RNA–Protein interactions for RNA: ENST00000602190.1

IRF3-231, Transcript of interferon regulatory factor 3, human

TSL 3

Gene IRF3, Length 413 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-231	ENST00000602190	CMSS1	Q9BQ75	279 aa	Known RBP	13.58	□□□□□ -0.24
IRF3-231	ENST00000602190	FKBP14	Q9NWM8	211 aa		13.58	□□□□□ -0.24
IRF3-231	ENST00000602190	KCNK7	Q9Y2U2	307 aa		13.58	□□□□□ -0.24
IRF3-231	ENST00000602190	NPIPB5	A8MRT5	1133 aa		13.57	□□□□□ -0.24
IRF3-231	ENST00000602190	SLC17A2	O00624	439 aa		13.57	□□□□□ -0.24
IRF3-231	ENST00000602190	FABP7	O15540	132 aa		13.57	□□□□□ -0.24
IRF3-231	ENST00000602190	OR2J3	O76001	311 aa		13.57	□□□□□ -0.24
IRF3-231	ENST00000602190	CDK1	P06493	297 aa		13.57	□□□□□ -0.24
IRF3-231	ENST00000602190	CD3G	P09693	182 aa		13.57	□□□□□ -0.24
IRF3-231	ENST00000602190	SAA1	P0DJI8	122 aa	Predicted RBP	13.57	□□□□□ -0.24
IRF3-231	ENST00000602190	CBX3	Q13185	183 aa		13.57	□□□□□ -0.24
IRF3-231	ENST00000602190	TPBG	Q13641	420 aa		13.57	□□□□□ -0.24
IRF3-231	ENST00000602190	ANKRD55	Q3KP44	614 aa		13.57	□□□□□ -0.24
IRF3-231	ENST00000602190	IGSF11	Q5DX21	431 aa		13.57	□□□□□ -0.24
IRF3-231	ENST00000602190	RBM48	Q5RL73	367 aa	Known RBP	13.57	□□□□□ -0.24
IRF3-231	ENST00000602190	C10orf55	Q5SWW7	151 aa		13.57	□□□□□ -0.24
IRF3-231	ENST00000602190	FBLIM1	Q8WUP2	373 aa		13.57	□□□□□ -0.24
IRF3-231	ENST00000602190	S100A14	Q9HCY8	104 aa		13.57	□□□□□ -0.24
IRF3-231	ENST00000602190	PLCXD1	Q9NUJ7	323 aa		13.57	□□□□□ -0.24
IRF3-231	ENST00000602190	PSORS1C1	Q9UIG5	152 aa		13.57	□□□□□ -0.24
IRF3-231	ENST00000602190		A0A1B0GW64	132 aa		13.56	□□□□□ -0.24
IRF3-231	ENST00000602190	UBE2C	O00762	179 aa		13.56	□□□□□ -0.24
IRF3-231	ENST00000602190	SPRY2	O43597	315 aa		13.56	□□□□□ -0.24
IRF3-231	ENST00000602190	CRYZL1	O95825	349 aa		13.56	□□□□□ -0.24
IRF3-231	ENST00000602190	CRYGC	P07315	174 aa		13.56	□□□□□ -0.24
IRF3-231	ENST00000602190	MAP2K4	P45985	399 aa		13.56	□□□□□ -0.24
IRF3-231	ENST00000602190	TM4SF20	Q53R12	229 aa		13.56	□□□□□ -0.24
IRF3-231	ENST00000602190	SLC25A42	Q86VD7	318 aa		13.56	□□□□□ -0.24
IRF3-231	ENST00000602190	MMD2	Q8IY49	270 aa		13.56	□□□□□ -0.24
IRF3-231	ENST00000602190	UXS1	Q8NBZ7	420 aa		13.56	□□□□□ -0.24
IRF3-231	ENST00000602190	RNF183	Q96D59	192 aa		13.56	□□□□□ -0.24
IRF3-231	ENST00000602190	KIR2DL5B	A0A0G2JN68	375 aa		13.55	□□□□□ -0.24
IRF3-231	ENST00000602190	KIR2DL5B	A0A0G2JPC4	375 aa		13.55	□□□□□ -0.24
IRF3-231	ENST00000602190	MPPED1	O15442	326 aa		13.55	□□□□□ -0.24
IRF3-231	ENST00000602190	CREBL2	O60519	120 aa	Predicted RBP	13.55	□□□□□ -0.24
IRF3-231	ENST00000602190	FCGR3A	P08637	254 aa		13.55	□□□□□ -0.24
IRF3-231	ENST00000602190	KIR2DL5A	Q8N109	375 aa		13.55	□□□□□ -0.24
IRF3-231	ENST00000602190	KIR2DL5B	Q8NHK3	375 aa		13.55	□□□□□ -0.24
IRF3-231	ENST00000602190	ACOT12	Q8WYK0	555 aa		13.55	□□□□□ -0.24
IRF3-231	ENST00000602190	MARC2	Q969Z3	335 aa		13.55	□□□□□ -0.24
IRF3-231	ENST00000602190		E7EUB6	86 aa		13.54	□□□□□ -0.24
IRF3-231	ENST00000602190	MYL12B	O14950	172 aa		13.54	□□□□□ -0.24
IRF3-231	ENST00000602190	IL6R	P08887	468 aa	Predicted RBP	13.54	□□□□□ -0.24
IRF3-231	ENST00000602190	PSMB6	P28072	239 aa		13.54	□□□□□ -0.24
IRF3-231	ENST00000602190	APOC4	P55056	127 aa		13.54	□□□□□ -0.24
IRF3-231	ENST00000602190	OR4A47	Q6IF82	309 aa		13.54	□□□□□ -0.24
IRF3-231	ENST00000602190		Q6ZS49	121 aa		13.54	□□□□□ -0.24
IRF3-231	ENST00000602190	H1FOO	Q8IZA3	346 aa	Predicted RBP	13.54	□□□□□ -0.24
IRF3-231	ENST00000602190	OR10J5	Q8NHC4	309 aa		13.54	□□□□□ -0.24
IRF3-231	ENST00000602190	PHLDA1	Q8WV24	401 aa	Predicted RBP	13.54	□□□□□ -0.24
IRF3-231	ENST00000602190	FBXL7	Q9UJT9	491 aa		13.54	□□□□□ -0.24
IRF3-231	ENST00000602190	LSM2	Q9Y333	95 aa	Known RBP	13.54	□□□□□ -0.24
IRF3-231	ENST00000602190	SCAF4	O95104	1147 aa	Known RBP	13.53	□□□□□ -0.24
IRF3-231	ENST00000602190	ZNF735	P0CB33	412 aa		13.53	□□□□□ -0.24
IRF3-231	ENST00000602190	GSTT2	P0CG29	244 aa		13.53	□□□□□ -0.24
IRF3-231	ENST00000602190	GSTT2B	P0CG30	244 aa		13.53	□□□□□ -0.24
IRF3-231	ENST00000602190	GAL	P22466	123 aa		13.53	□□□□□ -0.24
IRF3-231	ENST00000602190	ARL3	P36405	182 aa		13.53	□□□□□ -0.24
IRF3-231	ENST00000602190	DEFB135	Q30KP9	77 aa		13.53	□□□□□ -0.24
IRF3-231	ENST00000602190	HSD17B12	Q53GQ0	312 aa		13.53	□□□□□ -0.24
IRF3-231	ENST00000602190	BTNL8	Q6UX41	500 aa		13.53	□□□□□ -0.24
IRF3-231	ENST00000602190	UNQ9165/PRO28630	Q6UXU0	137 aa		13.53	□□□□□ -0.24
IRF3-231	ENST00000602190	C19orf35	Q6ZS72	473 aa		13.53	□□□□□ -0.24
IRF3-231	ENST00000602190	OR56B1	Q8NGI3	324 aa		13.53	□□□□□ -0.24
IRF3-231	ENST00000602190	FYTTD1	Q96QD9	318 aa	Known RBP	13.53	□□□□□ -0.24
IRF3-231	ENST00000602190	SLC2A9	Q9NRM0	540 aa		13.53	□□□□□ -0.24
IRF3-231	ENST00000602190	SELENOK	Q9Y6D0	94 aa		13.53	□□□□□ -0.24
IRF3-231	ENST00000602190	HMX3	A6NHT5	357 aa		13.52	□□□□□ -0.25
IRF3-231	ENST00000602190	BET1	O15155	118 aa		13.52	□□□□□ -0.25
IRF3-231	ENST00000602190	CTRB1	P17538	263 aa		13.52	□□□□□ -0.25
IRF3-231	ENST00000602190	ELL	P55199	621 aa	Predicted RBP	13.52	□□□□□ -0.25
IRF3-231	ENST00000602190	PRR20E	P86478	221 aa		13.52	□□□□□ -0.25
IRF3-231	ENST00000602190	PRR20C	P86479	221 aa		13.52	□□□□□ -0.25
IRF3-231	ENST00000602190	PRR20D	P86480	221 aa		13.52	□□□□□ -0.25
IRF3-231	ENST00000602190	PRR20B	P86481	221 aa		13.52	□□□□□ -0.25
IRF3-231	ENST00000602190	PRR20A	P86496	221 aa		13.52	□□□□□ -0.25
IRF3-231	ENST00000602190	P2RY14	Q15391	338 aa		13.52	□□□□□ -0.25
IRF3-231	ENST00000602190	FAM106A	Q4KMX7	169 aa		13.52	□□□□□ -0.25
IRF3-231	ENST00000602190	CTRB2	Q6GPI1	263 aa		13.52	□□□□□ -0.25
IRF3-231	ENST00000602190	CLEC19A	Q6UXS0	136 aa		13.52	□□□□□ -0.25
IRF3-231	ENST00000602190	C10orf67	Q8IYJ2	551 aa		13.52	□□□□□ -0.25
IRF3-231	ENST00000602190	PUSL1	Q8N0Z8	303 aa	Known RBP	13.52	□□□□□ -0.25
IRF3-231	ENST00000602190	CYGB	Q8WWM9	190 aa		13.52	□□□□□ -0.25
IRF3-231	ENST00000602190	SPAG8	Q99932	426 aa	Predicted RBP	13.52	□□□□□ -0.25
IRF3-231	ENST00000602190	MFNG	O00587	321 aa		13.51	□□□□□ -0.25
IRF3-231	ENST00000602190	IRF3	Q14653	427 aa		13.51	□□□□□ -0.25
IRF3-231	ENST00000602190	ODF3L2	Q3SX64	289 aa		13.51	□□□□□ -0.25
IRF3-231	ENST00000602190	AHSA2	Q719I0	299 aa		13.51	□□□□□ -0.25
IRF3-231	ENST00000602190	OR2C3	Q8N628	320 aa		13.51	□□□□□ -0.25
IRF3-231	ENST00000602190	TMEM217	Q8N7C4	229 aa		13.51	□□□□□ -0.25
IRF3-231	ENST00000602190	OR1L6	Q8NGR2	347 aa		13.51	□□□□□ -0.25
IRF3-231	ENST00000602190	TMEM167A	Q8TBQ9	72 aa		13.51	□□□□□ -0.25
IRF3-231	ENST00000602190	OR51E2	Q9H255	320 aa		13.51	□□□□□ -0.25
IRF3-231	ENST00000602190	C5orf66	Q9H5L9	145 aa		13.51	□□□□□ -0.25
IRF3-231	ENST00000602190	MRPL27	Q9P0M9	148 aa	Known RBP	13.51	□□□□□ -0.25
IRF3-231	ENST00000602190	IGLV11-55	A0A075B6I3	123 aa		13.5	□□□□□ -0.25
IRF3-231	ENST00000602190	TSPAN4	O14817	238 aa		13.5	□□□□□ -0.25
IRF3-231	ENST00000602190	ACTL6B	O94805	426 aa		13.5	□□□□□ -0.25
IRF3-231	ENST00000602190	IGLV2-14	P01704	120 aa		13.5	□□□□□ -0.25
IRF3-231	ENST00000602190	MAS1L	P35410	378 aa		13.5	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 128.9 ms