RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 EXOSC2Q13868 293 aaKnown RBP9.98□□□□□ -0.81
RPS28-204ENST00000602140 TBCEQ15813 527 aaPredicted RBP9.98□□□□□ -0.81
RPS28-204ENST00000602140 C10orf55Q5SWW7 151 aa9.98□□□□□ -0.81
RPS28-204ENST00000602140 ADAMTSL5Q6ZMM2 481 aa9.98□□□□□ -0.81
RPS28-204ENST00000602140 Q6ZS49 121 aa9.98□□□□□ -0.81
RPS28-204ENST00000602140 ZNF367Q7RTV3 350 aa9.98□□□□□ -0.81
RPS28-204ENST00000602140 FAM223AQ8IWN6 122 aa9.98□□□□□ -0.81
RPS28-204ENST00000602140 DCUN1D5Q9BTE7 237 aa9.98□□□□□ -0.81
RPS28-204ENST00000602140 ATG5Q9H1Y0 275 aa9.98□□□□□ -0.81
RPS28-204ENST00000602140 TRBV9A0A0B4J1U6 114 aa9.97□□□□□ -0.81
RPS28-204ENST00000602140 AIREO43918 545 aa9.97□□□□□ -0.81
RPS28-204ENST00000602140 CREBL2O60519 120 aaPredicted RBP9.97□□□□□ -0.81
RPS28-204ENST00000602140 FCGR3BO75015 233 aa9.97□□□□□ -0.81
RPS28-204ENST00000602140 CDK10Q15131 360 aa9.97□□□□□ -0.81
RPS28-204ENST00000602140 ZNF645Q8N7E2 425 aa9.97□□□□□ -0.81
RPS28-204ENST00000602140 OR2K2Q8NGT1 345 aa9.97□□□□□ -0.81
RPS28-204ENST00000602140 SPIN2AQ99865 258 aa9.97□□□□□ -0.81
RPS28-204ENST00000602140 SPIN2BQ9BPZ2 258 aa9.97□□□□□ -0.81
RPS28-204ENST00000602140 PLEKHA3Q9HB20 300 aa9.97□□□□□ -0.81
RPS28-204ENST00000602140 STARD9Q9P2P6 4700 aa9.97□□□□□ -0.81
RPS28-204ENST00000602140 DNAH1Q9P2D7 4330 aa9.96□□□□□ -0.81
RPS28-204ENST00000602140 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.96□□□□□ -0.82
RPS28-204ENST00000602140 TRDV1A0A1B0GX56 115 aa9.96□□□□□ -0.82
RPS28-204ENST00000602140 SMIM30A4D0T7 59 aa9.96□□□□□ -0.82
RPS28-204ENST00000602140 TUSC2O75896 110 aa9.96□□□□□ -0.82
RPS28-204ENST00000602140 NFYAP23511 347 aaPredicted RBP9.96□□□□□ -0.82
RPS28-204ENST00000602140 DTYMKP23919 212 aa9.96□□□□□ -0.82
RPS28-204ENST00000602140 CD81P60033 236 aa9.96□□□□□ -0.82
RPS28-204ENST00000602140 CD300EQ496F6 205 aaPredicted RBP9.96□□□□□ -0.82
RPS28-204ENST00000602140 CDNFQ49AH0 187 aa9.96□□□□□ -0.82
RPS28-204ENST00000602140 OR2B11Q5JQS5 317 aa9.96□□□□□ -0.82
RPS28-204ENST00000602140 KCTD9Q7L273 389 aa9.96□□□□□ -0.82
RPS28-204ENST00000602140 NR2C2APQ86WQ0 139 aa9.96□□□□□ -0.82
RPS28-204ENST00000602140 MMD2Q8IY49 270 aa9.96□□□□□ -0.82
RPS28-204ENST00000602140 TTC9CQ8N5M4 171 aa9.96□□□□□ -0.82
RPS28-204ENST00000602140 NECAP1Q8NC96 275 aa9.96□□□□□ -0.82
RPS28-204ENST00000602140 CNBD2Q96M20 576 aa9.96□□□□□ -0.82
RPS28-204ENST00000602140 ST6GALNAC5Q9BVH7 336 aa9.96□□□□□ -0.82
RPS28-204ENST00000602140 RETNQ9HD89 108 aa9.96□□□□□ -0.82
RPS28-204ENST00000602140 NDUFB11Q9NX14 153 aa9.96□□□□□ -0.82
RPS28-204ENST00000602140 PRELID3BQ9Y3B1 194 aa9.96□□□□□ -0.82
RPS28-204ENST00000602140 OR2W1Q9Y3N9 320 aa9.96□□□□□ -0.82
RPS28-204ENST00000602140 CEPT1Q9Y6K0 416 aa9.96□□□□□ -0.82
RPS28-204ENST00000602140 LYSTQ99698 3801 aa9.95□□□□□ -0.82
RPS28-204ENST00000602140 HMX3A6NHT5 357 aa9.95□□□□□ -0.82
RPS28-204ENST00000602140 PPP5D1E7EU14 171 aa9.95□□□□□ -0.82
RPS28-204ENST00000602140 OR2J3O76001 311 aa9.95□□□□□ -0.82
RPS28-204ENST00000602140 TPPPO94811 219 aa9.95□□□□□ -0.82
RPS28-204ENST00000602140 RPL30P62888 115 aaKnown RBP9.95□□□□□ -0.82
RPS28-204ENST00000602140 ARL6IP1Q15041 203 aa9.95□□□□□ -0.82
RPS28-204ENST00000602140 C15orf32Q32M92 178 aa9.95□□□□□ -0.82
RPS28-204ENST00000602140 C22orf42Q6IC83 251 aa9.95□□□□□ -0.82
RPS28-204ENST00000602140 VKORC1L1Q8N0U8 176 aa9.95□□□□□ -0.82
RPS28-204ENST00000602140 DYNLRB2Q8TF09 96 aa9.95□□□□□ -0.82
RPS28-204ENST00000602140 KCTD12Q96CX2 325 aaKnown RBP9.95□□□□□ -0.82
RPS28-204ENST00000602140 NEURL2Q9BR09 285 aa9.95□□□□□ -0.82
RPS28-204ENST00000602140 HIPK2Q9H2X6 1198 aa9.95□□□□□ -0.82
RPS28-204ENST00000602140 BLOC1S6Q9UL45 172 aa9.95□□□□□ -0.82
RPS28-204ENST00000602140 MRPS7Q9Y2R9 242 aaKnown RBP9.95□□□□□ -0.82
RPS28-204ENST00000602140 RBMX2Q9Y388 322 aaKnown RBP9.95□□□□□ -0.82
RPS28-204ENST00000602140 TNCP24821 2201 aa9.94□□□□□ -0.82
RPS28-204ENST00000602140 IGKV1D-13A0A0B4J2D9 117 aa9.94□□□□□ -0.82
RPS28-204ENST00000602140 ZNF785A8K8V0 405 aa9.94□□□□□ -0.82
RPS28-204ENST00000602140 SLC22A5O76082 557 aa9.94□□□□□ -0.82
RPS28-204ENST00000602140 IGLV2-14P01704 120 aa9.94□□□□□ -0.82
RPS28-204ENST00000602140 HLA-AP01891 365 aaKnown RBP9.94□□□□□ -0.82
RPS28-204ENST00000602140 HLA-DQB1P01920 261 aa9.94□□□□□ -0.82
RPS28-204ENST00000602140 CD7P09564 240 aa9.94□□□□□ -0.82
RPS28-204ENST00000602140 CTXN2P0C2S0 81 aa9.94□□□□□ -0.82
RPS28-204ENST00000602140 IGKV1-13P0DP09 117 aa9.94□□□□□ -0.82
RPS28-204ENST00000602140 CD36P16671 472 aa9.94□□□□□ -0.82
RPS28-204ENST00000602140 DEFB114Q30KQ6 69 aa9.94□□□□□ -0.82
RPS28-204ENST00000602140 HACD4Q5VWC8 232 aa9.94□□□□□ -0.82
RPS28-204ENST00000602140 LINC00322Q6ZN03 302 aaPredicted RBP9.94□□□□□ -0.82
RPS28-204ENST00000602140 C19orf35Q6ZS72 473 aa9.94□□□□□ -0.82
RPS28-204ENST00000602140 SLC25A42Q86VD7 318 aa9.94□□□□□ -0.82
RPS28-204ENST00000602140 LAX1Q8IWV1 398 aa9.94□□□□□ -0.82
RPS28-204ENST00000602140 NUDCD2Q8WVJ2 157 aa9.94□□□□□ -0.82
RPS28-204ENST00000602140 FAM110AQ9BQ89 295 aa9.94□□□□□ -0.82
RPS28-204ENST00000602140 OR51E2Q9H255 320 aa9.94□□□□□ -0.82
RPS28-204ENST00000602140 SLC2A8Q9NY64 477 aa9.94□□□□□ -0.82
RPS28-204ENST00000602140 ZNF257Q9Y2Q1 563 aa9.94□□□□□ -0.82
RPS28-204ENST00000602140 RBMY1BA6NDE4 496 aaKnown RBP9.93□□□□□ -0.82
RPS28-204ENST00000602140 RBMY1EA6NEQ0 496 aaKnown RBP9.93□□□□□ -0.82
RPS28-204ENST00000602140 TMEM235A6NFC5 223 aa9.93□□□□□ -0.82
RPS28-204ENST00000602140 C2orf70A6NJV1 201 aa9.93□□□□□ -0.82
RPS28-204ENST00000602140 TEX22C9J3V5 150 aa9.93□□□□□ -0.82
RPS28-204ENST00000602140 GGCTO75223 188 aaKnown RBP9.93□□□□□ -0.82
RPS28-204ENST00000602140 OR2C1O95371 312 aa9.93□□□□□ -0.82
RPS28-204ENST00000602140 RBMY1DP0C7P1 496 aaKnown RBP9.93□□□□□ -0.82
RPS28-204ENST00000602140 FOLR2P14207 255 aa9.93□□□□□ -0.82
RPS28-204ENST00000602140 EDN2P20800 178 aa9.93□□□□□ -0.82
RPS28-204ENST00000602140 GALP22466 123 aa9.93□□□□□ -0.82
RPS28-204ENST00000602140 GUCA2BQ16661 112 aa9.93□□□□□ -0.82
RPS28-204ENST00000602140 FAM209BQ5JX69 171 aa9.93□□□□□ -0.82
RPS28-204ENST00000602140 IZUMO2Q6UXV1 221 aa9.93□□□□□ -0.82
RPS28-204ENST00000602140 DEFB125Q8N687 156 aa9.93□□□□□ -0.82
RPS28-204ENST00000602140 OR4S2Q8NH73 311 aa9.93□□□□□ -0.82
RPS28-204ENST00000602140 VSTM2AQ8TAG5 236 aa9.93□□□□□ -0.82
RPS28-204ENST00000602140 TCTEX1D2Q8WW35 142 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms