RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 ERVK-16P61578 105 aa12.61□□□□□ -0.39
DDX56-201ENST00000258772 P2RY6Q15077 328 aa12.61□□□□□ -0.39
DDX56-201ENST00000258772 PDLIM3Q53GG5 364 aaPredicted RBP12.61□□□□□ -0.39
DDX56-201ENST00000258772 ZNRF1Q8ND25 227 aa12.61□□□□□ -0.39
DDX56-201ENST00000258772 RNASEH2CQ8TDP1 164 aaKnown RBP12.61□□□□□ -0.39
DDX56-201ENST00000258772 S1PR3Q99500 378 aa12.61□□□□□ -0.39
DDX56-201ENST00000258772 KCNIP2Q9NS61 270 aa12.61□□□□□ -0.39
DDX56-201ENST00000258772 DKK4Q9UBT3 224 aa12.61□□□□□ -0.39
DDX56-201ENST00000258772 PROCRQ9UNN8 238 aa12.61□□□□□ -0.39
DDX56-201ENST00000258772 DSPP15924 2871 aaKnown RBP12.6□□□□□ -0.39
DDX56-201ENST00000258772 IGHV3OR15-7A0A075B7D8 119 aa12.6□□□□□ -0.39
DDX56-201ENST00000258772 DVL1O14640 695 aa12.6□□□□□ -0.39
DDX56-201ENST00000258772 NDUFB4O95168 129 aa12.6□□□□□ -0.39
DDX56-201ENST00000258772 GPX4P36969 197 aaPredicted RBP12.6□□□□□ -0.39
DDX56-201ENST00000258772 NUBP1P53384 320 aa12.6□□□□□ -0.39
DDX56-201ENST00000258772 ACTL10Q5JWF8 245 aa12.6□□□□□ -0.39
DDX56-201ENST00000258772 ABHD12Q8N2K0 398 aa12.6□□□□□ -0.39
DDX56-201ENST00000258772 TMEM37Q8WXS4 190 aa12.6□□□□□ -0.39
DDX56-201ENST00000258772 ACY3Q96HD9 319 aa12.6□□□□□ -0.39
DDX56-201ENST00000258772 MGST2Q99735 147 aa12.6□□□□□ -0.39
DDX56-201ENST00000258772 IFI27L2Q9H2X8 130 aa12.6□□□□□ -0.39
DDX56-201ENST00000258772 MS4A5Q9H3V2 200 aa12.6□□□□□ -0.39
DDX56-201ENST00000258772 SLC25A15Q9Y619 301 aa12.6□□□□□ -0.39
DDX56-201ENST00000258772 DSCAMO60469 2012 aa12.6□□□□□ -0.39
DDX56-201ENST00000258772 AHRRA9YTQ3 701 aa12.6□□□□□ -0.39
DDX56-201ENST00000258772 PKIAP61925 76 aa12.6□□□□□ -0.39
DDX56-201ENST00000258772 JOSD1Q15040 202 aaPredicted RBP12.6□□□□□ -0.39
DDX56-201ENST00000258772 SPRNQ5BIV9 151 aa12.6□□□□□ -0.39
DDX56-201ENST00000258772 KCNIP4Q6PIL6 250 aa12.6□□□□□ -0.39
DDX56-201ENST00000258772 CISD2Q8N5K1 135 aaKnown RBP12.6□□□□□ -0.39
DDX56-201ENST00000258772 FAM169BQ8N8A8 192 aa12.6□□□□□ -0.39
DDX56-201ENST00000258772 OR5R1Q8NH85 324 aa12.6□□□□□ -0.39
DDX56-201ENST00000258772 DERL1Q9BUN8 251 aa12.6□□□□□ -0.39
DDX56-201ENST00000258772 TMEM140Q9NV12 185 aa12.6□□□□□ -0.39
DDX56-201ENST00000258772 AURKAIP1Q9NWT8 199 aaPredicted RBP12.6□□□□□ -0.39
DDX56-201ENST00000258772 FUT9Q9Y231 359 aa12.6□□□□□ -0.39
DDX56-201ENST00000258772 BDP1A6H8Y1 2624 aa12.6□□□□□ -0.39
DDX56-201ENST00000258772 CD99P14209 185 aa12.59□□□□□ -0.39
DDX56-201ENST00000258772 PDLIM4P50479 330 aa12.59□□□□□ -0.39
DDX56-201ENST00000258772 MIC13Q5XKP0 118 aa12.59□□□□□ -0.39
DDX56-201ENST00000258772 C1orf229Q6ZS94 237 aaPredicted RBP12.59□□□□□ -0.39
DDX56-201ENST00000258772 DSCAML1Q8TD84 2053 aa12.59□□□□□ -0.39
DDX56-201ENST00000258772 F6UZH7 168 aa12.59□□□□□ -0.39
DDX56-201ENST00000258772 STAG3L2P0CL84 134 aa12.59□□□□□ -0.39
DDX56-201ENST00000258772 STAG3L3P0CL85 134 aa12.59□□□□□ -0.39
DDX56-201ENST00000258772 WT1P19544 449 aaPredicted RBP12.59□□□□□ -0.39
DDX56-201ENST00000258772 LCN2P80188 198 aa12.59□□□□□ -0.39
DDX56-201ENST00000258772 DDB2Q92466 427 aa12.59□□□□□ -0.39
DDX56-201ENST00000258772 OR2V2Q96R30 315 aa12.59□□□□□ -0.39
DDX56-201ENST00000258772 GGTLC1Q9BX51 225 aa12.59□□□□□ -0.39
DDX56-201ENST00000258772 TCF19Q9Y242 345 aa12.59□□□□□ -0.39
DDX56-201ENST00000258772 PXMP4Q9Y6I8 212 aa12.59□□□□□ -0.39
DDX56-201ENST00000258772 SLC31A2O15432 143 aa12.58□□□□□ -0.4
DDX56-201ENST00000258772 ARL14EPLP0DKL9 152 aa12.58□□□□□ -0.4
DDX56-201ENST00000258772 KIR2DS2P43631 304 aa12.58□□□□□ -0.4
DDX56-201ENST00000258772 UTF1Q5T230 341 aa12.58□□□□□ -0.4
DDX56-201ENST00000258772 FAM78BQ5VT40 261 aa12.58□□□□□ -0.4
DDX56-201ENST00000258772 SDSLQ96GA7 329 aa12.58□□□□□ -0.4
DDX56-201ENST00000258772 RHOVQ96L33 236 aa12.58□□□□□ -0.4
DDX56-201ENST00000258772 TXNDC17Q9BRA2 123 aa12.58□□□□□ -0.4
DDX56-201ENST00000258772 ICE1Q9Y2F5 2266 aa12.58□□□□□ -0.4
DDX56-201ENST00000258772 CGB3P0DN86 165 aa12.57□□□□□ -0.4
DDX56-201ENST00000258772 CGB7P0DN87 165 aa12.57□□□□□ -0.4
DDX56-201ENST00000258772 GZMBP10144 247 aa12.57□□□□□ -0.4
DDX56-201ENST00000258772 MOGAT3Q86VF5 341 aa12.57□□□□□ -0.4
DDX56-201ENST00000258772 C1orf159Q96HA4 380 aa12.57□□□□□ -0.4
DDX56-201ENST00000258772 C14orf144Q96I85 54 aa12.57□□□□□ -0.4
DDX56-201ENST00000258772 PRO1933Q9H354 126 aa12.57□□□□□ -0.4
DDX56-201ENST00000258772 NPVFQ9HCQ7 196 aa12.57□□□□□ -0.4
DDX56-201ENST00000258772 CALYQ9NYX4 217 aa12.57□□□□□ -0.4
DDX56-201ENST00000258772 NBEAQ8NFP9 2946 aa12.57□□□□□ -0.4
DDX56-201ENST00000258772 SPENQ96T58 3664 aaKnown RBP12.57□□□□□ -0.4
DDX56-201ENST00000258772 TSTD3H0UI37 97 aa12.57□□□□□ -0.4
DDX56-201ENST00000258772 CXorf1O96002 111 aa12.57□□□□□ -0.4
DDX56-201ENST00000258772 LHBP01229 141 aa12.57□□□□□ -0.4
DDX56-201ENST00000258772 IL3RAP26951 378 aa12.57□□□□□ -0.4
DDX56-201ENST00000258772 ZNF83P51522 516 aa12.57□□□□□ -0.4
DDX56-201ENST00000258772 PRSS8Q16651 343 aa12.57□□□□□ -0.4
DDX56-201ENST00000258772 SEM1Q6ZVN7 128 aa12.57□□□□□ -0.4
DDX56-201ENST00000258772 ZNF114Q8NC26 417 aa12.57□□□□□ -0.4
DDX56-201ENST00000258772 LSM4Q9Y4Z0 139 aaKnown RBP12.57□□□□□ -0.4
DDX56-201ENST00000258772 TRGV8A0A0C4DH27 118 aa12.56□□□□□ -0.4
DDX56-201ENST00000258772 PGPEP1LA6NFU8 196 aa12.56□□□□□ -0.4
DDX56-201ENST00000258772 C1QTNF9P0C862 333 aa12.56□□□□□ -0.4
DDX56-201ENST00000258772 TMEM144Q7Z5S9 345 aa12.56□□□□□ -0.4
DDX56-201ENST00000258772 OR4S2Q8NH73 311 aa12.56□□□□□ -0.4
DDX56-201ENST00000258772 LEAP2Q969E1 77 aa12.56□□□□□ -0.4
DDX56-201ENST00000258772 IMMP2LQ96T52 175 aa12.56□□□□□ -0.4
DDX56-201ENST00000258772 ITGB1BP1O14713 200 aa12.56□□□□□ -0.4
DDX56-201ENST00000258772 DDTP30046 118 aa12.56□□□□□ -0.4
DDX56-201ENST00000258772 RAB7AP51149 207 aa12.56□□□□□ -0.4
DDX56-201ENST00000258772 FOXL1Q12952 345 aa12.56□□□□□ -0.4
DDX56-201ENST00000258772 C17orf58Q2M2W7 97 aa12.56□□□□□ -0.4
DDX56-201ENST00000258772 CT45A1Q5HYN5 189 aa12.56□□□□□ -0.4
DDX56-201ENST00000258772 CT45A3Q8NHU0 189 aa12.56□□□□□ -0.4
DDX56-201ENST00000258772 ASCL3Q9NQ33 180 aa12.56□□□□□ -0.4
DDX56-201ENST00000258772 TANC2Q9HCD6 1990 aa12.55□□□□□ -0.4
DDX56-201ENST00000258772 TRBV20OR9-2A0A075B6H5 130 aa12.55□□□□□ -0.4
DDX56-201ENST00000258772 C15orf61A6NNL5 157 aa12.55□□□□□ -0.4
DDX56-201ENST00000258772 ANKRD39Q53RE8 183 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms