RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 MUC21Q5SSG8 566 aa11.58□□□□□ -0.56
SIX4-201ENST00000216513 GTF3AQ92664 365 aaKnown RBP11.58□□□□□ -0.56
SIX4-201ENST00000216513 SH3BGRL3Q9H299 93 aa11.58□□□□□ -0.56
SIX4-201ENST00000216513 ABCA4P78363 2273 aa11.58□□□□□ -0.56
SIX4-201ENST00000216513 K7EM74 188 aa11.57□□□□□ -0.56
SIX4-201ENST00000216513 INHBBP09529 407 aa11.57□□□□□ -0.56
SIX4-201ENST00000216513 GPR183P32249 361 aa11.57□□□□□ -0.56
SIX4-201ENST00000216513 FUT9Q9Y231 359 aa11.57□□□□□ -0.56
SIX4-201ENST00000216513 PSMB11A5LHX3 300 aa11.57□□□□□ -0.56
SIX4-201ENST00000216513 TBX6O95947 436 aaPredicted RBP11.57□□□□□ -0.56
SIX4-201ENST00000216513 MBPP02686 304 aaPredicted RBP11.57□□□□□ -0.56
SIX4-201ENST00000216513 B2MP61769 119 aa11.57□□□□□ -0.56
SIX4-201ENST00000216513 LDLRAD3Q86YD5 345 aa11.57□□□□□ -0.56
SIX4-201ENST00000216513 UBE2DNLQ8IWF7 75 aa11.57□□□□□ -0.56
SIX4-201ENST00000216513 H3BUX3 64 aa11.57□□□□□ -0.56
SIX4-201ENST00000216513 PRSS1P07477 247 aa11.57□□□□□ -0.56
SIX4-201ENST00000216513 COL8A2P25067 703 aa11.57□□□□□ -0.56
SIX4-201ENST00000216513 CLRN3Q8NCR9 226 aa11.57□□□□□ -0.56
SIX4-201ENST00000216513 OR13A1Q8NGR1 328 aa11.57□□□□□ -0.56
SIX4-201ENST00000216513 IGHG3P01860 377 aa11.57□□□□□ -0.56
SIX4-201ENST00000216513 ZP3P21754 424 aa11.57□□□□□ -0.56
SIX4-201ENST00000216513 HOGA1Q86XE5 327 aa11.57□□□□□ -0.56
SIX4-201ENST00000216513 C9orf62Q8N4C0 152 aa11.57□□□□□ -0.56
SIX4-201ENST00000216513 S100A8P05109 93 aa11.57□□□□□ -0.56
SIX4-201ENST00000216513 CXCL2P19875 107 aa11.57□□□□□ -0.56
SIX4-201ENST00000216513 OR10J1P30954 320 aa11.57□□□□□ -0.56
SIX4-201ENST00000216513 TRAF4Q9BUZ4 470 aaPredicted RBP11.57□□□□□ -0.56
SIX4-201ENST00000216513 LINC00312Q9Y6C7 94 aa11.57□□□□□ -0.56
SIX4-201ENST00000216513 KBTBD11-OT1A0A1B0GTJ5 212 aa11.56□□□□□ -0.56
SIX4-201ENST00000216513 CRYGSP22914 178 aa11.56□□□□□ -0.56
SIX4-201ENST00000216513 IER3P46695 156 aa11.56□□□□□ -0.56
SIX4-201ENST00000216513 MEF2CQ06413 473 aaPredicted RBP11.56□□□□□ -0.56
SIX4-201ENST00000216513 IGFL3Q6UXB1 125 aa11.56□□□□□ -0.56
SIX4-201ENST00000216513 OR8A1Q8NGG7 326 aa11.56□□□□□ -0.56
SIX4-201ENST00000216513 SULT1A1P50225 295 aa11.56□□□□□ -0.56
SIX4-201ENST00000216513 CR1LQ2VPA4 569 aa11.56□□□□□ -0.56
SIX4-201ENST00000216513 OR4C5Q8NGB2 326 aa11.56□□□□□ -0.56
SIX4-201ENST00000216513 FGFBP3Q8TAT2 258 aa11.56□□□□□ -0.56
SIX4-201ENST00000216513 LSM10Q969L4 123 aaKnown RBP11.56□□□□□ -0.56
SIX4-201ENST00000216513 TEX50A0A1B0GTY4 177 aa11.56□□□□□ -0.56
SIX4-201ENST00000216513 FAM162BQ5T6X4 162 aa11.56□□□□□ -0.56
SIX4-201ENST00000216513 MRPL20Q9BYC9 149 aaKnown RBP11.56□□□□□ -0.56
SIX4-201ENST00000216513 NYNRINQ9P2P1 1898 aaKnown RBP11.56□□□□□ -0.56
SIX4-201ENST00000216513 SRSF10O75494 262 aaKnown RBP11.56□□□□□ -0.56
SIX4-201ENST00000216513 ZNF385CQ66K41 422 aaPredicted RBP11.56□□□□□ -0.56
SIX4-201ENST00000216513 RARRES2Q99969 163 aa11.56□□□□□ -0.56
SIX4-201ENST00000216513 ZNF426Q9BUY5 554 aa11.56□□□□□ -0.56
SIX4-201ENST00000216513 SLC35B3Q9H1N7 401 aa11.56□□□□□ -0.56
SIX4-201ENST00000216513 IGLV3-32A0A0A0MS00 114 aa11.56□□□□□ -0.56
SIX4-201ENST00000216513 DPRXA6NFQ7 191 aa11.56□□□□□ -0.56
SIX4-201ENST00000216513 TMEM30BQ3MIR4 351 aa11.56□□□□□ -0.56
SIX4-201ENST00000216513 FAM210BQ96KR6 192 aa11.56□□□□□ -0.56
SIX4-201ENST00000216513 BEX4Q9NWD9 120 aaPredicted RBP11.56□□□□□ -0.56
SIX4-201ENST00000216513 NPIPB13A6NJU9 1138 aa11.55□□□□□ -0.56
SIX4-201ENST00000216513 NPIPB4C9JG80 1138 aa11.55□□□□□ -0.56
SIX4-201ENST00000216513 EGR1P18146 543 aa11.55□□□□□ -0.56
SIX4-201ENST00000216513 SPCS3P61009 180 aa11.55□□□□□ -0.56
SIX4-201ENST00000216513 WDR25Q64LD2 544 aaPredicted RBP11.55□□□□□ -0.56
SIX4-201ENST00000216513 KLHDC1Q8N7A1 406 aa11.55□□□□□ -0.56
SIX4-201ENST00000216513 ALPK2Q86TB3 2170 aa11.55□□□□□ -0.56
SIX4-201ENST00000216513 E7EQL1 145 aa11.55□□□□□ -0.56
SIX4-201ENST00000216513 WT1P19544 449 aaPredicted RBP11.55□□□□□ -0.56
SIX4-201ENST00000216513 HIST1H1AQ02539 215 aaPredicted RBP11.55□□□□□ -0.56
SIX4-201ENST00000216513 FAM131CQ96AQ9 280 aa11.55□□□□□ -0.56
SIX4-201ENST00000216513 HIST1H1BP16401 226 aaKnown RBP11.55□□□□□ -0.56
SIX4-201ENST00000216513 NBASA2RRP1 2371 aa11.55□□□□□ -0.56
SIX4-201ENST00000216513 TRAV30A0A087WSZ9 112 aa11.55□□□□□ -0.56
SIX4-201ENST00000216513 IGKV3OR2-268A0A0C4DH90 116 aa11.55□□□□□ -0.56
SIX4-201ENST00000216513 FHITP49789 147 aa11.55□□□□□ -0.56
SIX4-201ENST00000216513 TMEM97Q5BJF2 176 aa11.55□□□□□ -0.56
SIX4-201ENST00000216513 SPANXN1Q5VSR9 72 aa11.55□□□□□ -0.56
SIX4-201ENST00000216513 TMEM116Q8NCL8 245 aa11.55□□□□□ -0.56
SIX4-201ENST00000216513 TMEM167BQ9NRX6 74 aa11.55□□□□□ -0.56
SIX4-201ENST00000216513 KIAA1671Q9BY89 1806 aa11.55□□□□□ -0.56
SIX4-201ENST00000216513 FAM90A10PA6NDY2 464 aa11.55□□□□□ -0.56
SIX4-201ENST00000216513 FAM90A18PA6NE21 464 aa11.55□□□□□ -0.56
SIX4-201ENST00000216513 FAM90A16PA6NEW6 464 aa11.55□□□□□ -0.56
SIX4-201ENST00000216513 FAM90A20PA6NIJ5 464 aa11.55□□□□□ -0.56
SIX4-201ENST00000216513 FAM90A8PA6NJQ4 464 aa11.55□□□□□ -0.56
SIX4-201ENST00000216513 FAM90A7PA6NKC0 464 aa11.55□□□□□ -0.56
SIX4-201ENST00000216513 FAM90A22PA8MWA6 464 aa11.55□□□□□ -0.56
SIX4-201ENST00000216513 FAM90A12PA8MX19 464 aa11.55□□□□□ -0.56
SIX4-201ENST00000216513 FAM90A5PA8MXJ8 464 aa11.55□□□□□ -0.56
SIX4-201ENST00000216513 FAM90A23PA8MXZ1 464 aa11.55□□□□□ -0.56
SIX4-201ENST00000216513 FAM90A15PP0C7V4 464 aa11.55□□□□□ -0.56
SIX4-201ENST00000216513 FAM90A13PP0C7W8 464 aa11.55□□□□□ -0.56
SIX4-201ENST00000216513 FAM90A14PP0C7W9 464 aa11.55□□□□□ -0.56
SIX4-201ENST00000216513 FAM90A24PP0C7X0 464 aa11.55□□□□□ -0.56
SIX4-201ENST00000216513 TMEM133Q9H2Q1 129 aa11.55□□□□□ -0.56
SIX4-201ENST00000216513 ZMAT5Q9UDW3 170 aaKnown RBP11.55□□□□□ -0.56
SIX4-201ENST00000216513 CLDN34H7C241 214 aa11.54□□□□□ -0.56
SIX4-201ENST00000216513 M0R2Z0 102 aa11.54□□□□□ -0.56
SIX4-201ENST00000216513 ZNF735P0CB33 412 aa11.54□□□□□ -0.56
SIX4-201ENST00000216513 FDX2Q6P4F2 183 aa11.54□□□□□ -0.56
SIX4-201ENST00000216513 AP5S1Q9NUS5 200 aa11.54□□□□□ -0.56
SIX4-201ENST00000216513 S1PR2O95136 353 aa11.54□□□□□ -0.56
SIX4-201ENST00000216513 MELTFP08582 738 aa11.54□□□□□ -0.56
SIX4-201ENST00000216513 KHDC3LQ587J8 217 aa11.54□□□□□ -0.56
SIX4-201ENST00000216513 STHQ8IWL8 128 aa11.54□□□□□ -0.56
SIX4-201ENST00000216513 SIP14410 1827 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms