RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 MCTS1Q9ULC4 181 aaKnown RBP4.16□□□□□ -1.74
SPTBN1-206ENST00000602898 HS3ST2Q9Y278 367 aa4.16□□□□□ -1.74
SPTBN1-206ENST00000602898 K7EP34 96 aa4.16□□□□□ -1.74
SPTBN1-206ENST00000602898 SEC11BP0C7V7 166 aa4.16□□□□□ -1.74
SPTBN1-206ENST00000602898 ZNF286BP0CG31 522 aa4.16□□□□□ -1.74
SPTBN1-206ENST00000602898 AKAIN1P0CW23 69 aa4.16□□□□□ -1.74
SPTBN1-206ENST00000602898 CXCL8P10145 99 aa4.16□□□□□ -1.74
SPTBN1-206ENST00000602898 PRTN3P24158 256 aa4.16□□□□□ -1.74
SPTBN1-206ENST00000602898 CDKN2AP42771 156 aaKnown RBP4.16□□□□□ -1.74
SPTBN1-206ENST00000602898 OR1E2P47887 323 aa4.16□□□□□ -1.74
SPTBN1-206ENST00000602898 TCTAP57738 103 aa4.16□□□□□ -1.74
SPTBN1-206ENST00000602898 GNB2P62879 340 aa4.16□□□□□ -1.74
SPTBN1-206ENST00000602898 MPV17LQ2QL34 196 aa4.16□□□□□ -1.74
SPTBN1-206ENST00000602898 TMEM97Q5BJF2 176 aa4.16□□□□□ -1.74
SPTBN1-206ENST00000602898 ALG10Q5BKT4 473 aa4.16□□□□□ -1.74
SPTBN1-206ENST00000602898 MRPL54Q6P161 138 aaKnown RBP4.16□□□□□ -1.74
SPTBN1-206ENST00000602898 SPSB3Q6PJ21 355 aa4.16□□□□□ -1.74
SPTBN1-206ENST00000602898 OPN5Q6U736 354 aa4.16□□□□□ -1.74
SPTBN1-206ENST00000602898 PRSS41Q7RTY9 318 aa4.16□□□□□ -1.74
SPTBN1-206ENST00000602898 ARPC1AQ92747 370 aa4.16□□□□□ -1.74
SPTBN1-206ENST00000602898 FGF11Q92914 225 aa4.16□□□□□ -1.74
SPTBN1-206ENST00000602898 FGGYQ96C11 551 aa4.16□□□□□ -1.74
SPTBN1-206ENST00000602898 NOP16Q9Y3C1 178 aaKnown RBP4.16□□□□□ -1.74
SPTBN1-206ENST00000602898 INSIG2Q9Y5U4 225 aa4.16□□□□□ -1.74
SPTBN1-206ENST00000602898 TRAV8-6A0A0B4J262 113 aa4.15□□□□□ -1.74
SPTBN1-206ENST00000602898 M0R1X1 148 aa4.15□□□□□ -1.74
SPTBN1-206ENST00000602898 SOX14O95416 240 aa4.15□□□□□ -1.74
SPTBN1-206ENST00000602898 USF1P22415 310 aaPredicted RBP4.15□□□□□ -1.74
SPTBN1-206ENST00000602898 TAS2R20P59543 309 aa4.15□□□□□ -1.74
SPTBN1-206ENST00000602898 YPEL3P61236 119 aaPredicted RBP4.15□□□□□ -1.74
SPTBN1-206ENST00000602898 ARL9Q6T311 187 aa4.15□□□□□ -1.74
SPTBN1-206ENST00000602898 LCNL1Q6ZST4 164 aa4.15□□□□□ -1.74
SPTBN1-206ENST00000602898 COX8CQ7Z4L0 72 aa4.15□□□□□ -1.74
SPTBN1-206ENST00000602898 ZIC4Q8N9L1 334 aa4.15□□□□□ -1.74
SPTBN1-206ENST00000602898 DDIT4LQ96D03 193 aa4.15□□□□□ -1.74
SPTBN1-206ENST00000602898 ANAPC13Q9BS18 74 aa4.15□□□□□ -1.74
SPTBN1-206ENST00000602898 RNF126Q9BV68 326 aa4.15□□□□□ -1.74
SPTBN1-206ENST00000602898 PARLQ9H300 379 aa4.15□□□□□ -1.74
SPTBN1-206ENST00000602898 ACER3Q9NUN7 267 aa4.15□□□□□ -1.74
SPTBN1-206ENST00000602898 TIMM23O14925 209 aa4.15□□□□□ -1.75
SPTBN1-206ENST00000602898 NPIPB7O75200 414 aa4.15□□□□□ -1.75
SPTBN1-206ENST00000602898 GCM2O75603 506 aaPredicted RBP4.15□□□□□ -1.75
SPTBN1-206ENST00000602898 SP4Q02446 784 aa4.15□□□□□ -1.75
SPTBN1-206ENST00000602898 CKAP5Q14008 2032 aa4.15□□□□□ -1.75
SPTBN1-206ENST00000602898 TCEAL5Q5H9L2 206 aa4.15□□□□□ -1.75
SPTBN1-206ENST00000602898 TMEM78Q5T7P6 136 aa4.15□□□□□ -1.75
SPTBN1-206ENST00000602898 RPL7L1Q6DKI1 246 aaKnown RBP4.15□□□□□ -1.75
SPTBN1-206ENST00000602898 SLC18B1Q6NT16 456 aa4.15□□□□□ -1.75
SPTBN1-206ENST00000602898 FAM19A5Q7Z5A7 132 aaPredicted RBP4.15□□□□□ -1.75
SPTBN1-206ENST00000602898 B3GALNT2Q8NCR0 500 aa4.15□□□□□ -1.75
SPTBN1-206ENST00000602898 AQP3Q92482 292 aa4.15□□□□□ -1.75
SPTBN1-206ENST00000602898 GMPPAQ96IJ6 420 aaPredicted RBP4.15□□□□□ -1.75
SPTBN1-206ENST00000602898 GPR21Q99679 349 aa4.15□□□□□ -1.75
SPTBN1-206ENST00000602898 RTBDNQ9BSG5 229 aaPredicted RBP4.15□□□□□ -1.75
SPTBN1-206ENST00000602898 PRSS22Q9GZN4 317 aa4.15□□□□□ -1.75
SPTBN1-206ENST00000602898 MTFP1Q9UDX5 166 aa4.15□□□□□ -1.75
SPTBN1-206ENST00000602898 NAT8BQ9UHF3 227 aa4.15□□□□□ -1.75
SPTBN1-206ENST00000602898 R4GN57 208 aa4.15□□□□□ -1.75
SPTBN1-206ENST00000602898 PCNTO95613 3336 aa4.15□□□□□ -1.75
SPTBN1-206ENST00000602898 RBFOX3A6NFN3 312 aa4.15□□□□□ -1.75
SPTBN1-206ENST00000602898 C15orf65H3BRN8 121 aa4.15□□□□□ -1.75
SPTBN1-206ENST00000602898 SAP18O00422 153 aaKnown RBP4.15□□□□□ -1.75
SPTBN1-206ENST00000602898 ZIC3O60481 467 aa4.15□□□□□ -1.75
SPTBN1-206ENST00000602898 IGHG3P01860 377 aa4.15□□□□□ -1.75
SPTBN1-206ENST00000602898 IGHA1P01876 353 aa4.15□□□□□ -1.75
SPTBN1-206ENST00000602898 PFN1P07737 140 aaKnown RBP4.15□□□□□ -1.75
SPTBN1-206ENST00000602898 CD59P13987 128 aa4.15□□□□□ -1.75
SPTBN1-206ENST00000602898 PPIBP23284 216 aaKnown RBP4.15□□□□□ -1.75
SPTBN1-206ENST00000602898 LOXP28300 417 aaPredicted RBP4.15□□□□□ -1.75
SPTBN1-206ENST00000602898 RPL34P49207 117 aaKnown RBP4.15□□□□□ -1.75
SPTBN1-206ENST00000602898 RPL27P61353 136 aaKnown RBP4.15□□□□□ -1.75
SPTBN1-206ENST00000602898 EDDM3AQ14507 147 aa4.15□□□□□ -1.75
SPTBN1-206ENST00000602898 OR8B8Q15620 311 aa4.15□□□□□ -1.75
SPTBN1-206ENST00000602898 TIGITQ495A1 244 aa4.15□□□□□ -1.75
SPTBN1-206ENST00000602898 BVES-AS1Q5T3Y7 98 aa4.15□□□□□ -1.75
SPTBN1-206ENST00000602898 BHLHA9Q7RTU4 235 aa4.15□□□□□ -1.75
SPTBN1-206ENST00000602898 Q8N976 141 aa4.15□□□□□ -1.75
SPTBN1-206ENST00000602898 MAL2Q969L2 176 aa4.15□□□□□ -1.75
SPTBN1-206ENST00000602898 S100A16Q96FQ6 103 aaKnown RBP4.15□□□□□ -1.75
SPTBN1-206ENST00000602898 CHST6Q9GZX3 395 aa4.15□□□□□ -1.75
SPTBN1-206ENST00000602898 AAMDCQ9H7C9 122 aa4.15□□□□□ -1.75
SPTBN1-206ENST00000602898 TVP23BQ9NYZ1 205 aa4.15□□□□□ -1.75
SPTBN1-206ENST00000602898 RALYQ9UKM9 306 aaKnown RBP4.15□□□□□ -1.75
SPTBN1-206ENST00000602898 ZNF780BQ9Y6R6 833 aa4.15□□□□□ -1.75
SPTBN1-206ENST00000602898 ANK1P16157 1881 aa4.14□□□□□ -1.75
SPTBN1-206ENST00000602898 DIRC3C9JPN6 131 aa4.14□□□□□ -1.75
SPTBN1-206ENST00000602898 RRHO14718 337 aa4.14□□□□□ -1.75
SPTBN1-206ENST00000602898 SFT2D2O95562 160 aa4.14□□□□□ -1.75
SPTBN1-206ENST00000602898 NUDT3O95989 172 aa4.14□□□□□ -1.75
SPTBN1-206ENST00000602898 PLA2G1BP04054 148 aaKnown RBP4.14□□□□□ -1.75
SPTBN1-206ENST00000602898 H2BFMP0C1H6 154 aa4.14□□□□□ -1.75
SPTBN1-206ENST00000602898 CPMP14384 443 aa4.14□□□□□ -1.75
SPTBN1-206ENST00000602898 IGFBP3P17936 291 aaPredicted RBP4.14□□□□□ -1.75
SPTBN1-206ENST00000602898 KLK2P20151 261 aa4.14□□□□□ -1.75
SPTBN1-206ENST00000602898 RPL24P83731 157 aaKnown RBP4.14□□□□□ -1.75
SPTBN1-206ENST00000602898 FOXF2Q12947 444 aa4.14□□□□□ -1.75
SPTBN1-206ENST00000602898 ZNF322Q6U7Q0 402 aaPredicted RBP4.14□□□□□ -1.75
SPTBN1-206ENST00000602898 LINC00471Q8N535 108 aa4.14□□□□□ -1.75
SPTBN1-206ENST00000602898 PP6455Q8WZ26 134 aa4.14□□□□□ -1.75
SPTBN1-206ENST00000602898 MBD6Q96DN6 1003 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms