RNA–Protein interactions for RNA: ENST00000636183.1

CLN5-208, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLN5, Length 6,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-208ENST00000636183 MUC21A0A140T8X8 626 aa13.72□□□□□ -0.21
CLN5-208ENST00000636183 DIRC3C9JPN6 131 aa13.72□□□□□ -0.21
CLN5-208ENST00000636183 CA2P00918 260 aa13.72□□□□□ -0.21
CLN5-208ENST00000636183 RPL39P5Q59GN2 51 aa13.72□□□□□ -0.21
CLN5-208ENST00000636183 MUC21Q5SSG8 566 aa13.72□□□□□ -0.21
CLN5-208ENST00000636183 RFLNBQ8N5W9 214 aa13.72□□□□□ -0.21
CLN5-208ENST00000636183 OR51M1Q9H341 326 aa13.72□□□□□ -0.21
CLN5-208ENST00000636183 C2orf88Q9BSF0 95 aa13.72□□□□□ -0.21
CLN5-208ENST00000636183 FOXB2Q5VYV0 432 aa13.72□□□□□ -0.21
CLN5-208ENST00000636183 ABHD1Q96SE0 405 aa13.72□□□□□ -0.21
CLN5-208ENST00000636183 A0A1W2PP11 408 aa13.72□□□□□ -0.21
CLN5-208ENST00000636183 THBDP07204 575 aa13.72□□□□□ -0.21
CLN5-208ENST00000636183 GLRXP35754 106 aa13.72□□□□□ -0.21
CLN5-208ENST00000636183 PLXNB2O15031 1838 aa13.72□□□□□ -0.21
CLN5-208ENST00000636183 C7orf71A4D174 169 aa13.72□□□□□ -0.21
CLN5-208ENST00000636183 GALP22466 123 aa13.72□□□□□ -0.21
CLN5-208ENST00000636183 JPT1Q9UK76 154 aa13.72□□□□□ -0.21
CLN5-208ENST00000636183 A6NDN8 102 aa13.71□□□□□ -0.21
CLN5-208ENST00000636183 C10orf128Q5T292 105 aa13.71□□□□□ -0.21
CLN5-208ENST00000636183 ABLIM2Q6H8Q1 611 aa13.71□□□□□ -0.21
CLN5-208ENST00000636183 LURAP1LQ8IV03 231 aa13.71□□□□□ -0.21
CLN5-208ENST00000636183 ZCCHC24Q8N2G6 241 aaKnown RBP13.71□□□□□ -0.21
CLN5-208ENST00000636183 FAM216BQ8N7L0 139 aa13.71□□□□□ -0.21
CLN5-208ENST00000636183 FAM110DQ8TAY7 271 aaPredicted RBP13.71□□□□□ -0.21
CLN5-208ENST00000636183 TMEM218A2RU14 115 aa13.71□□□□□ -0.21
CLN5-208ENST00000636183 PQLC2Q6ZP29 291 aa13.71□□□□□ -0.21
CLN5-208ENST00000636183 TMEM170BQ5T4T1 132 aa13.71□□□□□ -0.21
CLN5-208ENST00000636183 SLC25A47Q6Q0C1 308 aa13.71□□□□□ -0.21
CLN5-208ENST00000636183 HKR1P10072 659 aa13.71□□□□□ -0.21
CLN5-208ENST00000636183 RUNX1Q01196 453 aa13.71□□□□□ -0.21
CLN5-208ENST00000636183 SAMD13Q5VXD3 122 aa13.71□□□□□ -0.21
CLN5-208ENST00000636183 DTX2Q86UW9 622 aa13.71□□□□□ -0.21
CLN5-208ENST00000636183 HOGA1Q86XE5 327 aa13.71□□□□□ -0.21
CLN5-208ENST00000636183 ISOC2Q96AB3 205 aa13.71□□□□□ -0.21
CLN5-208ENST00000636183 HIST1H4GQ99525 98 aa13.71□□□□□ -0.21
CLN5-208ENST00000636183 TRPM3Q9HCF6 1732 aaPredicted RBP13.71□□□□□ -0.21
CLN5-208ENST00000636183 NDUFB4O95168 129 aa13.71□□□□□ -0.22
CLN5-208ENST00000636183 CGB7P0DN87 165 aa13.71□□□□□ -0.22
CLN5-208ENST00000636183 CSRP1P21291 193 aaKnown RBP13.71□□□□□ -0.22
CLN5-208ENST00000636183 ZIC4Q8N9L1 334 aa13.71□□□□□ -0.22
CLN5-208ENST00000636183 MRAPQ8TCY5 172 aa13.71□□□□□ -0.22
CLN5-208ENST00000636183 LMX1BO60663 402 aa13.71□□□□□ -0.22
CLN5-208ENST00000636183 TMEM42Q69YG0 159 aa13.71□□□□□ -0.22
CLN5-208ENST00000636183 XAF1Q6GPH4 301 aa13.71□□□□□ -0.22
CLN5-208ENST00000636183 Q6ZNX1 250 aa13.71□□□□□ -0.22
CLN5-208ENST00000636183 FGFRL1Q8N441 504 aa13.71□□□□□ -0.22
CLN5-208ENST00000636183 C12orf57Q99622 126 aa13.71□□□□□ -0.22
CLN5-208ENST00000636183 MMP16P51512 607 aa13.7□□□□□ -0.22
CLN5-208ENST00000636183 TMEM167AQ8TBQ9 72 aa13.7□□□□□ -0.22
CLN5-208ENST00000636183 STRCQ7RTU9 1775 aa13.7□□□□□ -0.22
CLN5-208ENST00000636183 C1QL2Q7Z5L3 287 aa13.7□□□□□ -0.22
CLN5-208ENST00000636183 ZNF383Q8NA42 475 aa13.7□□□□□ -0.22
CLN5-208ENST00000636183 OR51G1Q8NGK1 321 aa13.7□□□□□ -0.22
CLN5-208ENST00000636183 LINC00470Q9BZP3 86 aa13.7□□□□□ -0.22
CLN5-208ENST00000636183 PILRAQ9UKJ1 303 aa13.7□□□□□ -0.22
CLN5-208ENST00000636183 ZNF883P0CG24 379 aa13.7□□□□□ -0.22
CLN5-208ENST00000636183 RPS20P60866 119 aaKnown RBP13.7□□□□□ -0.22
CLN5-208ENST00000636183 HSPE1P61604 102 aaKnown RBP13.7□□□□□ -0.22
CLN5-208ENST00000636183 PNRC1Q12796 327 aaPredicted RBP13.7□□□□□ -0.22
CLN5-208ENST00000636183 POLR2AP24928 1970 aaKnown RBP13.7□□□□□ -0.22
CLN5-208ENST00000636183 TRBV20OR9-2A0A075B6H5 130 aa13.7□□□□□ -0.22
CLN5-208ENST00000636183 IGKV1-8A0A0C4DH67 115 aa13.7□□□□□ -0.22
CLN5-208ENST00000636183 EIF3GO75821 320 aaKnown RBP eCLIP13.7□□□□□ -0.22
CLN5-208ENST00000636183 ASAH2BP0C7U1 165 aa13.7□□□□□ -0.22
CLN5-208ENST00000636183 ASIPP42127 132 aa13.7□□□□□ -0.22
CLN5-208ENST00000636183 EGR1P18146 543 aa13.7□□□□□ -0.22
CLN5-208ENST00000636183 VN1R17PQ8TDU5 208 aa13.7□□□□□ -0.22
CLN5-208ENST00000636183 PKIBQ9C010 78 aa13.7□□□□□ -0.22
CLN5-208ENST00000636183 TJP1Q07157 1748 aa13.69□□□□□ -0.22
CLN5-208ENST00000636183 CDS2O95674 445 aa13.69□□□□□ -0.22
CLN5-208ENST00000636183 NPBWR2P48146 333 aa13.69□□□□□ -0.22
CLN5-208ENST00000636183 MAPK1IP1LQ8NDC0 245 aa13.69□□□□□ -0.22
CLN5-208ENST00000636183 PGLYRP1O75594 196 aaPredicted RBP13.69□□□□□ -0.22
CLN5-208ENST00000636183 C9orf106Q8NAJ2 232 aa13.69□□□□□ -0.22
CLN5-208ENST00000636183 H7C1H1 209 aa13.69□□□□□ -0.22
CLN5-208ENST00000636183 COX19Q49B96 90 aa13.69□□□□□ -0.22
CLN5-208ENST00000636183 SP5Q6BEB4 398 aaPredicted RBP13.69□□□□□ -0.22
CLN5-208ENST00000636183 H0Y980 276 aa13.69□□□□□ -0.22
CLN5-208ENST00000636183 LINC00305Q7Z4B0 112 aa13.69□□□□□ -0.22
CLN5-208ENST00000636183 OR5AN1Q8NGI8 311 aa13.69□□□□□ -0.22
CLN5-208ENST00000636183 A0A0G2JMM0 328 aa13.69□□□□□ -0.22
CLN5-208ENST00000636183 TRBV7-9A0A0J9YWB2 115 aa13.69□□□□□ -0.22
CLN5-208ENST00000636183 A0A1W2PPB8 328 aa13.69□□□□□ -0.22
CLN5-208ENST00000636183 A0A1W2PRS3 328 aa13.69□□□□□ -0.22
CLN5-208ENST00000636183 MARCH11A6NNE9 402 aa13.69□□□□□ -0.22
CLN5-208ENST00000636183 KIR3DP1A8MWS1 328 aa13.69□□□□□ -0.22
CLN5-208ENST00000636183 PITX3O75364 302 aa13.69□□□□□ -0.22
CLN5-208ENST00000636183 MUC1P15941 1255 aaPredicted RBP13.69□□□□□ -0.22
CLN5-208ENST00000636183 ZNF25P17030 456 aaPredicted RBP13.69□□□□□ -0.22
CLN5-208ENST00000636183 ATP6V0CP27449 155 aa13.69□□□□□ -0.22
CLN5-208ENST00000636183 HMGA2P52926 109 aa13.69□□□□□ -0.22
CLN5-208ENST00000636183 F11RQ9Y624 299 aaKnown RBP13.69□□□□□ -0.22
CLN5-208ENST00000636183 CFDP00746 253 aaPredicted RBP13.68□□□□□ -0.22
CLN5-208ENST00000636183 PTGDSP41222 190 aa13.68□□□□□ -0.22
CLN5-208ENST00000636183 ICAM4Q14773 271 aa13.68□□□□□ -0.22
CLN5-208ENST00000636183 ZNF585BQ52M93 769 aa13.68□□□□□ -0.22
CLN5-208ENST00000636183 CLDND2Q8NHS1 167 aa13.68□□□□□ -0.22
CLN5-208ENST00000636183 BCORQ6W2J9 1755 aa13.68□□□□□ -0.22
CLN5-208ENST00000636183 SNRPEP62304 92 aaKnown RBP13.68□□□□□ -0.22
CLN5-208ENST00000636183 NGFRP08138 427 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms