ -0.51
PSMC1-201ENST00000261303 WDR82Q6UXN9 313 aa11.86□□□□□ -0.51
PSMC1-201ENST00000261303 BPIFA4PQ86YQ2 179 aa11.86□□□□□ -0.51
PSMC1-201ENST00000261303 PGPA6NDG6 321 aa11.86□□□□□ -0.51
PSMC1-201ENST00000261303 OR5AL1P0C617 328 aa11.86□□□□□ -0.51
PSMC1-201ENST00000261303 BIVMQ86UB2 503 aa11.86□□□□□ -0.51
PSMC1-201ENST00000261303 NPIPB3Q92617 1050 aa11.86□□□□□ -0.51
PSMC1-201ENST00000261303 DPF1Q92782 380 aa11.86□□□□□ -0.51
PSMC1-201ENST00000261303 SPSB4Q96A44 273 aa11.86□□□□□ -0.51
PSMC1-201ENST00000261303 C18orf12Q96KH6 178 aa11.86□□□□□ -0.51
PSMC1-201ENST00000261303 C17orf100A8MU93 164 aa11.86□□□□□ -0.51
PSMC1-201ENST00000261303 M0R2Z0 102 aa11.86□□□□□ -0.51
PSMC1-201ENST00000261303 NHLH1Q02575 133 aa11.86□□□□□ -0.51
PSMC1-201ENST00000261303 ZNF497Q6ZNH5 498 aa11.86□□□□□ -0.51
PSMC1-201ENST00000261303 C11orf42Q8N5U0 333 aa11.86□□□□□ -0.51
PSMC1-201ENST00000261303 IGKV1-27A0A075B6S5 117 aa11.85□□□□□ -0.51
PSMC1-201ENST00000261303 CA2P00918 260 aa11.85□□□□□ -0.51
PSMC1-201ENST00000261303 MT-ND6P03923 174 aa11.85□□□□□ -0.51
PSMC1-201ENST00000261303 ID3Q02535 119 aa11.85□□□□□ -0.51
PSMC1-201ENST00000261303 WDFY1Q8IWB7 410 aa11.85□□□□□ -0.51
PSMC1-201ENST00000261303 OR51G1Q8NGK1 321 aa11.85□□□□□ -0.51
PSMC1-201ENST00000261303 IBA57Q5T440 356 aaKnown RBP11.85□□□□□ -0.51
PSMC1-201ENST00000261303 STPG3Q8N7X2 389 aa11.85□□□□□ -0.51
PSMC1-201ENST00000261303 SNRNP40Q96DI7 357 aaKnown RBP11.85□□□□□ -0.51
PSMC1-201ENST00000261303 NOTCH3Q9UM47 2321 aa11.85□□□□□ -0.51
PSMC1-201ENST00000261303 IGKV3-7A0A075B6H7 116 aa11.85□□□□□ -0.51
PSMC1-201ENST00000261303 B3GALT5-AS1P59052 145 aa11.85□□□□□ -0.51
PSMC1-201ENST00000261303 SLC35B1P78383 322 aa11.85□□□□□ -0.51
PSMC1-201ENST00000261303 LRTM2Q8N967 370 aa11.85□□□□□ -0.51
PSMC1-201ENST00000261303 WDR31Q8NA23 367 aa11.85□□□□□ -0.51
PSMC1-201ENST00000261303 NPCDR1Q9BY65 106 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms