RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 LINC00205P59089 165 aa11.82□□□□□ -0.52
UBXN1-218ENST00000616865 RPS16P62249 146 aaKnown RBP11.82□□□□□ -0.52
UBXN1-218ENST00000616865 OXLD1Q5BKU9 147 aa11.82□□□□□ -0.52
UBXN1-218ENST00000616865 THNSL2Q86YJ6 484 aa11.82□□□□□ -0.52
UBXN1-218ENST00000616865 SPAG16Q8N0X2 631 aa11.82□□□□□ -0.52
UBXN1-218ENST00000616865 OR4S2Q8NH73 311 aa11.82□□□□□ -0.52
UBXN1-218ENST00000616865 CD300LFQ8TDQ1 290 aa11.82□□□□□ -0.52
UBXN1-218ENST00000616865 FLYWCH2Q96CP2 140 aaKnown RBP11.82□□□□□ -0.52
UBXN1-218ENST00000616865 RTBDNQ9BSG5 229 aaPredicted RBP11.82□□□□□ -0.52
UBXN1-218ENST00000616865 C5orf66Q9H5L9 145 aa11.82□□□□□ -0.52
UBXN1-218ENST00000616865 KCNIP3Q9Y2W7 256 aa11.82□□□□□ -0.52
UBXN1-218ENST00000616865 TRAV6A0A075B6T7 132 aa11.81□□□□□ -0.52
UBXN1-218ENST00000616865 SHOXO15266 292 aa11.81□□□□□ -0.52
UBXN1-218ENST00000616865 FBXO24O75426 580 aa11.81□□□□□ -0.52
UBXN1-218ENST00000616865 CRYZL1O95825 349 aa11.81□□□□□ -0.52
UBXN1-218ENST00000616865 SERPINE2P07093 398 aa11.81□□□□□ -0.52
UBXN1-218ENST00000616865 F2RP25116 425 aa11.81□□□□□ -0.52
UBXN1-218ENST00000616865 EIF4EBP1Q13541 118 aaPredicted RBP11.81□□□□□ -0.52
UBXN1-218ENST00000616865 HABP2Q14520 560 aaPredicted RBP11.81□□□□□ -0.52
UBXN1-218ENST00000616865 NSUN5P1Q3KNT7 163 aa11.81□□□□□ -0.52
UBXN1-218ENST00000616865 TCTEX1D1Q8N7M0 179 aa11.81□□□□□ -0.52
UBXN1-218ENST00000616865 ADAD2Q8NCV1 583 aaKnown RBP11.81□□□□□ -0.52
UBXN1-218ENST00000616865 C20orf85Q9H1P6 137 aa11.81□□□□□ -0.52
UBXN1-218ENST00000616865 NAA60Q9H7X0 242 aa11.81□□□□□ -0.52
UBXN1-218ENST00000616865 NUDT15Q9NV35 164 aa11.81□□□□□ -0.52
UBXN1-218ENST00000616865 AURKAIP1Q9NWT8 199 aaPredicted RBP11.81□□□□□ -0.52
UBXN1-218ENST00000616865 TCF19Q9Y242 345 aa11.81□□□□□ -0.52
UBXN1-218ENST00000616865 NUBP2Q9Y5Y2 271 aa11.81□□□□□ -0.52
UBXN1-218ENST00000616865 C3orf85A0A1B0GTC6 90 aa11.8□□□□□ -0.52
UBXN1-218ENST00000616865 FAM90A9PA6NNJ1 464 aa11.8□□□□□ -0.52
UBXN1-218ENST00000616865 NCBP2LA6PVI3 153 aaKnown RBP11.8□□□□□ -0.52
UBXN1-218ENST00000616865 PEX14O75381 377 aa11.8□□□□□ -0.52
UBXN1-218ENST00000616865 H2AFB2P0C5Z0 115 aa11.8□□□□□ -0.52
UBXN1-218ENST00000616865 ANXA3P12429 323 aa11.8□□□□□ -0.52
UBXN1-218ENST00000616865 VAMP1P23763 118 aa11.8□□□□□ -0.52
UBXN1-218ENST00000616865 PLET1Q6UQ28 207 aa11.8□□□□□ -0.52
UBXN1-218ENST00000616865 NRARPQ7Z6K4 114 aa11.8□□□□□ -0.52
UBXN1-218ENST00000616865 TMEM219Q86XT9 240 aa11.8□□□□□ -0.52
UBXN1-218ENST00000616865 PIFOQ8TCI5 191 aa11.8□□□□□ -0.52
UBXN1-218ENST00000616865 DDB2Q92466 427 aa11.8□□□□□ -0.52
UBXN1-218ENST00000616865 EAF1Q96JC9 268 aaPredicted RBP11.8□□□□□ -0.52
UBXN1-218ENST00000616865 HARBI1Q96MB7 349 aa11.8□□□□□ -0.52
UBXN1-218ENST00000616865 TSNAXQ99598 290 aaKnown RBP11.8□□□□□ -0.52
UBXN1-218ENST00000616865 ZNF702PQ9H963 129 aa11.8□□□□□ -0.52
UBXN1-218ENST00000616865 SERTAD4Q9NUC0 356 aa11.8□□□□□ -0.52
UBXN1-218ENST00000616865 KIAA1456Q9P272 454 aa11.8□□□□□ -0.52
UBXN1-218ENST00000616865 FLVCR2Q9UPI3 526 aa11.8□□□□□ -0.52
UBXN1-218ENST00000616865 RYR3Q15413 4870 aa11.79□□□□□ -0.52
UBXN1-218ENST00000616865 A6NDX4 124 aa11.79□□□□□ -0.52
UBXN1-218ENST00000616865 CRYM-AS1A6NIL9 109 aa11.79□□□□□ -0.52
UBXN1-218ENST00000616865 H0Y980 276 aa11.79□□□□□ -0.52
UBXN1-218ENST00000616865 B3GALNT1O75752 331 aa11.79□□□□□ -0.52
UBXN1-218ENST00000616865 PTTG1O95997 202 aa11.79□□□□□ -0.52
UBXN1-218ENST00000616865 CD28P10747 220 aa11.79□□□□□ -0.52
UBXN1-218ENST00000616865 LPAR6P43657 344 aa11.79□□□□□ -0.52
UBXN1-218ENST00000616865 UBE2MP61081 183 aaKnown RBP11.79□□□□□ -0.52
UBXN1-218ENST00000616865 ERVK-16P61578 105 aa11.79□□□□□ -0.52
UBXN1-218ENST00000616865 PLGLAQ15195 96 aa11.79□□□□□ -0.52
UBXN1-218ENST00000616865 MMDQ15546 238 aa11.79□□□□□ -0.52
UBXN1-218ENST00000616865 RGS21Q2M5E4 152 aa11.79□□□□□ -0.52
UBXN1-218ENST00000616865 TRIM16LQ309B1 348 aa11.79□□□□□ -0.52
UBXN1-218ENST00000616865 C4orf46Q504U0 113 aa11.79□□□□□ -0.52
UBXN1-218ENST00000616865 TMEM128Q5BJH2 165 aa11.79□□□□□ -0.52
UBXN1-218ENST00000616865 SLC25A42Q86VD7 318 aa11.79□□□□□ -0.52
UBXN1-218ENST00000616865 NDUFA11Q86Y39 141 aa11.79□□□□□ -0.52
UBXN1-218ENST00000616865 Q8N2B8 174 aa11.79□□□□□ -0.52
UBXN1-218ENST00000616865 OR4F17Q8NGA8 305 aa11.79□□□□□ -0.52
UBXN1-218ENST00000616865 OR4F4Q96R69 305 aa11.79□□□□□ -0.52
UBXN1-218ENST00000616865 AIFM2Q9BRQ8 373 aa11.79□□□□□ -0.52
UBXN1-218ENST00000616865 SLC25A33Q9BSK2 321 aa11.79□□□□□ -0.52
UBXN1-218ENST00000616865 ADARB2-AS1A8MUL3 147 aa11.78□□□□□ -0.52
UBXN1-218ENST00000616865 RBFOX2O43251 390 aaKnown RBP eCLIP11.78□□□□□ -0.52
UBXN1-218ENST00000616865 OR2F2O95006 317 aa11.78□□□□□ -0.52
UBXN1-218ENST00000616865 HRASP01112 189 aa11.78□□□□□ -0.52
UBXN1-218ENST00000616865 IGKV1-16P04430 117 aa11.78□□□□□ -0.52
UBXN1-218ENST00000616865 ANXA7P20073 488 aaKnown RBP11.78□□□□□ -0.52
UBXN1-218ENST00000616865 LGALS7P47929 136 aa11.78□□□□□ -0.52
UBXN1-218ENST00000616865 RAB25P57735 213 aa11.78□□□□□ -0.52
UBXN1-218ENST00000616865 DHODHQ02127 395 aa11.78□□□□□ -0.52
UBXN1-218ENST00000616865 EBI3Q14213 229 aa11.78□□□□□ -0.52
UBXN1-218ENST00000616865 SP6Q3SY56 376 aa11.78□□□□□ -0.52
UBXN1-218ENST00000616865 TMEM177Q53S58 311 aa11.78□□□□□ -0.52
UBXN1-218ENST00000616865 C16orf82Q7Z2V1 217 aa11.78□□□□□ -0.52
UBXN1-218ENST00000616865 DUSP18Q8NEJ0 188 aa11.78□□□□□ -0.52
UBXN1-218ENST00000616865 OR8H1Q8NGG4 311 aa11.78□□□□□ -0.52
UBXN1-218ENST00000616865 OSR1Q8TAX0 266 aaPredicted RBP11.78□□□□□ -0.52
UBXN1-218ENST00000616865 WIPF2Q8TF74 440 aaPredicted RBP11.78□□□□□ -0.52
UBXN1-218ENST00000616865 R3HDM4Q96D70 268 aa11.78□□□□□ -0.52
UBXN1-218ENST00000616865 RBM14Q96PK6 669 aaKnown RBP11.78□□□□□ -0.52
UBXN1-218ENST00000616865 RNF5Q99942 180 aa11.78□□□□□ -0.52
UBXN1-218ENST00000616865 MOB4Q9Y3A3 225 aa11.78□□□□□ -0.52
UBXN1-218ENST00000616865 NBR2O15453 112 aa11.77□□□□□ -0.53
UBXN1-218ENST00000616865 RAMP3O60896 148 aa11.77□□□□□ -0.53
UBXN1-218ENST00000616865 ATG12O94817 140 aa11.77□□□□□ -0.53
UBXN1-218ENST00000616865 HPRT1P00492 218 aa11.77□□□□□ -0.53
UBXN1-218ENST00000616865 OR5AC1P0C628 307 aa11.77□□□□□ -0.53
UBXN1-218ENST00000616865 VMA21Q3ZAQ7 101 aa11.77□□□□□ -0.53
UBXN1-218ENST00000616865 DMBX1Q8NFW5 382 aa11.77□□□□□ -0.53
UBXN1-218ENST00000616865 RNASE11Q8TAA1 199 aaKnown RBP11.77□□□□□ -0.53
UBXN1-218ENST00000616865 CASTOR1Q8WTX7 329 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms