RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 PDCD10Q9BUL8 212 aa10.42□□□□□ -0.74
PHGDH-218ENST00000641491 TMEM222Q9H0R3 208 aa10.42□□□□□ -0.74
PHGDH-218ENST00000641491 PLEKHA2Q9HB19 425 aa10.42□□□□□ -0.74
PHGDH-218ENST00000641491 A0A0A6YYJ9 748 aa10.41□□□□□ -0.74
PHGDH-218ENST00000641491 TRIM77I1YAP6 450 aa10.41□□□□□ -0.74
PHGDH-218ENST00000641491 NBR2O15453 112 aa10.41□□□□□ -0.74
PHGDH-218ENST00000641491 OR2F2O95006 317 aa10.41□□□□□ -0.74
PHGDH-218ENST00000641491 S1PR2O95136 353 aa10.41□□□□□ -0.74
PHGDH-218ENST00000641491 IER3P46695 156 aa10.41□□□□□ -0.74
PHGDH-218ENST00000641491 RPL30P62888 115 aaKnown RBP10.41□□□□□ -0.74
PHGDH-218ENST00000641491 DHRS2Q13268 280 aa10.41□□□□□ -0.74
PHGDH-218ENST00000641491 TMEM177Q53S58 311 aa10.41□□□□□ -0.74
PHGDH-218ENST00000641491 C9orf152Q5JTZ5 239 aa10.41□□□□□ -0.74
PHGDH-218ENST00000641491 SSX9Q7RTT3 188 aa10.41□□□□□ -0.74
PHGDH-218ENST00000641491 TMEM219Q86XT9 240 aa10.41□□□□□ -0.74
PHGDH-218ENST00000641491 OR4A16Q8NH70 328 aa10.41□□□□□ -0.74
PHGDH-218ENST00000641491 ZNF431Q8TF32 576 aaPredicted RBP10.41□□□□□ -0.74
PHGDH-218ENST00000641491 CFHR4Q92496 578 aa10.41□□□□□ -0.74
PHGDH-218ENST00000641491 RBPMSQ93062 196 aaKnown RBP10.41□□□□□ -0.74
PHGDH-218ENST00000641491 R3HDM4Q96D70 268 aa10.41□□□□□ -0.74
PHGDH-218ENST00000641491 GALNT14Q96FL9 552 aa10.41□□□□□ -0.74
PHGDH-218ENST00000641491 EAF1Q96JC9 268 aaPredicted RBP10.41□□□□□ -0.74
PHGDH-218ENST00000641491 TP53RKQ96S44 253 aa10.41□□□□□ -0.74
PHGDH-218ENST00000641491 SPIN2AQ99865 258 aa10.41□□□□□ -0.74
PHGDH-218ENST00000641491 SPIN2BQ9BPZ2 258 aa10.41□□□□□ -0.74
PHGDH-218ENST00000641491 ALX4Q9H161 411 aaPredicted RBP10.41□□□□□ -0.74
PHGDH-218ENST00000641491 METTL1Q9UBP6 276 aaKnown RBP10.41□□□□□ -0.74
PHGDH-218ENST00000641491 DUXBA0A1W2PPF3 345 aa10.4□□□□□ -0.74
PHGDH-218ENST00000641491 C9orf170A2RU37 121 aa10.4□□□□□ -0.74
PHGDH-218ENST00000641491 MARCH11A6NNE9 402 aa10.4□□□□□ -0.74
PHGDH-218ENST00000641491 RAMP3O60896 148 aa10.4□□□□□ -0.74
PHGDH-218ENST00000641491 CNIH1O95406 144 aa10.4□□□□□ -0.74
PHGDH-218ENST00000641491 DUS4LO95620 317 aaKnown RBP10.4□□□□□ -0.74
PHGDH-218ENST00000641491 KRASP01116 189 aa10.4□□□□□ -0.74
PHGDH-218ENST00000641491 IGKV1-16P04430 117 aa10.4□□□□□ -0.74
PHGDH-218ENST00000641491 IL5P05113 134 aa10.4□□□□□ -0.74
PHGDH-218ENST00000641491 HABP2Q14520 560 aaPredicted RBP10.4□□□□□ -0.74
PHGDH-218ENST00000641491 LDLRAD2Q5SZI1 272 aa10.4□□□□□ -0.74
PHGDH-218ENST00000641491 DDB2Q92466 427 aa10.4□□□□□ -0.74
PHGDH-218ENST00000641491 IL22RA2Q969J5 263 aa10.4□□□□□ -0.74
PHGDH-218ENST00000641491 TMEM230Q96A57 120 aa10.4□□□□□ -0.74
PHGDH-218ENST00000641491 RBM14Q96PK6 669 aaKnown RBP10.4□□□□□ -0.74
PHGDH-218ENST00000641491 MARVELD1Q9BSK0 173 aa10.4□□□□□ -0.74
PHGDH-218ENST00000641491 NPFFR1Q9GZQ6 430 aa10.4□□□□□ -0.74
PHGDH-218ENST00000641491 SOX21Q9Y651 276 aaPredicted RBP10.4□□□□□ -0.74
PHGDH-218ENST00000641491 DNAJC9-AS1A6NH13 148 aa10.39□□□□□ -0.75
PHGDH-218ENST00000641491 FAM25EA8MYX2 175 aa10.39□□□□□ -0.75
PHGDH-218ENST00000641491 SLC25A17O43808 307 aa10.39□□□□□ -0.75
PHGDH-218ENST00000641491 OR2A4O95047 310 aa10.39□□□□□ -0.75
PHGDH-218ENST00000641491 UCP1P25874 307 aa10.39□□□□□ -0.75
PHGDH-218ENST00000641491 LINC00205P59089 165 aa10.39□□□□□ -0.75
PHGDH-218ENST00000641491 UBE2KP61086 200 aa10.39□□□□□ -0.75
PHGDH-218ENST00000641491 GNB1P62873 340 aa10.39□□□□□ -0.75
PHGDH-218ENST00000641491 EIF4EBP1Q13541 118 aaPredicted RBP10.39□□□□□ -0.75
PHGDH-218ENST00000641491 TATDN3Q17R31 274 aa10.39□□□□□ -0.75
PHGDH-218ENST00000641491 FAM219AQ8IW50 185 aa10.39□□□□□ -0.75
PHGDH-218ENST00000641491 MRPL41Q8IXM3 137 aaKnown RBP10.39□□□□□ -0.75
PHGDH-218ENST00000641491 C12orf45Q8N5I9 185 aaPredicted RBP10.39□□□□□ -0.75
PHGDH-218ENST00000641491 OR4A5Q8NH83 315 aa10.39□□□□□ -0.75
PHGDH-218ENST00000641491 CHPT1Q8WUD6 406 aa10.39□□□□□ -0.75
PHGDH-218ENST00000641491 RHOVQ96L33 236 aa10.39□□□□□ -0.75
PHGDH-218ENST00000641491 DUX5Q96PT3 197 aa10.39□□□□□ -0.75
PHGDH-218ENST00000641491 OR2A7Q96R45 310 aa10.39□□□□□ -0.75
PHGDH-218ENST00000641491 CLCC1Q96S66 551 aa10.39□□□□□ -0.75
PHGDH-218ENST00000641491 SEC22CQ9BRL7 303 aa10.39□□□□□ -0.75
PHGDH-218ENST00000641491 CACFD1Q9UGQ2 172 aa10.39□□□□□ -0.75
PHGDH-218ENST00000641491 SNRPGP15A8MWD9 76 aa10.38□□□□□ -0.75
PHGDH-218ENST00000641491 RRHO14718 337 aa10.38□□□□□ -0.75
PHGDH-218ENST00000641491 FGF16O43320 207 aa10.38□□□□□ -0.75
PHGDH-218ENST00000641491 PROP1O75360 226 aa10.38□□□□□ -0.75
PHGDH-218ENST00000641491 G6PCP35575 357 aa10.38□□□□□ -0.75
PHGDH-218ENST00000641491 HILS1P60008 231 aa10.38□□□□□ -0.75
PHGDH-218ENST00000641491 TMEM187Q14656 261 aa10.38□□□□□ -0.75
PHGDH-218ENST00000641491 OXA1LQ15070 435 aa10.38□□□□□ -0.75
PHGDH-218ENST00000641491 AJUBAQ96IF1 538 aa10.38□□□□□ -0.75
PHGDH-218ENST00000641491 ZNF48Q96MX3 618 aaPredicted RBP10.38□□□□□ -0.75
PHGDH-218ENST00000641491 RANBP3Q9H6Z4 567 aaPredicted RBP10.38□□□□□ -0.75
PHGDH-218ENST00000641491 ENY2Q9NPA8 101 aa10.38□□□□□ -0.75
PHGDH-218ENST00000641491 TMEM140Q9NV12 185 aa10.38□□□□□ -0.75
PHGDH-218ENST00000641491 FKBP11Q9NYL4 201 aa10.38□□□□□ -0.75
PHGDH-218ENST00000641491 TMED3Q9Y3Q3 217 aa10.38□□□□□ -0.75
PHGDH-218ENST00000641491 A0A0B4J2A0 478 aa10.37□□□□□ -0.75
PHGDH-218ENST00000641491 C5orf51A6NDU8 294 aa10.37□□□□□ -0.75
PHGDH-218ENST00000641491 A6NDX4 124 aa10.37□□□□□ -0.75
PHGDH-218ENST00000641491 FAM90A9PA6NNJ1 464 aa10.37□□□□□ -0.75
PHGDH-218ENST00000641491 KCNAB3O43448 404 aa10.37□□□□□ -0.75
PHGDH-218ENST00000641491 CDS2O95674 445 aa10.37□□□□□ -0.75
PHGDH-218ENST00000641491 HOXB5P09067 269 aa10.37□□□□□ -0.75
PHGDH-218ENST00000641491 SAA1P0DJI8 122 aaPredicted RBP10.37□□□□□ -0.75
PHGDH-218ENST00000641491 VSIG10L2P0DP72 767 aa10.37□□□□□ -0.75
PHGDH-218ENST00000641491 SPNP16150 400 aa10.37□□□□□ -0.75
PHGDH-218ENST00000641491 VDAC1P21796 283 aa10.37□□□□□ -0.75
PHGDH-218ENST00000641491 MECP2P51608 486 aaKnown RBP10.37□□□□□ -0.75
PHGDH-218ENST00000641491 EBI3Q14213 229 aa10.37□□□□□ -0.75
PHGDH-218ENST00000641491 PSG5Q15238 335 aa10.37□□□□□ -0.75
PHGDH-218ENST00000641491 MMD2Q8IY49 270 aa10.37□□□□□ -0.75
PHGDH-218ENST00000641491 SLC35G3Q8N808 338 aa10.37□□□□□ -0.75
PHGDH-218ENST00000641491 TEX45Q8NA69 505 aa10.37□□□□□ -0.75
PHGDH-218ENST00000641491 OR52B4Q8NGK2 314 aa10.37□□□□□ -0.75
PHGDH-218ENST00000641491 OR1S1Q8NH92 325 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms