RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 RPRMQ9NS64 109 aa12.18□□□□□ -0.46
SCARB2-208ENST00000638372 METTL1Q9UBP6 276 aaKnown RBP12.18□□□□□ -0.46
SCARB2-208ENST00000638372 WASHC3Q9Y3C0 194 aa12.18□□□□□ -0.46
SCARB2-208ENST00000638372 MPDU1O75352 247 aa12.17□□□□□ -0.46
SCARB2-208ENST00000638372 HYPMO75409 117 aa12.17□□□□□ -0.46
SCARB2-208ENST00000638372 CLPSP04118 112 aa12.17□□□□□ -0.46
SCARB2-208ENST00000638372 CEACAM1P13688 526 aa12.17□□□□□ -0.46
SCARB2-208ENST00000638372 WDR73Q6P4I2 378 aa12.17□□□□□ -0.46
SCARB2-208ENST00000638372 DPPA3Q6W0C5 159 aa12.17□□□□□ -0.46
SCARB2-208ENST00000638372 ACP7Q6ZNF0 438 aa12.17□□□□□ -0.46
SCARB2-208ENST00000638372 C16orf82Q7Z2V1 217 aa12.17□□□□□ -0.46
SCARB2-208ENST00000638372 IFT22Q9H7X7 185 aa12.17□□□□□ -0.46
SCARB2-208ENST00000638372 IGSF23A1L1A6 192 aa12.17□□□□□ -0.46
SCARB2-208ENST00000638372 RNF222A6NCQ9 220 aa12.17□□□□□ -0.46
SCARB2-208ENST00000638372 FAM90A26D6RGX4 464 aa12.17□□□□□ -0.46
SCARB2-208ENST00000638372 DANCRP0C864 163 aa12.17□□□□□ -0.46
SCARB2-208ENST00000638372 SLC35E4Q6ICL7 350 aa12.17□□□□□ -0.46
SCARB2-208ENST00000638372 FAM216BQ8N7L0 139 aa12.17□□□□□ -0.46
SCARB2-208ENST00000638372 GRAMD2BQ96HH9 432 aa12.17□□□□□ -0.46
SCARB2-208ENST00000638372 IGHV2OR16-5A0A0B4J2B6 119 aa12.17□□□□□ -0.46
SCARB2-208ENST00000638372 F5H697 171 aa12.17□□□□□ -0.46
SCARB2-208ENST00000638372 REG1AP05451 166 aa12.17□□□□□ -0.46
SCARB2-208ENST00000638372 MUC15Q8N387 334 aa12.17□□□□□ -0.46
SCARB2-208ENST00000638372 C5orf17Q8NAS9 161 aa12.17□□□□□ -0.46
SCARB2-208ENST00000638372 OR13A1Q8NGR1 328 aa12.17□□□□□ -0.46
SCARB2-208ENST00000638372 PLXNA3P51805 1871 aa12.17□□□□□ -0.46
SCARB2-208ENST00000638372 ORM1P02763 201 aa12.17□□□□□ -0.46
SCARB2-208ENST00000638372 LSM10Q969L4 123 aaKnown RBP12.17□□□□□ -0.46
SCARB2-208ENST00000638372 STARD4Q96DR4 205 aa12.17□□□□□ -0.46
SCARB2-208ENST00000638372 IGKV1D-8A0A087WSZ0 117 aa12.16□□□□□ -0.46
SCARB2-208ENST00000638372 DNASE2O00115 360 aaPredicted RBP12.16□□□□□ -0.46
SCARB2-208ENST00000638372 FAM3BP58499 235 aaPredicted RBP12.16□□□□□ -0.46
SCARB2-208ENST00000638372 OR5AU1Q8NGC0 362 aa12.16□□□□□ -0.46
SCARB2-208ENST00000638372 LILRB1Q8NHL6 650 aaPredicted RBP12.16□□□□□ -0.46
SCARB2-208ENST00000638372 PACRGQ96M98 296 aaPredicted RBP12.16□□□□□ -0.46
SCARB2-208ENST00000638372 WDR87Q6ZQQ6 2873 aa12.16□□□□□ -0.46
SCARB2-208ENST00000638372 TRAV14DV4A0A0A6YYC5 116 aa12.16□□□□□ -0.46
SCARB2-208ENST00000638372 PPIAL4CA0A0B4J2A2 164 aa12.16□□□□□ -0.46
SCARB2-208ENST00000638372 HSPB1P04792 205 aaKnown RBP12.16□□□□□ -0.46
SCARB2-208ENST00000638372 PPIAL4GP0DN37 164 aa12.16□□□□□ -0.46
SCARB2-208ENST00000638372 HIST3H3Q16695 136 aa12.16□□□□□ -0.46
SCARB2-208ENST00000638372 MMD2Q8IY49 270 aa12.16□□□□□ -0.46
SCARB2-208ENST00000638372 UCP1P25874 307 aa12.16□□□□□ -0.46
SCARB2-208ENST00000638372 CD40P25942 277 aa12.16□□□□□ -0.46
SCARB2-208ENST00000638372 OR1L6Q8NGR2 347 aa12.16□□□□□ -0.46
SCARB2-208ENST00000638372 MRPS18CQ9Y3D5 142 aaKnown RBP12.16□□□□□ -0.46
SCARB2-208ENST00000638372 SCN8AQ9UQD0 1980 aa12.16□□□□□ -0.46
SCARB2-208ENST00000638372 KBTBD11O94819 623 aa12.16□□□□□ -0.46
SCARB2-208ENST00000638372 TFF1P04155 84 aa12.16□□□□□ -0.46
SCARB2-208ENST00000638372 EGR1P18146 543 aa12.16□□□□□ -0.46
SCARB2-208ENST00000638372 ZNF137PP52743 207 aa12.16□□□□□ -0.46
SCARB2-208ENST00000638372 ZCCHC24Q8N2G6 241 aaKnown RBP12.16□□□□□ -0.46
SCARB2-208ENST00000638372 EAF1Q96JC9 268 aaPredicted RBP12.16□□□□□ -0.46
SCARB2-208ENST00000638372 GUCD1Q96NT3 240 aa12.16□□□□□ -0.46
SCARB2-208ENST00000638372 RSPO3Q9BXY4 272 aaPredicted RBP12.16□□□□□ -0.46
SCARB2-208ENST00000638372 UFC1Q9Y3C8 167 aa12.16□□□□□ -0.46
SCARB2-208ENST00000638372 MFAP2P55001 183 aa12.15□□□□□ -0.46
SCARB2-208ENST00000638372 IGHV1-69-2A0A0G2JMI3 117 aa12.15□□□□□ -0.46
SCARB2-208ENST00000638372 C5orf63A6NC05 138 aa12.15□□□□□ -0.46
SCARB2-208ENST00000638372 C17orf98A8MV24 154 aa12.15□□□□□ -0.46
SCARB2-208ENST00000638372 TRGC2P03986 189 aa12.15□□□□□ -0.46
SCARB2-208ENST00000638372 SRP14P37108 136 aaKnown RBP12.15□□□□□ -0.46
SCARB2-208ENST00000638372 HLA-DRB5Q30154 266 aa12.15□□□□□ -0.46
SCARB2-208ENST00000638372 WDR25Q64LD2 544 aaPredicted RBP12.15□□□□□ -0.46
SCARB2-208ENST00000638372 A0A0A6YYD4 124 aa12.15□□□□□ -0.46
SCARB2-208ENST00000638372 IGKV1D-13A0A0B4J2D9 117 aa12.15□□□□□ -0.46
SCARB2-208ENST00000638372 PQLC2LA1A4F0 135 aa12.15□□□□□ -0.46
SCARB2-208ENST00000638372 NDUFA2O43678 99 aa12.15□□□□□ -0.46
SCARB2-208ENST00000638372 OR5AL1P0C617 328 aa12.15□□□□□ -0.46
SCARB2-208ENST00000638372 IGKV1-13P0DP09 117 aa12.15□□□□□ -0.46
SCARB2-208ENST00000638372 HNRNPA3P51991 378 aaKnown RBP12.15□□□□□ -0.46
SCARB2-208ENST00000638372 POM121Q96HA1 1249 aa12.15□□□□□ -0.46
SCARB2-208ENST00000638372 NHLH1Q02575 133 aa12.14□□□□□ -0.47
SCARB2-208ENST00000638372 LY6G6FQ5SQ64 297 aa12.14□□□□□ -0.47
SCARB2-208ENST00000638372 QTRT1Q9BXR0 403 aaKnown RBP12.14□□□□□ -0.47
SCARB2-208ENST00000638372 ZNF729A6NN14 1252 aaPredicted RBP12.14□□□□□ -0.47
SCARB2-208ENST00000638372 OR9G1Q8NH87 305 aa12.14□□□□□ -0.47
SCARB2-208ENST00000638372 DPF1Q92782 380 aa12.14□□□□□ -0.47
SCARB2-208ENST00000638372 SMIM8Q96KF7 97 aa12.14□□□□□ -0.47
SCARB2-208ENST00000638372 SCNM1Q9BWG6 230 aa12.14□□□□□ -0.47
SCARB2-208ENST00000638372 HIGD1AQ9Y241 93 aa12.14□□□□□ -0.47
SCARB2-208ENST00000638372 SFTPCP11686 197 aa12.14□□□□□ -0.47
SCARB2-208ENST00000638372 CCL1P22362 96 aa12.14□□□□□ -0.47
SCARB2-208ENST00000638372 PLPPR1Q8TBJ4 325 aa12.14□□□□□ -0.47
SCARB2-208ENST00000638372 FBLN5Q9UBX5 448 aa12.14□□□□□ -0.47
SCARB2-208ENST00000638372 H3BTX0 84 aa12.14□□□□□ -0.47
SCARB2-208ENST00000638372 VAMP3Q15836 100 aa12.14□□□□□ -0.47
SCARB2-208ENST00000638372 GGNQ86UU5 652 aa12.14□□□□□ -0.47
SCARB2-208ENST00000638372 SGK494Q96LW2 274 aa12.14□□□□□ -0.47
SCARB2-208ENST00000638372 IGKV1-12A0A0C4DH73 117 aa12.13□□□□□ -0.47
SCARB2-208ENST00000638372 IFNL4K9M1U5 179 aa12.13□□□□□ -0.47
SCARB2-208ENST00000638372 IGKV1D-12P01611 117 aa12.13□□□□□ -0.47
SCARB2-208ENST00000638372 OR4C13Q8NGP0 309 aa12.13□□□□□ -0.47
SCARB2-208ENST00000638372 MIOXQ9UGB7 285 aa12.13□□□□□ -0.47
SCARB2-208ENST00000638372 FOXD3Q9UJU5 478 aaPredicted RBP12.13□□□□□ -0.47
SCARB2-208ENST00000638372 IGHV3-35A0A0C4DH35 117 aa12.13□□□□□ -0.47
SCARB2-208ENST00000638372 ZNF735P0CB33 412 aa12.13□□□□□ -0.47
SCARB2-208ENST00000638372 HTN1P15515 57 aa12.13□□□□□ -0.47
SCARB2-208ENST00000638372 SELENOTP62341 195 aa12.13□□□□□ -0.47
SCARB2-208ENST00000638372 RNF144BQ7Z419 303 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms