RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 COPS9Q8WXC6 57 aa10.07□□□□□ -0.8
SHPRH-211ENST00000629427 NPIPB11E5RHQ5 1161 aa10.07□□□□□ -0.8
SHPRH-211ENST00000629427 PTGDSP41222 190 aa10.07□□□□□ -0.8
SHPRH-211ENST00000629427 NUTF2P61970 127 aaKnown RBP10.07□□□□□ -0.8
SHPRH-211ENST00000629427 OR9G1Q8NH87 305 aa10.07□□□□□ -0.8
SHPRH-211ENST00000629427 ITLN2Q8WWU7 325 aaPredicted RBP10.07□□□□□ -0.8
SHPRH-211ENST00000629427 OR51M1Q9H341 326 aa10.07□□□□□ -0.8
SHPRH-211ENST00000629427 TNFSF18Q9UNG2 199 aa10.07□□□□□ -0.8
SHPRH-211ENST00000629427 SCN10AQ9Y5Y9 1956 aa10.06□□□□□ -0.8
SHPRH-211ENST00000629427 LNP1A1A4G5 178 aa10.06□□□□□ -0.8
SHPRH-211ENST00000629427 RBFOX2O43251 390 aaKnown RBP eCLIP10.06□□□□□ -0.82e-7■□□□□ 10.8
SHPRH-211ENST00000629427 AMY1AP04745 511 aa10.06□□□□□ -0.8
SHPRH-211ENST00000629427 NPBWR2P48146 333 aa10.06□□□□□ -0.8
SHPRH-211ENST00000629427 OR13C6PQ8NH95 151 aa10.06□□□□□ -0.8
SHPRH-211ENST00000629427 FAM168AQ92567 244 aa10.06□□□□□ -0.8
SHPRH-211ENST00000629427 TMEM222Q9H0R3 208 aa10.06□□□□□ -0.8
SHPRH-211ENST00000629427 AKIRIN1Q9H9L7 192 aaPredicted RBP10.06□□□□□ -0.8
SHPRH-211ENST00000629427 TCF20Q9UGU0 1960 aaKnown RBP10.06□□□□□ -0.8
SHPRH-211ENST00000629427 MARCH11A6NNE9 402 aa10.06□□□□□ -0.8
SHPRH-211ENST00000629427 H3BTX0 84 aa10.06□□□□□ -0.8
SHPRH-211ENST00000629427 M0QZK8 103 aa10.06□□□□□ -0.8
SHPRH-211ENST00000629427 GGCTO75223 188 aaKnown RBP10.06□□□□□ -0.8
SHPRH-211ENST00000629427 C11orf91Q3C1V1 193 aa10.06□□□□□ -0.8
SHPRH-211ENST00000629427 LHFPL6Q9Y693 200 aa10.06□□□□□ -0.8
SHPRH-211ENST00000629427 LTBP4Q8N2S1 1624 aa10.06□□□□□ -0.8
SHPRH-211ENST00000629427 GLIPR1P48060 266 aa10.06□□□□□ -0.8
SHPRH-211ENST00000629427 HIST1H1AQ02539 215 aaPredicted RBP10.06□□□□□ -0.8
SHPRH-211ENST00000629427 LBHQ53QV2 105 aaPredicted RBP10.06□□□□□ -0.8
SHPRH-211ENST00000629427 GCSAMLQ5JQS6 135 aa10.06□□□□□ -0.8
SHPRH-211ENST00000629427 LHFPL5Q8TAF8 219 aa10.06□□□□□ -0.8
SHPRH-211ENST00000629427 PKIBQ9C010 78 aa10.06□□□□□ -0.8
SHPRH-211ENST00000629427 IGHV3-49A0A0A0MS15 119 aa10.06□□□□□ -0.8
SHPRH-211ENST00000629427 PSMB11A5LHX3 300 aa10.06□□□□□ -0.8
SHPRH-211ENST00000629427 C9JCJ5 164 aa10.06□□□□□ -0.8
SHPRH-211ENST00000629427 UBE2V2Q15819 145 aa10.06□□□□□ -0.8
SHPRH-211ENST00000629427 TNFSF10P50591 281 aa10.06□□□□□ -0.8
SHPRH-211ENST00000629427 RPS20P60866 119 aaKnown RBP10.06□□□□□ -0.8
SHPRH-211ENST00000629427 SIRT4Q9Y6E7 314 aaPredicted RBP10.06□□□□□ -0.8
SHPRH-211ENST00000629427 C17orf51A8MQB3 221 aa10.06□□□□□ -0.8
SHPRH-211ENST00000629427 PRSS23O95084 383 aa10.06□□□□□ -0.8
SHPRH-211ENST00000629427 FAM3BP58499 235 aaPredicted RBP10.06□□□□□ -0.8
SHPRH-211ENST00000629427 TAF15Q92804 592 aaKnown RBP eCLIP10.06□□□□□ -0.8
SHPRH-211ENST00000629427 COL25A1Q9BXS0 654 aaPredicted RBP10.06□□□□□ -0.8
SHPRH-211ENST00000629427 SUMO2P61956 95 aaKnown RBP10.05□□□□□ -0.8
SHPRH-211ENST00000629427 TNFRSF9Q07011 255 aa10.05□□□□□ -0.8
SHPRH-211ENST00000629427 ZNRF1Q8ND25 227 aa10.05□□□□□ -0.8
SHPRH-211ENST00000629427 TMEM186Q96B77 213 aa10.05□□□□□ -0.8
SHPRH-211ENST00000629427 WNT5BQ9H1J7 359 aa10.05□□□□□ -0.8
SHPRH-211ENST00000629427 CFDP00746 253 aaPredicted RBP10.05□□□□□ -0.8
SHPRH-211ENST00000629427 F12P00748 615 aaPredicted RBP10.05□□□□□ -0.8
SHPRH-211ENST00000629427 SELENOHQ8IZQ5 122 aaKnown RBP10.05□□□□□ -0.8
SHPRH-211ENST00000629427 FSTP19883 344 aa10.05□□□□□ -0.8
SHPRH-211ENST00000629427 CD300CQ08708 224 aa10.05□□□□□ -0.8
SHPRH-211ENST00000629427 HSPB9Q9BQS6 159 aa10.05□□□□□ -0.8
SHPRH-211ENST00000629427 FOXI3A8MTJ6 420 aaPredicted RBP10.05□□□□□ -0.8
SHPRH-211ENST00000629427 CTSBP07858 339 aa10.05□□□□□ -0.8
SHPRH-211ENST00000629427 HSPE1P61604 102 aaKnown RBP10.05□□□□□ -0.8
SHPRH-211ENST00000629427 IGHV3OR16-13A0A075B7E8 117 aa10.05□□□□□ -0.8
SHPRH-211ENST00000629427 TRBV5-3A0A0A0MS03 114 aa10.05□□□□□ -0.8
SHPRH-211ENST00000629427 IGHV3-74A0A0B4J1X5 117 aa10.05□□□□□ -0.8
SHPRH-211ENST00000629427 ZG16O60844 167 aa10.05□□□□□ -0.8
SHPRH-211ENST00000629427 TMEM101Q96IK0 257 aa10.05□□□□□ -0.8
SHPRH-211ENST00000629427 A0A1W2PQM1 296 aa10.05□□□□□ -0.8
SHPRH-211ENST00000629427 TIAF1O95411 115 aa10.05□□□□□ -0.8
SHPRH-211ENST00000629427 VSIG10L2P0DP72 767 aa10.05□□□□□ -0.8
SHPRH-211ENST00000629427 HTN3P15516 51 aa10.05□□□□□ -0.8
SHPRH-211ENST00000629427 EMP1P54849 157 aa10.05□□□□□ -0.8
SHPRH-211ENST00000629427 STPG2Q8N412 459 aa10.05□□□□□ -0.8
SHPRH-211ENST00000629427 TMEM252Q8N6L7 170 aa10.05□□□□□ -0.8
SHPRH-211ENST00000629427 JPT1Q9UK76 154 aa10.05□□□□□ -0.8
SHPRH-211ENST00000629427 DOCK11Q5JSL3 2073 aa10.05□□□□□ -0.8
SHPRH-211ENST00000629427 C7orf71A4D174 169 aa10.04□□□□□ -0.8
SHPRH-211ENST00000629427 TRGC1P0CF51 173 aa10.04□□□□□ -0.8
SHPRH-211ENST00000629427 ZNF345Q14585 488 aa10.04□□□□□ -0.8
SHPRH-211ENST00000629427 SIGIRRQ6IA17 410 aa10.04□□□□□ -0.8
SHPRH-211ENST00000629427 GPR146Q96CH1 333 aa10.04□□□□□ -0.8
SHPRH-211ENST00000629427 KIR2DL4Q99706 377 aa10.04□□□□□ -0.8
SHPRH-211ENST00000629427 IL4P05112 153 aa10.04□□□□□ -0.8
SHPRH-211ENST00000629427 C8orf82Q6P1X6 216 aaPredicted RBP10.04□□□□□ -0.8
SHPRH-211ENST00000629427 MARVELD3Q96A59 401 aa10.04□□□□□ -0.8
SHPRH-211ENST00000629427 SCARF2Q96GP6 870 aaPredicted RBP10.04□□□□□ -0.8
SHPRH-211ENST00000629427 AMELYQ99218 206 aa10.04□□□□□ -0.8
SHPRH-211ENST00000629427 MRPS18AQ9NVS2 196 aaKnown RBP10.04□□□□□ -0.8
SHPRH-211ENST00000629427 FOXD3Q9UJU5 478 aaPredicted RBP10.04□□□□□ -0.8
SHPRH-211ENST00000629427 LIMS1P48059 325 aa10.04□□□□□ -0.8
SHPRH-211ENST00000629427 SPATA45Q537H7 98 aa10.04□□□□□ -0.8
SHPRH-211ENST00000629427 SIGLEC12Q96PQ1 595 aa10.04□□□□□ -0.8
SHPRH-211ENST00000629427 S4R3C0 116 aa10.04□□□□□ -0.8
SHPRH-211ENST00000629427 ZNF729A6NN14 1252 aaPredicted RBP10.04□□□□□ -0.8
SHPRH-211ENST00000629427 FAM209AQ5JX71 171 aa10.04□□□□□ -0.8
SHPRH-211ENST00000629427 GOLT1AQ6ZVE7 132 aa10.04□□□□□ -0.8
SHPRH-211ENST00000629427 MRPS16Q9Y3D3 137 aaKnown RBP10.04□□□□□ -0.8
SHPRH-211ENST00000629427 PLA2G10O15496 165 aa10.04□□□□□ -0.8
SHPRH-211ENST00000629427 CEACAM4O75871 244 aa10.04□□□□□ -0.8
SHPRH-211ENST00000629427 C8orf88P0DMB2 117 aa10.04□□□□□ -0.8
SHPRH-211ENST00000629427 CACNG7P62955 275 aa10.04□□□□□ -0.8
SHPRH-211ENST00000629427 FAM27E3Q08E93 113 aa10.04□□□□□ -0.8
SHPRH-211ENST00000629427 ERGP11308 486 aa10.03□□□□□ -0.8
SHPRH-211ENST00000629427 PKIAP61925 76 aa10.03□□□□□ -0.8
SHPRH-211ENST00000629427 CD69Q07108 199 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms