RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 TCL1AP56279 114 aa11.06□□□□□ -0.64
TCF3-220ENST00000611869 PEAR1Q5VY43 1037 aaPredicted RBP11.06□□□□□ -0.64
TCF3-220ENST00000611869 SPNS3Q6ZMD2 512 aa11.06□□□□□ -0.64
TCF3-220ENST00000611869 OR4X1Q8NH49 305 aa11.06□□□□□ -0.64
TCF3-220ENST00000611869 GTF3AQ92664 365 aaKnown RBP11.06□□□□□ -0.64
TCF3-220ENST00000611869 TMEM167BQ9NRX6 74 aa11.06□□□□□ -0.64
TCF3-220ENST00000611869 PLCE1Q9P212 2302 aa11.05□□□□□ -0.64
TCF3-220ENST00000611869 B4DEV8 164 aa11.05□□□□□ -0.64
TCF3-220ENST00000611869 H0Y8G0 127 aa11.05□□□□□ -0.64
TCF3-220ENST00000611869 TMPRSS3P57727 454 aa11.05□□□□□ -0.64
TCF3-220ENST00000611869 BSPH1Q075Z2 132 aa11.05□□□□□ -0.64
TCF3-220ENST00000611869 ZNF324BQ6AW86 544 aaPredicted RBP11.05□□□□□ -0.64
TCF3-220ENST00000611869 RAMP3O60896 148 aa11.05□□□□□ -0.64
TCF3-220ENST00000611869 HCP5Q6MZN7 132 aa11.05□□□□□ -0.64
TCF3-220ENST00000611869 RCC1LQ96I51 464 aaKnown RBP11.05□□□□□ -0.64
TCF3-220ENST00000611869 WDR61Q9GZS3 305 aaKnown RBP11.05□□□□□ -0.64
TCF3-220ENST00000611869 LPAR2Q9HBW0 351 aa11.05□□□□□ -0.64
TCF3-220ENST00000611869 PPP1R14DQ9NXH3 145 aa11.05□□□□□ -0.64
TCF3-220ENST00000611869 SLC25A17O43808 307 aa11.05□□□□□ -0.64
TCF3-220ENST00000611869 CXorf1O96002 111 aa11.05□□□□□ -0.64
TCF3-220ENST00000611869 IGHV3-48P01763 117 aa11.05□□□□□ -0.64
TCF3-220ENST00000611869 OR10G8Q8NGN5 311 aa11.05□□□□□ -0.64
TCF3-220ENST00000611869 NAT8BQ9UHF3 227 aa11.05□□□□□ -0.64
TCF3-220ENST00000611869 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.05□□□□□ -0.644e-7■■■□□ 16.2
TCF3-220ENST00000611869 XKRY2A2RUG3 117 aa11.04□□□□□ -0.64
TCF3-220ENST00000611869 WIPF3A6NGB9 483 aa11.04□□□□□ -0.64
TCF3-220ENST00000611869 NDUFB4O95168 129 aa11.04□□□□□ -0.64
TCF3-220ENST00000611869 RPL8P62917 257 aaKnown RBP11.04□□□□□ -0.64
TCF3-220ENST00000611869 OR1L4Q8NGR5 311 aa11.04□□□□□ -0.64
TCF3-220ENST00000611869 MRPL37Q9BZE1 423 aaKnown RBP11.04□□□□□ -0.64
TCF3-220ENST00000611869 TMPRSS5Q9H3S3 457 aa11.04□□□□□ -0.64
TCF3-220ENST00000611869 DBX1A6NMT0 343 aa11.04□□□□□ -0.64
TCF3-220ENST00000611869 ZNF729A6NN14 1252 aaPredicted RBP11.04□□□□□ -0.64
TCF3-220ENST00000611869 STARD4Q96DR4 205 aa11.04□□□□□ -0.64
TCF3-220ENST00000611869 WFDC1Q9HC57 220 aa11.04□□□□□ -0.64
TCF3-220ENST00000611869 SIRT7Q9NRC8 400 aa11.04□□□□□ -0.64
TCF3-220ENST00000611869 CYTL1Q9NRR1 136 aa11.04□□□□□ -0.64
TCF3-220ENST00000611869 HILPDAQ9Y5L2 63 aa11.04□□□□□ -0.64
TCF3-220ENST00000611869 HSBP1L1C9JCN9 74 aa11.04□□□□□ -0.64
TCF3-220ENST00000611869 CDK2AP1O14519 115 aa11.04□□□□□ -0.64
TCF3-220ENST00000611869 MEOX2P50222 304 aa11.04□□□□□ -0.64
TCF3-220ENST00000611869 SUMO1P63165 101 aaKnown RBP11.04□□□□□ -0.64
TCF3-220ENST00000611869 ID3Q02535 119 aa11.04□□□□□ -0.64
TCF3-220ENST00000611869 OR2T6Q8NHC8 308 aa11.04□□□□□ -0.64
TCF3-220ENST00000611869 CHEK1O14757 476 aa11.04□□□□□ -0.64
TCF3-220ENST00000611869 SELLP14151 372 aa11.04□□□□□ -0.64
TCF3-220ENST00000611869 SSX8Q7RTT4 187 aa11.04□□□□□ -0.64
TCF3-220ENST00000611869 EIF4E3Q8N5X7 224 aaKnown RBP11.04□□□□□ -0.64
TCF3-220ENST00000611869 LRTM2Q8N967 370 aa11.04□□□□□ -0.64
TCF3-220ENST00000611869 PARD6AQ9NPB6 346 aa11.04□□□□□ -0.64
TCF3-220ENST00000611869 RNF115Q9Y4L5 304 aa11.04□□□□□ -0.64
TCF3-220ENST00000611869 DOCK11Q5JSL3 2073 aa11.04□□□□□ -0.64
TCF3-220ENST00000611869 OR4D5Q8NGN0 318 aa11.03□□□□□ -0.64
TCF3-220ENST00000611869 CLCF1Q9UBD9 225 aa11.03□□□□□ -0.64
TCF3-220ENST00000611869 PRR14LQ5THK1 2151 aa11.03□□□□□ -0.64
TCF3-220ENST00000611869 ZNF503-AS2A6NEH8 195 aa11.03□□□□□ -0.64
TCF3-220ENST00000611869 FCN1O00602 326 aa11.03□□□□□ -0.64
TCF3-220ENST00000611869 MPDU1O75352 247 aa11.03□□□□□ -0.64
TCF3-220ENST00000611869 PLAUP00749 431 aa11.03□□□□□ -0.64
TCF3-220ENST00000611869 EGR1P18146 543 aa11.03□□□□□ -0.64
TCF3-220ENST00000611869 ARL3P36405 182 aa11.03□□□□□ -0.64
TCF3-220ENST00000611869 OTOGLQ3ZCN5 2332 aa11.03□□□□□ -0.64
TCF3-220ENST00000611869 FGF16O43320 207 aa11.03□□□□□ -0.64
TCF3-220ENST00000611869 PDE6DO43924 150 aa11.03□□□□□ -0.64
TCF3-220ENST00000611869 ZNF705AQ6ZN79 300 aaPredicted RBP11.03□□□□□ -0.64
TCF3-220ENST00000611869 C16orf82Q7Z2V1 217 aa11.03□□□□□ -0.64
TCF3-220ENST00000611869 ASCL3Q9NQ33 180 aa11.03□□□□□ -0.64
TCF3-220ENST00000611869 PTPRSQ13332 1948 aa11.03□□□□□ -0.64
TCF3-220ENST00000611869 KIAA1324LA8MWY0 1029 aaPredicted RBP11.02□□□□□ -0.64
TCF3-220ENST00000611869 KBTBD11O94819 623 aa11.02□□□□□ -0.64
TCF3-220ENST00000611869 DNM1P46Q6ZS02 220 aa11.02□□□□□ -0.64
TCF3-220ENST00000611869 PCGF1Q9BSM1 259 aa11.02□□□□□ -0.64
TCF3-220ENST00000611869 CLN5O75503 358 aa11.02□□□□□ -0.65
TCF3-220ENST00000611869 DKK1O94907 266 aa11.02□□□□□ -0.65
TCF3-220ENST00000611869 ANOS1P23352 680 aa11.02□□□□□ -0.65
TCF3-220ENST00000611869 RPL27AP46776 148 aaKnown RBP11.02□□□□□ -0.65
TCF3-220ENST00000611869 C20orf204Q6ZNR8 217 aa11.02□□□□□ -0.65
TCF3-220ENST00000611869 COLCA1Q6ZS62 124 aa11.02□□□□□ -0.65
TCF3-220ENST00000611869 MUC15Q8N387 334 aa11.02□□□□□ -0.65
TCF3-220ENST00000611869 PLSCR4Q9NRQ2 329 aa11.02□□□□□ -0.65
TCF3-220ENST00000611869 FUT9Q9Y231 359 aa11.02□□□□□ -0.65
TCF3-220ENST00000611869 CARHSP1Q9Y2V2 147 aaKnown RBP11.02□□□□□ -0.65
TCF3-220ENST00000611869 IGHV1-69-2A0A0G2JMI3 117 aa11.02□□□□□ -0.65
TCF3-220ENST00000611869 CEACAM18A8MTB9 384 aa11.02□□□□□ -0.65
TCF3-220ENST00000611869 CD55P08174 381 aa11.02□□□□□ -0.65
TCF3-220ENST00000611869 CTRB1P17538 263 aa11.02□□□□□ -0.65
TCF3-220ENST00000611869 PAX5Q02548 391 aa11.02□□□□□ -0.65
TCF3-220ENST00000611869 ZNF146Q15072 292 aa11.02□□□□□ -0.65
TCF3-220ENST00000611869 CTRB2Q6GPI1 263 aa11.02□□□□□ -0.65
TCF3-220ENST00000611869 PDPNQ86YL7 162 aa11.02□□□□□ -0.65
TCF3-220ENST00000611869 TMEM106BQ9NUM4 274 aa11.02□□□□□ -0.65
TCF3-220ENST00000611869 METRNQ9UJH8 293 aa11.02□□□□□ -0.65
TCF3-220ENST00000611869 HELTA6NFD8 242 aa11.02□□□□□ -0.65
TCF3-220ENST00000611869 CLEC3BP05452 202 aa11.02□□□□□ -0.65
TCF3-220ENST00000611869 PLA2G2CQ5R387 149 aa11.02□□□□□ -0.65
TCF3-220ENST00000611869 C10orf113Q5VZT2 155 aa11.02□□□□□ -0.65
TCF3-220ENST00000611869 RFNGQ9Y644 331 aa11.02□□□□□ -0.65
TCF3-220ENST00000611869 KBTBD11-OT1A0A1B0GTJ5 212 aa11.01□□□□□ -0.65
TCF3-220ENST00000611869 TFF3Q07654 80 aa11.01□□□□□ -0.65
TCF3-220ENST00000611869 ASCL4Q6XD76 172 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms