RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 SLC25A33Q9BSK2 321 aa3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 PRORYQ9H606 182 aa3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 OR1A2Q9Y585 309 aa3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 TRAV18A0A075B6X5 111 aa3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 LOC107984640A0A0U1RRK4 108 aa3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 DDTLA6NHG4 134 aaPredicted RBP3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 TAPBPO15533 448 aa3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 DHHO43323 396 aa3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 DPM2O94777 84 aa3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 SFT2D2O95562 160 aa3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 MRPL3P09001 348 aaKnown RBP3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 COL10A1Q03692 680 aa3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 MPV17L2Q567V2 206 aa3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 OOSP2Q86WS3 158 aa3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 BPIFA4PQ86YQ2 179 aa3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 MUCL1Q96DR8 90 aa3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 APOOQ9BUR5 198 aa3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 ZNF665Q9H7R5 613 aa3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 NPVFQ9HCQ7 196 aa3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 RNF186Q9NXI6 227 aa3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 A0A087WWL8 130 aa3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 TRBV6-7A0A0A0MS04 114 aa3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 FAM231BA6NCW3 169 aa3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 H3BTX0 84 aa3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 FFAR1O14842 300 aa3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 MGAMO43451 1857 aa3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 HYPMO75409 117 aa3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 AGFG2O95081 481 aa3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 NDUFB4O95168 129 aa3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 GNB3P16520 340 aa3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 ZNF17P17021 662 aa3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 FOXG1P55316 489 aaPredicted RBP3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 LIM2P55344 173 aa3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 RPL15P61313 204 aaKnown RBP3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 SEC11AP67812 179 aa3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 PSG7Q13046 419 aa3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 LINC01620Q4KN68 170 aa3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 TMEM64Q6YI46 380 aa3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 TMEFF1Q8IYR6 380 aa3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 KIR3DL3Q8N743 410 aa3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 ZNF784Q8NCA9 323 aaPredicted RBP3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 OR4X1Q8NH49 305 aa3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 TMEM147Q9BVK8 224 aa3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 VN1R3Q9BXE9 311 aa3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 SCN8AQ9UQD0 1980 aa3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 SHROOM3Q8TF72 1996 aa3.31□□□□□ -1.88
R3HDM1-220ENST00000628915 TRAV5A0A0B4J249 113 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 A0A0B4J2E0 115 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 A0A1B0GX12 115 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 GRIFINA4D1Z8 144 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 PRSS29PA6NIE9 313 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 STK17BO94768 372 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 NUDT14O95848 222 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 AMY2AP04746 511 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 IGLC2P0DOY2 106 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 IGLC3P0DOY3 106 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 CDAP32320 146 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 DRD3P35462 400 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 GLYATL3Q5SZD4 288 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 FAM27D1Q5T7N8 215 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 NPIPB3Q92617 1050 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 TMEM101Q96IK0 257 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 C18orf15Q96N68 181 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 PMCHL2Q9BQD1 86 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 MRPL20Q9BYC9 149 aaKnown RBP3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 NMES1Q9C002 83 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 THAP10Q9P2Z0 257 aaPredicted RBP3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 RAXQ9Y2V3 346 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 CSAG2Q9Y5P2 127 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 TRAPPC1Q9Y5R8 145 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 V9GY05 133 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 FAM157AC9JC47 383 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 J3QLW9 94 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 VCYO14598 125 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 LYZL6O75951 148 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 JTBO76095 146 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 TIMP1P01033 207 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 GPR183P32249 361 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 PRSS3P35030 304 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 NDUFV3P56181 108 aaKnown RBP3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 TAS2R45P59539 299 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 HSPE1P61604 102 aaKnown RBP3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 ATP5G2Q06055 141 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 KIAA1644Q3SXP7 199 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 DMKNQ6E0U4 476 aaPredicted RBP3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 DNM1P46Q6ZS02 220 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 APRG1Q8IVJ8 170 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 C1orf174Q8IYL3 243 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 TDHQ8IZJ6 230 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 CLDN19Q8N6F1 224 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 OR10J6PQ8NGY7 276 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 GNPNAT1Q96EK6 184 aaPredicted RBP3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 RASL10BQ96S79 203 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 WDR61Q9GZS3 305 aaKnown RBP3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 ISG20L2Q9H9L3 353 aaKnown RBP3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 ANKRD36A6QL64 1941 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 MUC21A0A0G2JKD1 596 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 MUC21A0A140T8X8 626 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 FAM240AA0A1B0GVK7 77 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms