RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 CCNB1IP1Q9NPC3 277 aa-2.44□□□□□ -2.8
LMBR1-222ENST00000638959 ZC4H2Q9NQZ6 224 aa-2.44□□□□□ -2.8
LMBR1-222ENST00000638959 HYPKQ9NX55 129 aa-2.44□□□□□ -2.8
LMBR1-222ENST00000638959 MAT2BQ9NZL9 334 aa-2.44□□□□□ -2.8
LMBR1-222ENST00000638959 RNF11Q9Y3C5 154 aa-2.44□□□□□ -2.8
LMBR1-222ENST00000638959 RBBP6Q7Z6E9 1792 aaKnown RBP-2.44□□□□□ -2.8
LMBR1-222ENST00000638959 KIAA1109Q2LD37 5005 aa-2.44□□□□□ -2.8
LMBR1-222ENST00000638959 SPTBP11277 2137 aa-2.45□□□□□ -2.8
LMBR1-222ENST00000638959 HEATR9A2RTY3 570 aa-2.45□□□□□ -2.8
LMBR1-222ENST00000638959 K7EPI3 171 aa-2.45□□□□□ -2.8
LMBR1-222ENST00000638959 ZNF593O00488 134 aaPredicted RBP-2.45□□□□□ -2.8
LMBR1-222ENST00000638959 ERLIN1O75477 346 aa-2.45□□□□□ -2.8
LMBR1-222ENST00000638959 IGLV3-27P01718 113 aa-2.45□□□□□ -2.8
LMBR1-222ENST00000638959 FKBP2P26885 142 aaKnown RBP-2.45□□□□□ -2.8
LMBR1-222ENST00000638959 DNASE1L1P49184 302 aa-2.45□□□□□ -2.8
LMBR1-222ENST00000638959 LINC00313P59037 77 aa-2.45□□□□□ -2.8
LMBR1-222ENST00000638959 COX6A2Q02221 97 aa-2.45□□□□□ -2.8
LMBR1-222ENST00000638959 PRDX1Q06830 199 aaKnown RBP-2.45□□□□□ -2.8
LMBR1-222ENST00000638959 LCN15Q6UWW0 184 aa-2.45□□□□□ -2.8
LMBR1-222ENST00000638959 BZW1Q7L1Q6 419 aaKnown RBP-2.45□□□□□ -2.8
LMBR1-222ENST00000638959 TMEM75Q8N9X5 138 aa-2.45□□□□□ -2.8
LMBR1-222ENST00000638959 CA5BP1Q8WTZ4 195 aa-2.45□□□□□ -2.8
LMBR1-222ENST00000638959 RNASE6Q93091 150 aaKnown RBP-2.45□□□□□ -2.8
LMBR1-222ENST00000638959 MED28Q9H204 178 aa-2.45□□□□□ -2.8
LMBR1-222ENST00000638959 ODF2LQ9ULJ1 636 aa-2.45□□□□□ -2.8
LMBR1-222ENST00000638959 TIMM22Q9Y584 194 aa-2.45□□□□□ -2.8
LMBR1-222ENST00000638959 NUP160Q12769 1436 aa-2.45□□□□□ -2.8
LMBR1-222ENST00000638959 AKAP6Q13023 2319 aa-2.46□□□□□ -2.8
LMBR1-222ENST00000638959 RTL1A6NKG5 1358 aa-2.46□□□□□ -2.8
LMBR1-222ENST00000638959 C8orf87E5RJ46 101 aa-2.46□□□□□ -2.8
LMBR1-222ENST00000638959 CCL16O15467 120 aa-2.46□□□□□ -2.8
LMBR1-222ENST00000638959 GSTZ1O43708 216 aaPredicted RBP-2.46□□□□□ -2.8
LMBR1-222ENST00000638959 NUPR1O60356 82 aa-2.46□□□□□ -2.8
LMBR1-222ENST00000638959 TRAPPC6AO75865 159 aa-2.46□□□□□ -2.8
LMBR1-222ENST00000638959 RHOGP84095 191 aa-2.46□□□□□ -2.8
LMBR1-222ENST00000638959 STX5Q13190 355 aa-2.46□□□□□ -2.8
LMBR1-222ENST00000638959 CLEC12BQ2HXU8 276 aa-2.46□□□□□ -2.8
LMBR1-222ENST00000638959 PLCXD3Q63HM9 321 aa-2.46□□□□□ -2.8
LMBR1-222ENST00000638959 FAM122BQ7Z309 247 aa-2.46□□□□□ -2.8
LMBR1-222ENST00000638959 PLCZ1Q86YW0 608 aa-2.46□□□□□ -2.8
LMBR1-222ENST00000638959 ATPAF2Q8N5M1 289 aa-2.46□□□□□ -2.8
LMBR1-222ENST00000638959 TRAM1L1Q8N609 369 aa-2.46□□□□□ -2.8
LMBR1-222ENST00000638959 OR4D11Q8NGI4 311 aa-2.46□□□□□ -2.8
LMBR1-222ENST00000638959 NRGNQ92686 78 aa-2.46□□□□□ -2.8
LMBR1-222ENST00000638959 ZMYND19Q96E35 227 aaPredicted RBP-2.46□□□□□ -2.8
LMBR1-222ENST00000638959 HINT2Q9BX68 163 aa-2.46□□□□□ -2.8
LMBR1-222ENST00000638959 OR2AG1Q9H205 316 aa-2.46□□□□□ -2.8
LMBR1-222ENST00000638959 BCL9O00512 1426 aa-2.46□□□□□ -2.8
LMBR1-222ENST00000638959 IGHV1-58A0A0C4DH39 117 aa-2.47□□□□□ -2.8
LMBR1-222ENST00000638959 RNF13O43567 381 aa-2.47□□□□□ -2.8
LMBR1-222ENST00000638959 GIMD1P0DJR0 217 aa-2.47□□□□□ -2.8
LMBR1-222ENST00000638959 IFNAR2P48551 515 aa-2.47□□□□□ -2.8
LMBR1-222ENST00000638959 RPL31P62899 125 aaKnown RBP-2.47□□□□□ -2.8
LMBR1-222ENST00000638959 DNAJC3Q13217 504 aa-2.47□□□□□ -2.8
LMBR1-222ENST00000638959 TBC1D19Q8N5T2 526 aa-2.47□□□□□ -2.8
LMBR1-222ENST00000638959 OR51A7Q8NH64 312 aa-2.47□□□□□ -2.8
LMBR1-222ENST00000638959 PLEKHB2Q96CS7 222 aa-2.47□□□□□ -2.8
LMBR1-222ENST00000638959 ARMC7Q9H6L4 198 aa-2.47□□□□□ -2.8
LMBR1-222ENST00000638959 SIVA1O15304 175 aa-2.48□□□□□ -2.81
LMBR1-222ENST00000638959 HSBP1O75506 76 aa-2.48□□□□□ -2.81
LMBR1-222ENST00000638959 CA7P43166 264 aa-2.48□□□□□ -2.81
LMBR1-222ENST00000638959 SSR2P43308 183 aa-2.48□□□□□ -2.81
LMBR1-222ENST00000638959 IL24Q13007 206 aa-2.48□□□□□ -2.81
LMBR1-222ENST00000638959 C4orf26Q17RF5 130 aa-2.48□□□□□ -2.81
LMBR1-222ENST00000638959 FAM162BQ5T6X4 162 aa-2.48□□□□□ -2.81
LMBR1-222ENST00000638959 Q6ZQY7 126 aa-2.48□□□□□ -2.81
LMBR1-222ENST00000638959 OFCC1Q8IZS5 231 aa-2.48□□□□□ -2.81
LMBR1-222ENST00000638959 DYNC2LI1Q8TCX1 351 aa-2.48□□□□□ -2.81
LMBR1-222ENST00000638959 RASSF5Q8WWW0 418 aa-2.48□□□□□ -2.81
LMBR1-222ENST00000638959 NT5C3BQ969T7 300 aa-2.48□□□□□ -2.81
LMBR1-222ENST00000638959 ISOC2Q96AB3 205 aa-2.48□□□□□ -2.81
LMBR1-222ENST00000638959 BLZF1Q9H2G9 400 aa-2.48□□□□□ -2.81
LMBR1-222ENST00000638959 PSTPIP2Q9H939 334 aa-2.48□□□□□ -2.81
LMBR1-222ENST00000638959 TMEM216Q9P0N5 145 aa-2.48□□□□□ -2.81
LMBR1-222ENST00000638959 LINC00527Q9UJ94 153 aa-2.48□□□□□ -2.81
LMBR1-222ENST00000638959 SETD2Q9BYW2 2564 aaPredicted RBP-2.48□□□□□ -2.81
LMBR1-222ENST00000638959 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP-2.49□□□□□ -2.81
LMBR1-222ENST00000638959 DOCK4Q8N1I0 1966 aa-2.49□□□□□ -2.81
LMBR1-222ENST00000638959 PKHD1P08F94 4074 aa-2.49□□□□□ -2.81
LMBR1-222ENST00000638959 TRAV12-1A0A0B4J245 112 aa-2.49□□□□□ -2.81
LMBR1-222ENST00000638959 H0YCG3 227 aa-2.49□□□□□ -2.81
LMBR1-222ENST00000638959 CRXO43186 299 aaPredicted RBP-2.49□□□□□ -2.81
LMBR1-222ENST00000638959 UBL3O95164 117 aa-2.49□□□□□ -2.81
LMBR1-222ENST00000638959 EPPINO95925 133 aa-2.49□□□□□ -2.81
LMBR1-222ENST00000638959 CLPSP04118 112 aa-2.49□□□□□ -2.81
LMBR1-222ENST00000638959 UBCP0CG48 685 aaKnown RBP-2.49□□□□□ -2.81
LMBR1-222ENST00000638959 NFYAP23511 347 aaPredicted RBP-2.49□□□□□ -2.81
LMBR1-222ENST00000638959 GADD45AP24522 165 aa-2.49□□□□□ -2.81
LMBR1-222ENST00000638959 TAS2R60P59551 318 aa-2.49□□□□□ -2.81
LMBR1-222ENST00000638959 TSPAN5P62079 268 aa-2.49□□□□□ -2.81
LMBR1-222ENST00000638959 TBPL1P62380 186 aa-2.49□□□□□ -2.81
LMBR1-222ENST00000638959 SLC35B1P78383 322 aa-2.49□□□□□ -2.81
LMBR1-222ENST00000638959 OR4D1Q15615 310 aa-2.49□□□□□ -2.81
LMBR1-222ENST00000638959 ALKBH6Q3KRA9 238 aa-2.49□□□□□ -2.81
LMBR1-222ENST00000638959 LRRC23Q53EV4 343 aaPredicted RBP-2.49□□□□□ -2.81
LMBR1-222ENST00000638959 CENPWQ5EE01 88 aa-2.49□□□□□ -2.81
LMBR1-222ENST00000638959 SCD5Q86SK9 330 aa-2.49□□□□□ -2.81
LMBR1-222ENST00000638959 OR5B17Q8NGF7 314 aa-2.49□□□□□ -2.81
LMBR1-222ENST00000638959 OR7D2Q96RA2 312 aa-2.49□□□□□ -2.81
LMBR1-222ENST00000638959 OR51B6Q9H340 312 aa-2.49□□□□□ -2.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms