RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 OR4F5Q8NH21 305 aa18.09■□□□□ 0.49
RNF39-201ENST00000244360 DDB2Q92466 427 aa18.09■□□□□ 0.49
RNF39-201ENST00000244360 ABHD17AQ96GS6 310 aa18.09■□□□□ 0.49
RNF39-201ENST00000244360 OR4F4Q96R69 305 aa18.09■□□□□ 0.49
RNF39-201ENST00000244360 DIRC2Q96SL1 478 aa18.09■□□□□ 0.49
RNF39-201ENST00000244360 Q9UFV3 132 aa18.09■□□□□ 0.49
RNF39-201ENST00000244360 KBTBD11-OT1A0A1B0GTJ5 212 aa18.08■□□□□ 0.49
RNF39-201ENST00000244360 RBMXL2O75526 392 aaKnown RBP18.08■□□□□ 0.49
RNF39-201ENST00000244360 KIR2DS2P43631 304 aa18.08■□□□□ 0.49
RNF39-201ENST00000244360 RAB7AP51149 207 aa18.08■□□□□ 0.49
RNF39-201ENST00000244360 PDLIM3Q53GG5 364 aaPredicted RBP18.08■□□□□ 0.49
RNF39-201ENST00000244360 NEIL1Q96FI4 390 aaPredicted RBP18.08■□□□□ 0.49
RNF39-201ENST00000244360 GAFA1Q96PS6 74 aa18.08■□□□□ 0.49
RNF39-201ENST00000244360 ELOVL5Q9NYP7 299 aa18.08■□□□□ 0.49
RNF39-201ENST00000244360 C15orf62A8K5M9 175 aa18.08■□□□□ 0.48
RNF39-201ENST00000244360 PRRG2O14669 202 aa18.08■□□□□ 0.48
RNF39-201ENST00000244360 FABP4P15090 132 aa18.08■□□□□ 0.48
RNF39-201ENST00000244360 TNFSF4P23510 183 aa18.08■□□□□ 0.48
RNF39-201ENST00000244360 GALR1P47211 349 aa18.08■□□□□ 0.48
RNF39-201ENST00000244360 TFF3Q07654 80 aa18.08■□□□□ 0.48
RNF39-201ENST00000244360 TMEM183AQ8IXX5 376 aa18.08■□□□□ 0.48
RNF39-201ENST00000244360 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.08■□□□□ 0.48
RNF39-201ENST00000244360 OR51G1Q8NGK1 321 aa18.08■□□□□ 0.48
RNF39-201ENST00000244360 OR4X1Q8NH49 305 aa18.08■□□□□ 0.48
RNF39-201ENST00000244360 RAB24Q969Q5 203 aa18.08■□□□□ 0.48
RNF39-201ENST00000244360 FAM234AQ9H0X4 552 aa18.08■□□□□ 0.48
RNF39-201ENST00000244360 MUC6Q6W4X9 2439 aa18.08■□□□□ 0.48
RNF39-201ENST00000244360 MGAQ8IWI9 3026 aa18.08■□□□□ 0.48
RNF39-201ENST00000244360 SLC31A2O15432 143 aa18.07■□□□□ 0.48
RNF39-201ENST00000244360 HRASP01112 189 aa18.07■□□□□ 0.48
RNF39-201ENST00000244360 TMEM249Q2WGJ8 235 aa18.07■□□□□ 0.48
RNF39-201ENST00000244360 C4orf17Q53FE4 359 aa18.07■□□□□ 0.48
RNF39-201ENST00000244360 PDZD11Q5EBL8 140 aa18.07■□□□□ 0.48
RNF39-201ENST00000244360 TMEM108Q6UXF1 575 aa18.07■□□□□ 0.48
RNF39-201ENST00000244360 OR52E5Q8NH55 327 aa18.07■□□□□ 0.48
RNF39-201ENST00000244360 LINC00574Q9H8X3 128 aa18.07■□□□□ 0.48
RNF39-201ENST00000244360 TP53TG5Q9Y2B4 290 aa18.07■□□□□ 0.48
RNF39-201ENST00000244360 DSCAMO60469 2012 aa18.07■□□□□ 0.48
RNF39-201ENST00000244360 TRBV23-1A0A0A0MS06 115 aa18.07■□□□□ 0.48
RNF39-201ENST00000244360 SPCS3P61009 180 aa18.07■□□□□ 0.48
RNF39-201ENST00000244360 RPP30P78346 268 aaKnown RBP18.07■□□□□ 0.48
RNF39-201ENST00000244360 DUX4L9Q6RFH8 374 aaPredicted RBP18.07■□□□□ 0.48
RNF39-201ENST00000244360 TCF23Q7RTU1 214 aa18.07■□□□□ 0.48
RNF39-201ENST00000244360 Q8NA96 180 aa18.07■□□□□ 0.48
RNF39-201ENST00000244360 PACRGQ96M98 296 aaPredicted RBP18.07■□□□□ 0.48
RNF39-201ENST00000244360 CUL9Q8IWT3 2517 aa18.06■□□□□ 0.48
RNF39-201ENST00000244360 PPP5D1E7EU14 171 aa18.06■□□□□ 0.48
RNF39-201ENST00000244360 C16orf97H3BN30 126 aa18.06■□□□□ 0.48
RNF39-201ENST00000244360 CDC34P49427 236 aaPredicted RBP18.06■□□□□ 0.48
RNF39-201ENST00000244360 FAM3BP58499 235 aaPredicted RBP18.06■□□□□ 0.48
RNF39-201ENST00000244360 SPINK9Q5DT21 86 aa18.06■□□□□ 0.48
RNF39-201ENST00000244360 UTF1Q5T230 341 aa18.06■□□□□ 0.48
RNF39-201ENST00000244360 PRAMEF5Q5TYX0 476 aa18.06■□□□□ 0.48
RNF39-201ENST00000244360 ZNF788Q6ZQV5 615 aa18.06■□□□□ 0.48
RNF39-201ENST00000244360 S1PR3Q99500 378 aa18.06■□□□□ 0.48
RNF39-201ENST00000244360 PRDM13Q9H4Q3 707 aa18.06■□□□□ 0.48
RNF39-201ENST00000244360 PLCE1Q9P212 2302 aa18.06■□□□□ 0.48
RNF39-201ENST00000244360 TRGV10A0A0A0MS01 117 aa18.06■□□□□ 0.48
RNF39-201ENST00000244360 HMGB3O15347 200 aaKnown RBP18.06■□□□□ 0.48
RNF39-201ENST00000244360 SRP14P37108 136 aaKnown RBP18.06■□□□□ 0.48
RNF39-201ENST00000244360 CT45A1Q5HYN5 189 aa18.06■□□□□ 0.48
RNF39-201ENST00000244360 TEX36Q5VZQ5 186 aa18.06■□□□□ 0.48
RNF39-201ENST00000244360 C1orf229Q6ZS94 237 aaPredicted RBP18.06■□□□□ 0.48
RNF39-201ENST00000244360 CT45A3Q8NHU0 189 aa18.06■□□□□ 0.48
RNF39-201ENST00000244360 RAB1CQ92928 201 aa18.06■□□□□ 0.48
RNF39-201ENST00000244360 ANKRD11Q6UB99 2663 aaPredicted RBP18.05■□□□□ 0.48
RNF39-201ENST00000244360 ERVK-16P61578 105 aa18.05■□□□□ 0.48
RNF39-201ENST00000244360 ZNF439Q8NDP4 499 aa18.05■□□□□ 0.48
RNF39-201ENST00000244360 OR5R1Q8NH85 324 aa18.05■□□□□ 0.48
RNF39-201ENST00000244360 HIST1H2BLQ99880 126 aa18.05■□□□□ 0.48
RNF39-201ENST00000244360 JKAMPQ9P055 326 aa18.05■□□□□ 0.48
RNF39-201ENST00000244360 WDR83OSQ9Y284 106 aa18.05■□□□□ 0.48
RNF39-201ENST00000244360 DSCAML1Q8TD84 2053 aa18.05■□□□□ 0.48
RNF39-201ENST00000244360 MPDU1O75352 247 aa18.04■□□□□ 0.48
RNF39-201ENST00000244360 GYPAP02724 150 aa18.04■□□□□ 0.48
RNF39-201ENST00000244360 RELBQ01201 579 aa18.04■□□□□ 0.48
RNF39-201ENST00000244360 DEFA6Q01524 100 aa18.04■□□□□ 0.48
RNF39-201ENST00000244360 COA6Q5JTJ3 125 aaKnown RBP18.04■□□□□ 0.48
RNF39-201ENST00000244360 ACY3Q96HD9 319 aa18.04■□□□□ 0.48
RNF39-201ENST00000244360 PDE6DO43924 150 aa18.04■□□□□ 0.48
RNF39-201ENST00000244360 PAGE4O60829 102 aa18.04■□□□□ 0.48
RNF39-201ENST00000244360 IGHV3-7P01780 117 aa18.04■□□□□ 0.48
RNF39-201ENST00000244360 HNF4GQ14541 408 aa18.04■□□□□ 0.48
RNF39-201ENST00000244360 TMEM30BQ3MIR4 351 aa18.04■□□□□ 0.48
RNF39-201ENST00000244360 OR4A16Q8NH70 328 aa18.04■□□□□ 0.48
RNF39-201ENST00000244360 OR4S2Q8NH73 311 aa18.04■□□□□ 0.48
RNF39-201ENST00000244360 CORO2AQ92828 525 aa18.04■□□□□ 0.48
RNF39-201ENST00000244360 ZNF835Q9Y2P0 537 aa18.04■□□□□ 0.48
RNF39-201ENST00000244360 VDAC2P45880 294 aaPredicted RBP18.03■□□□□ 0.48
RNF39-201ENST00000244360 CDPF1Q6NVV7 123 aa18.03■□□□□ 0.48
RNF39-201ENST00000244360 CISD2Q8N5K1 135 aaKnown RBP18.03■□□□□ 0.48
RNF39-201ENST00000244360 LINC00469Q8N7U9 141 aa18.03■□□□□ 0.48
RNF39-201ENST00000244360 RNASEH2CQ8TDP1 164 aaKnown RBP18.03■□□□□ 0.48
RNF39-201ENST00000244360 BTF3L4Q96K17 158 aa18.03■□□□□ 0.48
RNF39-201ENST00000244360 DVL1O14640 695 aa18.03■□□□□ 0.48
RNF39-201ENST00000244360 PKIAP61925 76 aa18.03■□□□□ 0.48
RNF39-201ENST00000244360 RPS16P62249 146 aaKnown RBP18.03■□□□□ 0.48
RNF39-201ENST00000244360 C9orf152Q5JTZ5 239 aa18.03■□□□□ 0.48
RNF39-201ENST00000244360 KCNIP4Q6PIL6 250 aa18.03■□□□□ 0.48
RNF39-201ENST00000244360 SSX9Q7RTT3 188 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms