RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 TSPAN13O95857 204 aa3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 IGHG1P01857 330 aa3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 CLPSP04118 112 aa3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 CFIP05156 583 aa3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 CRYGCP07315 174 aa3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 PMCHP20382 165 aa3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 F2RP25116 425 aa3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 S100GP29377 79 aa3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 MC5RP33032 325 aa3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 GUCA1AP43080 201 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 FBXW4P57775 412 aa3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 FOXL2P58012 376 aa3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 ARF3P61204 181 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 PSG4Q00888 419 aa3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 HIST1H1AQ02539 215 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 HSD52Q0P140 79 aa3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 TMEM267Q0VDI3 215 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 MYBPHQ13203 477 aa3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 SRSF6Q13247 344 aaKnown RBP3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 NOGQ13253 232 aa3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 RAB31Q13636 194 aa3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 ELAVL3Q14576 367 aaKnown RBP3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 CLEC12BQ2HXU8 276 aa3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 HNRNPA1L2Q32P51 320 aaKnown RBP3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 MPV17L2Q567V2 206 aa3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 PSMG4Q5JS54 123 aa3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 PHYHD1Q5SRE7 291 aa3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 SLC25A34Q6PIV7 304 aa3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 CXCL17Q6UXB2 119 aa3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 WDR82Q6UXN9 313 aa3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 FOXI2Q6ZQN5 318 aa3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 Q6ZSR6 202 aa3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 FOXL2NBQ6ZUU3 175 aa3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 Q6ZVH6 145 aa3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 FAM58AQ8N1B3 248 aa3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 C17orf78Q8N4C9 275 aa3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 METTL27Q8N6F8 245 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 C5orf17Q8NAS9 161 aa3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 OR2M3Q8NG83 312 aa3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 OR10V1Q8NGI7 309 aa3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 OR10G7Q8NGN6 311 aa3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 OR11L1Q8NGX0 322 aa3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 C16orf52Q8NHV5 167 aa3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 OCC1Q8TAD7 63 aa3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 RDH5Q92781 318 aa3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 ADIPOR1Q96A54 375 aa3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 SARAFQ96BY9 339 aa3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 ZNF524Q96C55 264 aa3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 FER1L6-AS2Q96M78 137 aa3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 TMEM147Q9BVK8 224 aa3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 FAM60AQ9NP50 221 aa3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 PNRC2Q9NPJ4 139 aaKnown RBP3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 PHPT1Q9NRX4 125 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 SPANXA1Q9NS26 97 aa3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 TMEM74BQ9NUR3 256 aa3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 ZNF391Q9UJN7 358 aa3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 RNF24Q9Y225 148 aa3.39□□□□□ -1.87
HMGB1P50-201ENST00000605814 COL5A1P20908 1838 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 KIR2DS1A0A191URI9 304 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 A0A1W2PR80 420 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 SMIM27A0A1W2PRY6 76 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 PSMB11A5LHX3 300 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 A6NDN8 102 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 FRG2CA6NGY1 282 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 OR2T8A6NH00 312 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 DNAJC9-AS1A6NH13 148 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 SLC22A20A6NK97 555 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 SNURFLB1AK76 121 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 NPIPB11E5RHQ5 1161 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 C11orf98E9PRG8 122 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 G3V3Y1 287 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 H0Y8G0 127 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 J3QR89 54 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 K7EP34 96 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 BMPR1BO00238 502 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 ISLRO14498 428 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 SAP30O75446 220 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 NDUFB4O95168 129 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 NAPSAO96009 420 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 STATHP02808 62 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 FCGR2AP12318 317 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 AZU1P20160 251 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 CBLN1P23435 193 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 FKBP2P26885 142 aaKnown RBP3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 PTGDSP41222 190 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 CA7P43166 264 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 KIR2DS4P43632 304 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 OR1D4P47884 311 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 DUSP3P51452 185 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 SUMO3P55854 103 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 CLRN1P58418 232 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 UBE2G1P62253 170 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 ID2Q02363 134 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 MALLQ13021 153 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 KIR2DS1Q14954 304 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 RPEL1Q2QD12 228 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 PRTGQ2VWP7 1150 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 SLC25A53Q5H9E4 307 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 TSPO2Q5TGU0 170 aa3.38□□□□□ -1.87
HMGB1P50-201ENST00000605814 PLPP4Q5VZY2 271 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms