RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 MARCH11A6NNE9 402 aa13.36□□□□□ -0.27
SIN3B-201ENST00000248054 J3QR06 171 aa13.36□□□□□ -0.27
SIN3B-201ENST00000248054 APOBEC3AP31941 199 aaPredicted RBP13.36□□□□□ -0.27
SIN3B-201ENST00000248054 SSMEM1Q8WWF3 244 aa13.36□□□□□ -0.27
SIN3B-201ENST00000248054 SCNM1Q9BWG6 230 aa13.36□□□□□ -0.27
SIN3B-201ENST00000248054 OR51B2Q9Y5P1 312 aa13.36□□□□□ -0.27
SIN3B-201ENST00000248054 VN1R17PQ8TDU5 208 aa13.36□□□□□ -0.27
SIN3B-201ENST00000248054 TAF15Q92804 592 aaKnown RBP eCLIP13.36□□□□□ -0.27
SIN3B-201ENST00000248054 ZNF319Q9P2F9 582 aa13.36□□□□□ -0.27
SIN3B-201ENST00000248054 FAM186AA6NE01 2351 aa13.36□□□□□ -0.27
SIN3B-201ENST00000248054 TM4SF5O14894 197 aa13.36□□□□□ -0.27
SIN3B-201ENST00000248054 CD99P14209 185 aa13.36□□□□□ -0.27
SIN3B-201ENST00000248054 TIMP3P35625 211 aa13.36□□□□□ -0.27
SIN3B-201ENST00000248054 PI4KAP42356 2102 aa13.36□□□□□ -0.27
SIN3B-201ENST00000248054 SRSF7Q16629 238 aaKnown RBP eCLIP13.36□□□□□ -0.27
SIN3B-201ENST00000248054 WDR25Q64LD2 544 aaPredicted RBP13.36□□□□□ -0.27
SIN3B-201ENST00000248054 ZNF818PQ6ZRF7 136 aa13.36□□□□□ -0.27
SIN3B-201ENST00000248054 FGFRL1Q8N441 504 aa13.36□□□□□ -0.27
SIN3B-201ENST00000248054 ZDHHC16Q969W1 377 aa13.36□□□□□ -0.27
SIN3B-201ENST00000248054 A6NNC1 897 aa13.36□□□□□ -0.27
SIN3B-201ENST00000248054 IL18BPO95998 194 aa13.36□□□□□ -0.27
SIN3B-201ENST00000248054 COL8A1P27658 744 aa13.36□□□□□ -0.27
SIN3B-201ENST00000248054 OR4X1Q8NH49 305 aa13.36□□□□□ -0.27
SIN3B-201ENST00000248054 ZNF106Q9H2Y7 1883 aaKnown RBP13.35□□□□□ -0.27
SIN3B-201ENST00000248054 RTP5Q14D33 572 aa13.35□□□□□ -0.27
SIN3B-201ENST00000248054 FAM166AQ6J272 317 aa13.35□□□□□ -0.27
SIN3B-201ENST00000248054 SPSB4Q96A44 273 aa13.35□□□□□ -0.27
SIN3B-201ENST00000248054 GPR146Q96CH1 333 aa13.35□□□□□ -0.27
SIN3B-201ENST00000248054 PNRC2Q9NPJ4 139 aaKnown RBP13.35□□□□□ -0.27
SIN3B-201ENST00000248054 LDLRAD4O15165 306 aa13.35□□□□□ -0.27
SIN3B-201ENST00000248054 ZNHIT1O43257 154 aa13.35□□□□□ -0.27
SIN3B-201ENST00000248054 CFPP27918 469 aa13.35□□□□□ -0.27
SIN3B-201ENST00000248054 C1QL4Q86Z23 238 aa13.35□□□□□ -0.27
SIN3B-201ENST00000248054 FAM216AQ8WUB2 273 aa13.35□□□□□ -0.27
SIN3B-201ENST00000248054 H0YIZ8 118 aa13.35□□□□□ -0.27
SIN3B-201ENST00000248054 CORTO00230 105 aa13.35□□□□□ -0.27
SIN3B-201ENST00000248054 IGHG3P01860 377 aa13.35□□□□□ -0.27
SIN3B-201ENST00000248054 PQLC2Q6ZP29 291 aa13.35□□□□□ -0.27
SIN3B-201ENST00000248054 DMRTC2Q8IXT2 367 aaPredicted RBP13.35□□□□□ -0.27
SIN3B-201ENST00000248054 PAQR4Q8N4S7 273 aaPredicted RBP13.35□□□□□ -0.27
SIN3B-201ENST00000248054 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.35□□□□□ -0.27
SIN3B-201ENST00000248054 SGMS2Q8NHU3 365 aa13.35□□□□□ -0.27
SIN3B-201ENST00000248054 RASL11BQ9BPW5 248 aa13.35□□□□□ -0.27
SIN3B-201ENST00000248054 DNAJC4Q9NNZ3 241 aa13.35□□□□□ -0.27
SIN3B-201ENST00000248054 PLSCR4Q9NRQ2 329 aa13.35□□□□□ -0.27
SIN3B-201ENST00000248054 A6NDN8 102 aa13.35□□□□□ -0.27
SIN3B-201ENST00000248054 CEBPDP49716 269 aaPredicted RBP13.35□□□□□ -0.27
SIN3B-201ENST00000248054 HIST1H2BLQ99880 126 aa13.35□□□□□ -0.27
SIN3B-201ENST00000248054 C19orf24Q9BVV8 132 aa13.35□□□□□ -0.27
SIN3B-201ENST00000248054 SAPCD1Q5SSQ6 148 aa13.34□□□□□ -0.27
SIN3B-201ENST00000248054 WASHC3Q9Y3C0 194 aa13.34□□□□□ -0.27
SIN3B-201ENST00000248054 TP53BP1Q12888 1972 aaPredicted RBP13.34□□□□□ -0.27
SIN3B-201ENST00000248054 IGHV2-5P01817 119 aa13.34□□□□□ -0.27
SIN3B-201ENST00000248054 IER3P46695 156 aa13.34□□□□□ -0.27
SIN3B-201ENST00000248054 PXMP4Q9Y6I8 212 aa13.34□□□□□ -0.27
SIN3B-201ENST00000248054 A0A087WV48 116 aa13.34□□□□□ -0.27
SIN3B-201ENST00000248054 A0A1B0GWJ7 208 aa13.34□□□□□ -0.27
SIN3B-201ENST00000248054 OTX1P32242 354 aaPredicted RBP13.34□□□□□ -0.27
SIN3B-201ENST00000248054 JOSD1Q15040 202 aaPredicted RBP13.34□□□□□ -0.27
SIN3B-201ENST00000248054 ZCCHC14Q8WYQ9 949 aaKnown RBP13.34□□□□□ -0.27
SIN3B-201ENST00000248054 CYTL1Q9NRR1 136 aa13.34□□□□□ -0.27
SIN3B-201ENST00000248054 SRCAPQ6ZRS2 3230 aa13.34□□□□□ -0.27
SIN3B-201ENST00000248054 DLEU1O43261 78 aa13.34□□□□□ -0.27
SIN3B-201ENST00000248054 HLA-DQA1P01909 254 aa13.34□□□□□ -0.27
SIN3B-201ENST00000248054 FAM27E3Q08E93 113 aa13.34□□□□□ -0.27
SIN3B-201ENST00000248054 C5orf17Q8NAS9 161 aa13.34□□□□□ -0.27
SIN3B-201ENST00000248054 TMEM186Q96B77 213 aa13.34□□□□□ -0.27
SIN3B-201ENST00000248054 UCP1P25874 307 aa13.33□□□□□ -0.27
SIN3B-201ENST00000248054 COMPP49747 757 aaPredicted RBP13.33□□□□□ -0.27
SIN3B-201ENST00000248054 RUNX1Q01196 453 aa13.33□□□□□ -0.27
SIN3B-201ENST00000248054 RSPO3Q9BXY4 272 aaPredicted RBP13.33□□□□□ -0.27
SIN3B-201ENST00000248054 IGHV1-69-2A0A0G2JMI3 117 aa13.33□□□□□ -0.28
SIN3B-201ENST00000248054 GNG7O60262 68 aa13.33□□□□□ -0.28
SIN3B-201ENST00000248054 DRAM1Q8N682 238 aa13.33□□□□□ -0.28
SIN3B-201ENST00000248054 C2orf16Q68DN1 1984 aa13.33□□□□□ -0.28
SIN3B-201ENST00000248054 TRBV9A0A0B4J1U6 114 aa13.33□□□□□ -0.28
SIN3B-201ENST00000248054 EREGO14944 169 aa13.33□□□□□ -0.28
SIN3B-201ENST00000248054 OR4B1Q8NGF8 309 aa13.33□□□□□ -0.28
SIN3B-201ENST00000248054 OR9G1Q8NH87 305 aa13.33□□□□□ -0.28
SIN3B-201ENST00000248054 RTBDNQ9BSG5 229 aaPredicted RBP13.33□□□□□ -0.28
SIN3B-201ENST00000248054 A8MWL6 223 aa13.32□□□□□ -0.28
SIN3B-201ENST00000248054 LGALS7P47929 136 aa13.32□□□□□ -0.28
SIN3B-201ENST00000248054 C10orf91Q5T1B1 145 aa13.32□□□□□ -0.28
SIN3B-201ENST00000248054 TMEM250H0YL14 139 aa13.32□□□□□ -0.28
SIN3B-201ENST00000248054 F2RL2O00254 374 aa13.32□□□□□ -0.28
SIN3B-201ENST00000248054 RHBDL1O75783 438 aa13.32□□□□□ -0.28
SIN3B-201ENST00000248054 CXCL1P09341 107 aa13.32□□□□□ -0.28
SIN3B-201ENST00000248054 MEF2CQ06413 473 aaPredicted RBP13.32□□□□□ -0.28
SIN3B-201ENST00000248054 PAXXQ9BUH6 204 aa13.32□□□□□ -0.28
SIN3B-201ENST00000248054 RBKSQ9H477 322 aa13.32□□□□□ -0.28
SIN3B-201ENST00000248054 SRD5A3Q9H8P0 318 aa13.32□□□□□ -0.28
SIN3B-201ENST00000248054 OR2J3O76001 311 aa13.32□□□□□ -0.28
SIN3B-201ENST00000248054 GOSR1O95249 250 aa13.32□□□□□ -0.28
SIN3B-201ENST00000248054 PMCHL1Q16048 86 aa13.32□□□□□ -0.28
SIN3B-201ENST00000248054 MMD2Q8IY49 270 aa13.32□□□□□ -0.28
SIN3B-201ENST00000248054 PCGF1Q9BSM1 259 aa13.32□□□□□ -0.28
SIN3B-201ENST00000248054 KIF26BQ2KJY2 2108 aa13.32□□□□□ -0.28
SIN3B-201ENST00000248054 TCL1AP56279 114 aa13.32□□□□□ -0.28
SIN3B-201ENST00000248054 CXorf66Q5JRM2 361 aaPredicted RBP13.32□□□□□ -0.28
SIN3B-201ENST00000248054 SPACA3Q8IXA5 215 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms