RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 BAGE2Q86Y30 109 aa4.75□□□□□ -1.65
SYNCRIP-204ENST00000616122 ABHD12Q8N2K0 398 aa4.75□□□□□ -1.65
SYNCRIP-204ENST00000616122 Q8NFD4 153 aa4.75□□□□□ -1.65
SYNCRIP-204ENST00000616122 CA5BP1Q8WTZ4 195 aa4.75□□□□□ -1.65
SYNCRIP-204ENST00000616122 TMEM18Q96B42 140 aa4.75□□□□□ -1.65
SYNCRIP-204ENST00000616122 CCL13Q99616 98 aa4.75□□□□□ -1.65
SYNCRIP-204ENST00000616122 WDR61Q9GZS3 305 aaKnown RBP4.75□□□□□ -1.65
SYNCRIP-204ENST00000616122 CALYQ9NYX4 217 aa4.75□□□□□ -1.65
SYNCRIP-204ENST00000616122 AKAP13Q12802 2813 aa4.75□□□□□ -1.65
SYNCRIP-204ENST00000616122 FAM201AQ5SY85 155 aa4.75□□□□□ -1.65
SYNCRIP-204ENST00000616122 C1orf174Q8IYL3 243 aa4.75□□□□□ -1.65
SYNCRIP-204ENST00000616122 RND1Q92730 232 aa4.75□□□□□ -1.65
SYNCRIP-204ENST00000616122 SPAG8Q99932 426 aaPredicted RBP4.75□□□□□ -1.65
SYNCRIP-204ENST00000616122 NPVFQ9HCQ7 196 aa4.75□□□□□ -1.65
SYNCRIP-204ENST00000616122 COA4Q9NYJ1 87 aa4.75□□□□□ -1.65
SYNCRIP-204ENST00000616122 CXorf65A6NEN9 183 aa4.75□□□□□ -1.65
SYNCRIP-204ENST00000616122 FOXI3A8MTJ6 420 aaPredicted RBP4.75□□□□□ -1.65
SYNCRIP-204ENST00000616122 J3QR06 171 aa4.75□□□□□ -1.65
SYNCRIP-204ENST00000616122 MPDU1O75352 247 aa4.75□□□□□ -1.65
SYNCRIP-204ENST00000616122 FABP1P07148 127 aa4.75□□□□□ -1.65
SYNCRIP-204ENST00000616122 HSPE1P61604 102 aaKnown RBP4.75□□□□□ -1.65
SYNCRIP-204ENST00000616122 COL10A1Q03692 680 aa4.75□□□□□ -1.65
SYNCRIP-204ENST00000616122 SLC35E4Q6ICL7 350 aa4.75□□□□□ -1.65
SYNCRIP-204ENST00000616122 GFRALQ6UXV0 394 aa4.75□□□□□ -1.65
SYNCRIP-204ENST00000616122 SAP30LQ9HAJ7 183 aa4.75□□□□□ -1.65
SYNCRIP-204ENST00000616122 STAB1Q9NY15 2570 aa4.75□□□□□ -1.65
SYNCRIP-204ENST00000616122 KBTBD11O94819 623 aa4.74□□□□□ -1.65
SYNCRIP-204ENST00000616122 LYL1P12980 280 aa4.74□□□□□ -1.65
SYNCRIP-204ENST00000616122 C18orf12Q96KH6 178 aa4.74□□□□□ -1.65
SYNCRIP-204ENST00000616122 MS4A5Q9H3V2 200 aa4.74□□□□□ -1.65
SYNCRIP-204ENST00000616122 CRIM1Q9NZV1 1036 aa4.74□□□□□ -1.65
SYNCRIP-204ENST00000616122 LRRC75BQ2VPJ9 315 aa4.74□□□□□ -1.65
SYNCRIP-204ENST00000616122 GCSAMQ8N6F7 178 aa4.74□□□□□ -1.65
SYNCRIP-204ENST00000616122 KDF1Q8NAX2 398 aaPredicted RBP4.74□□□□□ -1.65
SYNCRIP-204ENST00000616122 MDS2Q8NDY4 140 aa4.74□□□□□ -1.65
SYNCRIP-204ENST00000616122 OR10X1Q8NGY0 326 aa4.74□□□□□ -1.65
SYNCRIP-204ENST00000616122 CTDSP1Q9GZU7 261 aa4.74□□□□□ -1.65
SYNCRIP-204ENST00000616122 HES4Q9HCC6 221 aa4.74□□□□□ -1.65
SYNCRIP-204ENST00000616122 NDUFB3O43676 98 aa4.74□□□□□ -1.65
SYNCRIP-204ENST00000616122 FOXH1O75593 365 aa4.74□□□□□ -1.65
SYNCRIP-204ENST00000616122 NDUFB4O95168 129 aa4.74□□□□□ -1.65
SYNCRIP-204ENST00000616122 SUB1P53999 127 aaKnown RBP eCLIP4.74□□□□□ -1.655e-6■■■■□ 23
SYNCRIP-204ENST00000616122 SUMO1P63165 101 aaKnown RBP4.74□□□□□ -1.65
SYNCRIP-204ENST00000616122 ACSF3Q4G176 576 aaPredicted RBP4.74□□□□□ -1.65
SYNCRIP-204ENST00000616122 BHLHA15Q7RTS1 189 aaPredicted RBP4.74□□□□□ -1.65
SYNCRIP-204ENST00000616122 VSTM2AQ8TAG5 236 aa4.74□□□□□ -1.65
SYNCRIP-204ENST00000616122 HARBI1Q96MB7 349 aa4.74□□□□□ -1.65
SYNCRIP-204ENST00000616122 TANC1Q9C0D5 1861 aa4.74□□□□□ -1.65
SYNCRIP-204ENST00000616122 SRRM5B3KS81 715 aa4.74□□□□□ -1.65
SYNCRIP-204ENST00000616122 FCN1O00602 326 aa4.74□□□□□ -1.65
SYNCRIP-204ENST00000616122 FAM27E3Q08E93 113 aa4.74□□□□□ -1.65
SYNCRIP-204ENST00000616122 MIC13Q5XKP0 118 aa4.74□□□□□ -1.65
SYNCRIP-204ENST00000616122 RBMXL3Q8N7X1 1067 aaKnown RBP4.74□□□□□ -1.65
SYNCRIP-204ENST00000616122 LILRB1Q8NHL6 650 aaPredicted RBP4.74□□□□□ -1.65
SYNCRIP-204ENST00000616122 LEAP2Q969E1 77 aa4.74□□□□□ -1.65
SYNCRIP-204ENST00000616122 SLC45A2Q9UMX9 530 aa4.74□□□□□ -1.65
SYNCRIP-204ENST00000616122 IGHV3OR15-7A0A075B7D8 119 aa4.74□□□□□ -1.65
SYNCRIP-204ENST00000616122 ZNF503-AS2A6NEH8 195 aa4.74□□□□□ -1.65
SYNCRIP-204ENST00000616122 ACAA1P09110 424 aaPredicted RBP4.74□□□□□ -1.65
SYNCRIP-204ENST00000616122 DEFA4P12838 97 aa4.74□□□□□ -1.65
SYNCRIP-204ENST00000616122 SELLP14151 372 aa4.74□□□□□ -1.65
SYNCRIP-204ENST00000616122 TIMM23BQ5SRD1 257 aa4.74□□□□□ -1.65
SYNCRIP-204ENST00000616122 ZNF324BQ6AW86 544 aaPredicted RBP4.74□□□□□ -1.65
SYNCRIP-204ENST00000616122 TGIF2LYQ8IUE0 185 aa4.74□□□□□ -1.65
SYNCRIP-204ENST00000616122 TGIF2LXQ8IUE1 241 aa4.74□□□□□ -1.65
SYNCRIP-204ENST00000616122 OR10G8Q8NGN5 311 aa4.74□□□□□ -1.65
SYNCRIP-204ENST00000616122 P2RX4Q99571 388 aa4.74□□□□□ -1.65
SYNCRIP-204ENST00000616122 TXNDC17Q9BRA2 123 aa4.74□□□□□ -1.65
SYNCRIP-204ENST00000616122 RAB29O14966 203 aa4.73□□□□□ -1.65
SYNCRIP-204ENST00000616122 SNRPCP09234 159 aaKnown RBP4.73□□□□□ -1.65
SYNCRIP-204ENST00000616122 MGST1P10620 155 aaKnown RBP4.73□□□□□ -1.65
SYNCRIP-204ENST00000616122 TEPPQ6URK8 271 aa4.73□□□□□ -1.65
SYNCRIP-204ENST00000616122 SLC24A4Q8NFF2 622 aa4.73□□□□□ -1.65
SYNCRIP-204ENST00000616122 PARLQ9H300 379 aa4.73□□□□□ -1.65
SYNCRIP-204ENST00000616122 TRAV38-1A0A0B4J264 116 aa4.73□□□□□ -1.65
SYNCRIP-204ENST00000616122 IGHV2OR16-5A0A0B4J2B6 119 aa4.73□□□□□ -1.65
SYNCRIP-204ENST00000616122 IQCF6A8MYZ5 107 aa4.73□□□□□ -1.65
SYNCRIP-204ENST00000616122 AQP7O14520 342 aa4.73□□□□□ -1.65
SYNCRIP-204ENST00000616122 CYB5R3P00387 301 aaPredicted RBP4.73□□□□□ -1.65
SYNCRIP-204ENST00000616122 CD55P08174 381 aa4.73□□□□□ -1.65
SYNCRIP-204ENST00000616122 IL3RAP26951 378 aa4.73□□□□□ -1.65
SYNCRIP-204ENST00000616122 WDR82Q6UXN9 313 aa4.73□□□□□ -1.65
SYNCRIP-204ENST00000616122 ACP7Q6ZNF0 438 aa4.73□□□□□ -1.65
SYNCRIP-204ENST00000616122 OR4P4Q8NGL7 312 aa4.73□□□□□ -1.65
SYNCRIP-204ENST00000616122 GAL3ST2Q9H3Q3 398 aa4.73□□□□□ -1.65
SYNCRIP-204ENST00000616122 TMEM140Q9NV12 185 aa4.73□□□□□ -1.65
SYNCRIP-204ENST00000616122 ZMAT5Q9UDW3 170 aaKnown RBP4.73□□□□□ -1.65
SYNCRIP-204ENST00000616122 WDR83OSQ9Y284 106 aa4.73□□□□□ -1.65
SYNCRIP-204ENST00000616122 CDH23Q9H251 3354 aa4.73□□□□□ -1.65
SYNCRIP-204ENST00000616122 SPINK4O60575 86 aa4.73□□□□□ -1.65
SYNCRIP-204ENST00000616122 CLN5O75503 358 aa4.73□□□□□ -1.65
SYNCRIP-204ENST00000616122 TFF1P04155 84 aa4.73□□□□□ -1.65
SYNCRIP-204ENST00000616122 ZNF585BQ52M93 769 aa4.73□□□□□ -1.65
SYNCRIP-204ENST00000616122 WDR25Q64LD2 544 aaPredicted RBP4.73□□□□□ -1.65
SYNCRIP-204ENST00000616122 VKORC1L1Q8N0U8 176 aa4.73□□□□□ -1.65
SYNCRIP-204ENST00000616122 FAM216BQ8N7L0 139 aa4.73□□□□□ -1.65
SYNCRIP-204ENST00000616122 MBNL3Q9NUK0 354 aaKnown RBP4.73□□□□□ -1.65
SYNCRIP-204ENST00000616122 JPT1Q9UK76 154 aa4.73□□□□□ -1.65
SYNCRIP-204ENST00000616122 PRNDQ9UKY0 176 aa4.73□□□□□ -1.65
SYNCRIP-204ENST00000616122 REG1BP48304 166 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms