RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 MBD3L3A6NE82 208 aaPredicted RBP11.9□□□□□ -0.5
HIF3A-202ENST00000244303 MBD3L5A6NJ08 208 aaPredicted RBP11.9□□□□□ -0.5
HIF3A-202ENST00000244303 FAM90A9PA6NNJ1 464 aa11.9□□□□□ -0.5
HIF3A-202ENST00000244303 DVL1O14640 695 aa11.9□□□□□ -0.5
HIF3A-202ENST00000244303 BMP5P22003 454 aa11.9□□□□□ -0.5
HIF3A-202ENST00000244303 NPPCP23582 126 aa11.9□□□□□ -0.5
HIF3A-202ENST00000244303 SPCS3P61009 180 aa11.9□□□□□ -0.5
HIF3A-202ENST00000244303 JOSD1Q15040 202 aaPredicted RBP11.9□□□□□ -0.5
HIF3A-202ENST00000244303 CLEC12BQ2HXU8 276 aa11.9□□□□□ -0.5
HIF3A-202ENST00000244303 CR1LQ2VPA4 569 aa11.9□□□□□ -0.5
HIF3A-202ENST00000244303 MOGAT3Q86VF5 341 aa11.9□□□□□ -0.5
HIF3A-202ENST00000244303 OR1P1Q8NH06 330 aa11.9□□□□□ -0.5
HIF3A-202ENST00000244303 MBD3L2Q8NHZ7 208 aaPredicted RBP11.9□□□□□ -0.5
HIF3A-202ENST00000244303 OR5B12Q96R08 314 aa11.9□□□□□ -0.5
HIF3A-202ENST00000244303 IFI27L2Q9H2X8 130 aa11.9□□□□□ -0.5
HIF3A-202ENST00000244303 HEYLQ9NQ87 328 aaPredicted RBP11.9□□□□□ -0.5
HIF3A-202ENST00000244303 RAI1Q7Z5J4 1906 aaPredicted RBP11.9□□□□□ -0.5
HIF3A-202ENST00000244303 XKRY2A2RUG3 117 aa11.89□□□□□ -0.51
HIF3A-202ENST00000244303 RRHO14718 337 aa11.89□□□□□ -0.51
HIF3A-202ENST00000244303 UTF1Q5T230 341 aa11.89□□□□□ -0.51
HIF3A-202ENST00000244303 PPP1R35Q8TAP8 253 aa11.89□□□□□ -0.51
HIF3A-202ENST00000244303 LAMA5O15230 3695 aa11.89□□□□□ -0.51
HIF3A-202ENST00000244303 PPP5D1E7EU14 171 aa11.89□□□□□ -0.51
HIF3A-202ENST00000244303 M0R1B8 84 aa11.89□□□□□ -0.51
HIF3A-202ENST00000244303 F2RL2O00254 374 aa11.89□□□□□ -0.51
HIF3A-202ENST00000244303 CRYAAP02489 173 aa11.89□□□□□ -0.51
HIF3A-202ENST00000244303 GZMBP10144 247 aa11.89□□□□□ -0.51
HIF3A-202ENST00000244303 VDAC2P45880 294 aaPredicted RBP11.89□□□□□ -0.51
HIF3A-202ENST00000244303 UBE2G2P60604 165 aa11.89□□□□□ -0.51
HIF3A-202ENST00000244303 ERVK-16P61578 105 aa11.89□□□□□ -0.51
HIF3A-202ENST00000244303 RELBQ01201 579 aa11.89□□□□□ -0.51
HIF3A-202ENST00000244303 TREML4Q6UXN2 200 aa11.89□□□□□ -0.51
HIF3A-202ENST00000244303 Q6ZS92 163 aa11.89□□□□□ -0.51
HIF3A-202ENST00000244303 C1orf229Q6ZS94 237 aaPredicted RBP11.89□□□□□ -0.51
HIF3A-202ENST00000244303 FAM169BQ8N8A8 192 aa11.89□□□□□ -0.51
HIF3A-202ENST00000244303 OR5T1Q8NG75 326 aa11.89□□□□□ -0.51
HIF3A-202ENST00000244303 LEAP2Q969E1 77 aa11.89□□□□□ -0.51
HIF3A-202ENST00000244303 PATZ1Q9HBE1 687 aaKnown RBP11.89□□□□□ -0.51
HIF3A-202ENST00000244303 DMXL1Q9Y485 3027 aa11.88□□□□□ -0.51
HIF3A-202ENST00000244303 HRASP01112 189 aa11.88□□□□□ -0.51
HIF3A-202ENST00000244303 AMBPP02760 352 aa11.88□□□□□ -0.51
HIF3A-202ENST00000244303 CFHR2P36980 270 aa11.88□□□□□ -0.51
HIF3A-202ENST00000244303 RPP30P78346 268 aaKnown RBP11.88□□□□□ -0.51
HIF3A-202ENST00000244303 VHLLQ6RSH7 139 aa11.88□□□□□ -0.51
HIF3A-202ENST00000244303 DMRTC2Q8IXT2 367 aaPredicted RBP11.88□□□□□ -0.51
HIF3A-202ENST00000244303 ANAPC16Q96DE5 110 aa11.88□□□□□ -0.51
HIF3A-202ENST00000244303 MISP3Q96FF7 219 aa11.88□□□□□ -0.51
HIF3A-202ENST00000244303 S1PR3Q99500 378 aa11.88□□□□□ -0.51
HIF3A-202ENST00000244303 PCGF1Q9BSM1 259 aa11.88□□□□□ -0.51
HIF3A-202ENST00000244303 TMEM140Q9NV12 185 aa11.88□□□□□ -0.51
HIF3A-202ENST00000244303 CALYQ9NYX4 217 aa11.88□□□□□ -0.51
HIF3A-202ENST00000244303 A0A1W2PPQ1 181 aa11.88□□□□□ -0.51
HIF3A-202ENST00000244303 A0A1W2PPV4 95 aa11.88□□□□□ -0.51
HIF3A-202ENST00000244303 PRSS46E5RG02 174 aa11.88□□□□□ -0.51
HIF3A-202ENST00000244303 RBFOX2O43251 390 aaKnown RBP eCLIP11.88□□□□□ -0.51
HIF3A-202ENST00000244303 SPRY3O43610 288 aa11.88□□□□□ -0.51
HIF3A-202ENST00000244303 GFRA3O60609 400 aa11.88□□□□□ -0.51
HIF3A-202ENST00000244303 SELLP14151 372 aa11.88□□□□□ -0.51
HIF3A-202ENST00000244303 NBL1P41271 181 aa11.88□□□□□ -0.51
HIF3A-202ENST00000244303 ATP5G3P48201 142 aa11.88□□□□□ -0.51
HIF3A-202ENST00000244303 FAM201AQ5SY85 155 aa11.88□□□□□ -0.51
HIF3A-202ENST00000244303 TGIF2LYQ8IUE0 185 aa11.88□□□□□ -0.51
HIF3A-202ENST00000244303 ABHD12Q8N2K0 398 aa11.88□□□□□ -0.51
HIF3A-202ENST00000244303 OR52E5Q8NH55 327 aa11.88□□□□□ -0.51
HIF3A-202ENST00000244303 RAB1CQ92928 201 aa11.88□□□□□ -0.51
HIF3A-202ENST00000244303 K7EM74 188 aa11.87□□□□□ -0.51
HIF3A-202ENST00000244303 KLK10O43240 276 aa11.87□□□□□ -0.51
HIF3A-202ENST00000244303 MPDU1O75352 247 aa11.87□□□□□ -0.51
HIF3A-202ENST00000244303 VENTXO95231 258 aa11.87□□□□□ -0.51
HIF3A-202ENST00000244303 GNB1P62873 340 aa11.87□□□□□ -0.51
HIF3A-202ENST00000244303 CST9LP1Q5W188 147 aa11.87□□□□□ -0.51
HIF3A-202ENST00000244303 FAM216AQ8WUB2 273 aa11.87□□□□□ -0.51
HIF3A-202ENST00000244303 TMEM170AQ8WVE7 144 aa11.87□□□□□ -0.51
HIF3A-202ENST00000244303 ITLN1Q8WWA0 313 aa11.87□□□□□ -0.51
HIF3A-202ENST00000244303 NOL4LQ96MY1 436 aaPredicted RBP11.87□□□□□ -0.51
HIF3A-202ENST00000244303 MGST2Q99735 147 aa11.87□□□□□ -0.51
HIF3A-202ENST00000244303 MS4A5Q9H3V2 200 aa11.87□□□□□ -0.51
HIF3A-202ENST00000244303 MKRN2OSH3BPM6 223 aa11.86□□□□□ -0.51
HIF3A-202ENST00000244303 OPRK1P41145 380 aa11.86□□□□□ -0.51
HIF3A-202ENST00000244303 KLF3P57682 345 aaPredicted RBP11.86□□□□□ -0.51
HIF3A-202ENST00000244303 PDLIM3Q53GG5 364 aaPredicted RBP11.86□□□□□ -0.51
HIF3A-202ENST00000244303 LBHQ53QV2 105 aaPredicted RBP11.86□□□□□ -0.51
HIF3A-202ENST00000244303 ZNF474Q6S9Z5 364 aaPredicted RBP11.86□□□□□ -0.51
HIF3A-202ENST00000244303 RBMXL3Q8N7X1 1067 aaKnown RBP11.86□□□□□ -0.51
HIF3A-202ENST00000244303 RNASEH2CQ8TDP1 164 aaKnown RBP11.86□□□□□ -0.51
HIF3A-202ENST00000244303 DDB2Q92466 427 aa11.86□□□□□ -0.51
HIF3A-202ENST00000244303 FAM215AQ9Y5M1 114 aa11.86□□□□□ -0.51
HIF3A-202ENST00000244303 ICE1Q9Y2F5 2266 aa11.86□□□□□ -0.51
HIF3A-202ENST00000244303 A8MWP6 167 aa11.86□□□□□ -0.51
HIF3A-202ENST00000244303 PDE6DO43924 150 aa11.86□□□□□ -0.51
HIF3A-202ENST00000244303 LHBP01229 141 aa11.86□□□□□ -0.51
HIF3A-202ENST00000244303 C17orf58Q2M2W7 97 aa11.86□□□□□ -0.51
HIF3A-202ENST00000244303 MIC13Q5XKP0 118 aa11.86□□□□□ -0.51
HIF3A-202ENST00000244303 ZNF664Q8N3J9 261 aa11.86□□□□□ -0.51
HIF3A-202ENST00000244303 RPRMLQ8N4K4 120 aa11.86□□□□□ -0.51
HIF3A-202ENST00000244303 SDSLQ96GA7 329 aa11.86□□□□□ -0.51
HIF3A-202ENST00000244303 C2orf88Q9BSF0 95 aa11.86□□□□□ -0.51
HIF3A-202ENST00000244303 DERL1Q9BUN8 251 aa11.86□□□□□ -0.51
HIF3A-202ENST00000244303 GGTLC1Q9BX51 225 aa11.86□□□□□ -0.51
HIF3A-202ENST00000244303 AURKAIP1Q9NWT8 199 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms