RNA–Protein interactions for RNA: ENST00000616701.4

SEMA3B-212, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-212ENST00000616701 SH3BGRL3Q9H299 93 aa12.97□□□□□ -0.33
SEMA3B-212ENST00000616701 CACNG5Q9UF02 275 aa12.97□□□□□ -0.33
SEMA3B-212ENST00000616701 COL6A6A6NMZ7 2263 aa12.97□□□□□ -0.33
SEMA3B-212ENST00000616701 IFNL4K9M1U5 179 aa12.96□□□□□ -0.33
SEMA3B-212ENST00000616701 IGKV1-5P01602 117 aa12.96□□□□□ -0.33
SEMA3B-212ENST00000616701 SAT2Q96F10 170 aaPredicted RBP12.96□□□□□ -0.33
SEMA3B-212ENST00000616701 PSG11Q9UQ72 335 aa12.96□□□□□ -0.33
SEMA3B-212ENST00000616701 TMPRSS3P57727 454 aa12.96□□□□□ -0.33
SEMA3B-212ENST00000616701 UTF1Q5T230 341 aa12.96□□□□□ -0.33
SEMA3B-212ENST00000616701 FGFRL1Q8N441 504 aa12.96□□□□□ -0.33
SEMA3B-212ENST00000616701 GCM1Q9NP62 436 aa12.96□□□□□ -0.33
SEMA3B-212ENST00000616701 JTBO76095 146 aa12.96□□□□□ -0.34
SEMA3B-212ENST00000616701 RBMXL1Q96E39 390 aaKnown RBP12.96□□□□□ -0.34
SEMA3B-212ENST00000616701 ZNF835Q9Y2P0 537 aa12.96□□□□□ -0.34
SEMA3B-212ENST00000616701 PPIAL4AQ9Y536 164 aa12.96□□□□□ -0.34
SEMA3B-212ENST00000616701 C22orf46C9J442 243 aa12.95□□□□□ -0.34
SEMA3B-212ENST00000616701 C1QL1O75973 258 aa12.95□□□□□ -0.34
SEMA3B-212ENST00000616701 IAPPP10997 89 aa12.95□□□□□ -0.34
SEMA3B-212ENST00000616701 CD81P60033 236 aa12.95□□□□□ -0.34
SEMA3B-212ENST00000616701 RPS23P62266 143 aaKnown RBP12.95□□□□□ -0.34
SEMA3B-212ENST00000616701 HEPN1Q6WQI6 88 aa12.95□□□□□ -0.34
SEMA3B-212ENST00000616701 MALSU1Q96EH3 234 aa12.95□□□□□ -0.34
SEMA3B-212ENST00000616701 C11orf1Q9H5F2 150 aa12.95□□□□□ -0.34
SEMA3B-212ENST00000616701 PLEKHF2Q9H8W4 249 aa12.95□□□□□ -0.34
SEMA3B-212ENST00000616701 FHITP49789 147 aa12.95□□□□□ -0.34
SEMA3B-212ENST00000616701 FGF8P55075 233 aaPredicted RBP12.95□□□□□ -0.34
SEMA3B-212ENST00000616701 JOSD1Q15040 202 aaPredicted RBP12.95□□□□□ -0.34
SEMA3B-212ENST00000616701 TMEM95Q3KNT9 176 aa12.95□□□□□ -0.34
SEMA3B-212ENST00000616701 TEX38Q6PEX7 206 aa12.95□□□□□ -0.34
SEMA3B-212ENST00000616701 NEUROG1Q92886 237 aa12.95□□□□□ -0.34
SEMA3B-212ENST00000616701 LEAP2Q969E1 77 aa12.95□□□□□ -0.34
SEMA3B-212ENST00000616701 SNX22Q96L94 193 aa12.95□□□□□ -0.34
SEMA3B-212ENST00000616701 WFIKKN1Q96NZ8 548 aa12.95□□□□□ -0.34
SEMA3B-212ENST00000616701 ODAMA1E959 279 aa12.94□□□□□ -0.34
SEMA3B-212ENST00000616701 CCL25O15444 150 aa12.94□□□□□ -0.34
SEMA3B-212ENST00000616701 DVL1P1P54792 670 aaPredicted RBP12.94□□□□□ -0.34
SEMA3B-212ENST00000616701 ID3Q02535 119 aa12.94□□□□□ -0.34
SEMA3B-212ENST00000616701 ODF3L1Q8IXM7 274 aa12.94□□□□□ -0.34
SEMA3B-212ENST00000616701 ZNF645Q8N7E2 425 aa12.94□□□□□ -0.34
SEMA3B-212ENST00000616701 FAM234AQ9H0X4 552 aa12.94□□□□□ -0.34
SEMA3B-212ENST00000616701 GSX1Q9H4S2 264 aaPredicted RBP12.94□□□□□ -0.34
SEMA3B-212ENST00000616701 PUS1Q9Y606 427 aaKnown RBP eCLIP12.94□□□□□ -0.34
SEMA3B-212ENST00000616701 KPTNQ9Y664 436 aa12.94□□□□□ -0.34
SEMA3B-212ENST00000616701 A0A1B0GV50 99 aa12.94□□□□□ -0.34
SEMA3B-212ENST00000616701 KRASP01116 189 aa12.94□□□□□ -0.34
SEMA3B-212ENST00000616701 GYPAP02724 150 aa12.94□□□□□ -0.34
SEMA3B-212ENST00000616701 EIF5AP63241 154 aaKnown RBP12.94□□□□□ -0.34
SEMA3B-212ENST00000616701 C3orf36Q3SXR2 165 aa12.94□□□□□ -0.34
SEMA3B-212ENST00000616701 GPR157Q5UAW9 335 aa12.94□□□□□ -0.34
SEMA3B-212ENST00000616701 BTNL8Q6UX41 500 aa12.94□□□□□ -0.34
SEMA3B-212ENST00000616701 TMEM252Q8N6L7 170 aa12.94□□□□□ -0.34
SEMA3B-212ENST00000616701 RND1Q92730 232 aa12.94□□□□□ -0.34
SEMA3B-212ENST00000616701 LIN7CQ9NUP9 197 aaKnown RBP12.94□□□□□ -0.34
SEMA3B-212ENST00000616701 GNG12Q9UBI6 72 aa12.94□□□□□ -0.34
SEMA3B-212ENST00000616701 DYSFO75923 2080 aa12.94□□□□□ -0.34
SEMA3B-212ENST00000616701 C17orf98A8MV24 154 aa12.93□□□□□ -0.34
SEMA3B-212ENST00000616701 C15orf65H3BRN8 121 aa12.93□□□□□ -0.34
SEMA3B-212ENST00000616701 CYB5BO43169 146 aa12.93□□□□□ -0.34
SEMA3B-212ENST00000616701 G6PCP35575 357 aa12.93□□□□□ -0.34
SEMA3B-212ENST00000616701 TMEM267Q0VDI3 215 aaPredicted RBP12.93□□□□□ -0.34
SEMA3B-212ENST00000616701 TNFRSF14Q92956 283 aa12.93□□□□□ -0.34
SEMA3B-212ENST00000616701 CCL13Q99616 98 aa12.93□□□□□ -0.34
SEMA3B-212ENST00000616701 SPINT2O43291 252 aa12.93□□□□□ -0.34
SEMA3B-212ENST00000616701 LHBP01229 141 aa12.93□□□□□ -0.34
SEMA3B-212ENST00000616701 GAPDHP04406 335 aaKnown RBP12.93□□□□□ -0.34
SEMA3B-212ENST00000616701 TRGC1P0CF51 173 aa12.93□□□□□ -0.34
SEMA3B-212ENST00000616701 DYNLT3P51808 116 aa12.93□□□□□ -0.34
SEMA3B-212ENST00000616701 ADIPOQQ15848 244 aa12.93□□□□□ -0.34
SEMA3B-212ENST00000616701 Q6ZRG5 221 aa12.93□□□□□ -0.34
SEMA3B-212ENST00000616701 LHFPL4Q7Z7J7 247 aa12.93□□□□□ -0.34
SEMA3B-212ENST00000616701 FAM90A1Q86YD7 464 aa12.93□□□□□ -0.34
SEMA3B-212ENST00000616701 OR5C1Q8NGR4 320 aa12.93□□□□□ -0.34
SEMA3B-212ENST00000616701 IL22RA2Q969J5 263 aa12.93□□□□□ -0.34
SEMA3B-212ENST00000616701 RNF2Q99496 336 aa12.93□□□□□ -0.34
SEMA3B-212ENST00000616701 ELOVL5Q9NYP7 299 aa12.93□□□□□ -0.34
SEMA3B-212ENST00000616701 RNF7Q9UBF6 113 aa12.93□□□□□ -0.34
SEMA3B-212ENST00000616701 DOCK11Q5JSL3 2073 aa12.93□□□□□ -0.34
SEMA3B-212ENST00000616701 DUXBA0A1W2PPF3 345 aa12.93□□□□□ -0.34
SEMA3B-212ENST00000616701 MDKP21741 143 aaPredicted RBP12.93□□□□□ -0.34
SEMA3B-212ENST00000616701 PAX9P55771 341 aa12.93□□□□□ -0.34
SEMA3B-212ENST00000616701 ZNF616Q08AN1 781 aa12.93□□□□□ -0.34
SEMA3B-212ENST00000616701 FAM216BQ8N7L0 139 aa12.93□□□□□ -0.34
SEMA3B-212ENST00000616701 LYRM2Q9NU23 88 aaPredicted RBP12.93□□□□□ -0.34
SEMA3B-212ENST00000616701 BORCS7-ASMTA0A0B4J1R7 106 aa12.92□□□□□ -0.34
SEMA3B-212ENST00000616701 CLEC18AA5D8T8 446 aa12.92□□□□□ -0.34
SEMA3B-212ENST00000616701 CXCL1P09341 107 aa12.92□□□□□ -0.34
SEMA3B-212ENST00000616701 CEBPGP53567 150 aa12.92□□□□□ -0.34
SEMA3B-212ENST00000616701 RBPJQ06330 500 aa12.92□□□□□ -0.34
SEMA3B-212ENST00000616701 C1QL4Q86Z23 238 aa12.92□□□□□ -0.34
SEMA3B-212ENST00000616701 CLEC18CQ8NCF0 446 aa12.92□□□□□ -0.34
SEMA3B-212ENST00000616701 ALKBH7Q9BT30 221 aaPredicted RBP12.92□□□□□ -0.34
SEMA3B-212ENST00000616701 SLC25A31Q9H0C2 315 aa12.92□□□□□ -0.34
SEMA3B-212ENST00000616701 CLEC5AQ9NY25 188 aa12.92□□□□□ -0.34
SEMA3B-212ENST00000616701 RAI1Q7Z5J4 1906 aaPredicted RBP12.92□□□□□ -0.34
SEMA3B-212ENST00000616701 FAM90A27PA6NNH2 459 aa12.92□□□□□ -0.34
SEMA3B-212ENST00000616701 LINC00473A8K010 186 aa12.92□□□□□ -0.34
SEMA3B-212ENST00000616701 NDUFS8O00217 210 aa12.92□□□□□ -0.34
SEMA3B-212ENST00000616701 MGST3O14880 152 aa12.92□□□□□ -0.34
SEMA3B-212ENST00000616701 S1PR2O95136 353 aa12.92□□□□□ -0.34
SEMA3B-212ENST00000616701 SULT1A2P50226 295 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms